cluster # 6782

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Oryza sativa
cluster # 6782 cluster # 6782 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6782#0 length = 590 sequences # 4

consensusID : consensus_6782#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 590
fasta sequence

                              [ATCGACGACCGGAGACTTTGTTGTGGTACTCCGCCTGATTGCGAGTGGAAAGCTCAGNCGGGGAACACCTGCGCCGCGTCATTCGACTGGAGATGC-AGCGGCATATGCAACTCGGAGGGGAGGATCTGGGAGGTGCACAATAAGTGCGCCGAAGGGGAGAAGGCGCTTTGGAACGC-AACCTTCTAGCGTG-ACCGAAACAACCGGTCAAACAAAAAAAAGGAAAAAACCGGAAGCACAAGCAGGAACTTCCTCCTGCTTATAGTAGGTGTGCTGTACATTGGCCACGGTCTGTTTGTATGTAATTCTTGTGTAGTTTTTAGCTGTGATGATTCGTTTCTGTAACTGGGTCTGGATGAACACCGACGAAGCGGACCACAATTTTACGTAGCGTCTGTCTGCCGGTGGCGGTGAAGGAGGTGGGTATACCAG---------CTGATATTGCATTCTTTGGAGAAGAGGTAAAATG--TTTTTGAGTTTTTTGAGGTGGTCATTTTGTATCGATCTCCTGTACTGTATACTGTATATGGCTGCCATGATGTATGACCAAAATAAAACTTACCTGATGATGCTTCATTTCGATGACTAAAAAAAAA]

[+] EMBL AU091753             [ATCGACGACCGGAGACTTTGTTGTGGTACTCCGCCTGATTGCGAGTGGAAAGCTCAGNCGGGGAACACCTGCGCCGCGTCATTCGACTGGAGATGC AGCGGCATATGCAACTCGGAGGGGAGGATCTGGGAGGTGCACAATAAGTGCGCCGAAGGGGAGAAGGCGCTTTGGAACGC AACCTTCTAGCGTG ACCGAAACAACCGGTCAAACAAAAAAAAGGAAAAAACCGGAAGCACAAGCAGGAACTTCCTCCTGCTTATAGTAGGTGTGCTGTACATTGGCCACGGTCTGTTTGTATGTAATTCTTGTGTAGTTTTTAGCTGTGATGATTCGTTTCTGTAACTGGGTCTGGATGAACACCGACGAAGCGGACCACAATTTTACGTAGCGTCTGTCTGCCGGTGGCGGTGAAGGAGGTGGGTATACCAG         CTGATATTGCATTCTTTGGAGAAGAGGTAAAATG  TTTTTGAGTTTTTTGAGGTGGTCATTTTGTATCGATCTCCTGTACTGTATACTGTATATGGCTGCCATGATGTATGACCAAAATAAAACTTACCTGATGATGCTTCATTTCGATGACTAAAAAAAAA]
[+] EMBL AK063785             [ATCGACGACCGGAGACTTTGTTGTGGTACTCCGCCTGATTGCGAGTGGAAAGCTCAGGCGGGGAACACCTGCGCCGCGTCATTCGACTGGAGATGC AGCGGCATATGCAACTCGGAGGGGAGGATCTGGGAGGTGCACAATAAGTGCGCCGAAGGGGAGAAGGCGCTTTGGAACGC AACCTTCTAGCGTG ACCGAAACAACCGGTCAAACAAAAAAAAGGAAAAAACCGGAAGCACAAGCAGGAACTTCCTCCTGCTTATAGTAGGTGTGCTGTACATTGGCCACGGTCTGTTTGTATGTAATTCTTGTGTAGTTTTTAGCTGTGATGATTCGTTTCTGTAACTGGGTCTGGATGAACACCGACGAAGCGGACCACAATTTTACGTAGCGTCTGTCTGCCGGTGGCGGTGAAGGAGGTGGGTATACCAG         CTGATATTGCATTCTTTGGAGAAGAGGTAAAATG  TTTTTGAGTTTTTTGAGGTGGTCATTTTGTATCGATCTCCTGTACTGTATACTGTATATGGCTGCCATGATGTATGACCAAAATAAAACTTACCTG                               ]
[+] EMBL BI808944             [                                                              GAA ACCTGCGCCGC TCATTCGACTGGAGATCCAACCGCCATATCCAACTCGGAGGGGAGAATCTGGGAGGTGCACAATAAGTGCGCCGAAGGGGAGAAGGCGCTTTGGAACGC AACCTTCTAGCGCGTACCGAAACAACCGGTCAAA AAAAAAGAAGAAAAAACCTGAAGCACAAGCAGGAGCTTCCTCCTGCTTATAGTAGGTGTGCTGTACATTGGCCACGGTCTGTTTGTATGTAATTCTTGTGTAGTTTTTAGCTGTGATGATTCGTTCCTGTAACTGGGTCTGGATGAACACCGACGAAGCGGACCACAATTTTACGTAGCGTCTGTCTGCCGGT GCGGTGGAGGTGGTGGGTATACCAGCTGATAAGCCTGATATTGCATTCTTTGGAGAAGAGGTAAAATGTATTTTTGAGCTTTTTGAGGTGGTCATTTTGTATCGATCTCCTGTACTGTATACTGTACATGGCTGCCATGATGTATGACCAAAATAAAACTTACCTGATGATGCTTCATTTCaaaaa           ]
[+] EMBL BI796810             [                                                               AACACCTGCGCCGCGTCATTCGACTGGAGAT C A CGGCATATCCAACTCGGAGGGGAGGATCTGGGAGGTGCACAATAAGTGCGCCGAAGGGGAGAAGGCGCTTTGGAACGCAAACCTTCTAGCGCG ACCGAAACAACCGGTCAAA AAAAAAGAAGAAAAAACCTGAAGCACAAGCAGGAGCTTCCTCCTGCTTATAGTAGGTGTGCTGTACATTGGCCACGGTCTGTTTGTATGTAATTCTTGTGTAGTTTTTAGCTGTGATGATTCGTTCCTGTAACTGGGTCTGGATGAACACCGACGAAGCGGACCACAATTTTACGTAGCGTCTGTCTGCCGGTGGCGGTGGAGGTGGTGGGTATACCAGCTGATAAGCCTGATATTGCATTCTTTGGAGAAGAGGTAAAATGTATTTTTGAGCTTTTTGAGGTGGTCATTTTGTATCGATCTCCTGTACTGTATACTGTACATGGCTGCCATGATGTATGACCAAAATAAAACTTACCTGATGATGCTTCAaaaa                ]




>consensus_6782#0
ATCGACGACCGGAGACTTTGTTGTGGTACTCCGCCTGATTGCGAGTGGAAAGCTCAGNCG
GGGAACACCTGCGCCGCGTCATTCGACTGGAGATGCAGCGGCATATGCAACTCGGAGGGG
AGGATCTGGGAGGTGCACAATAAGTGCGCCGAAGGGGAGAAGGCGCTTTGGAACGCAACC
TTCTAGCGTGACCGAAACAACCGGTCAAACAAAAAAAAGGAAAAAACCGGAAGCACAAGC
AGGAACTTCCTCCTGCTTATAGTAGGTGTGCTGTACATTGGCCACGGTCTGTTTGTATGT
AATTCTTGTGTAGTTTTTAGCTGTGATGATTCGTTTCTGTAACTGGGTCTGGATGAACAC
CGACGAAGCGGACCACAATTTTACGTAGCGTCTGTCTGCCGGTGGCGGTGAAGGAGGTGG
GTATACCAGCTGATATTGCATTCTTTGGAGAAGAGGTAAAATGTTTTTGAGTTTTTTGAG
GTGGTCATTTTGTATCGATCTCCTGTACTGTATACTGTATATGGCTGCCATGATGTATGA
CCAAAATAAAACTTACCTGATGATGCTTCATTTCGATGACTAAAAAAAAA

clustalw multiple alignements is not computed in this case