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Oryza sativa
cluster # 6790 cluster # 6790       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6790#0 length = 1798 sequences # 3  
consensus_6790#1 length = 577 sequences # 1  

consensusID : consensus_6790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1798
fasta sequence
                              [TCAGTCAGTTCCACACCTCTCCTTCCTTTAATTTCTCTCTGCTCGCCGGAGACAGACTAGCTTAGCTAGTAGGAGAGGGAGGAACTAATGGCCGCCGGAGACAAGACCGGCGGCGACGACGCTGCGGCGGCGGCGGCGGCGCCATTGCTGGTGTCGGCGGCGGGGAGGCGGCGGCGGTGCCCCGGGTGCCTGACGGAGGAGAGGTGCAAGGCCGACGCCGGCATCCCCTACCTCAACTTCTTCTACATCTGGGTCGTCTGCCTCTGCTCCTCGTTGCCAATTCAGTCGTTGTTTCCGTATCTGTACTTCATGATCAGGGACTTGAAAGTCGCAAAGGAAGAGCAAGATATTGGGTTCTATGCCGGTTTTGTCGGGGCTACTTATTTCCTTGGAAGAACTATCAGTGCAGTGCCATGGGGCATTTTTGCTGACAAATATGGGAGGAAGCCCTGCATTGTGATCAGTATCCTCTCAGTGATTGTGTTTAACACACTCTTTGGCCTCAGCACGACTTACTGGATGGCAATTGTTACCAGGGGATTACTTGGATTACTCTGTGGTATACTAGGACCAATCAAGGCCTATGCTTCAGAGGTCTGCAGGAAGGAGCACCAAGCTCTTGGAATTTCCCTTGTCACATCCTCGCGAGCAATAGCTCTGGTTGTTGGACCAGCTATTGGAGGATTTCTTTCGCAGCCTGCAAAGAAATACCCAAATCTTTTCTCTGAAGAATCGGTATTTGGGAGGTTTCCCTACTTTCTCCCTTGCTTCGTCATATCGGTACTAGCAGCAGGAGCATGTGTTGCGTGTATTTGGCTTCCGGAAACCCTGCACATGCACCATGATGACAAAGAAGTCATTGATGCACTAGAGGCACAAGATGCGACTTCAGACTTAGGAGAAACAACTAAAGAATCAGGATCAGGGAGAATGGGCCATACAAAGAGTTTGCTGAAGAACTGGCAGCTGATGTCAGCAATTACCCTCTACTGTGTCTTCTCTCTCCATGATACAGCTTATCTTGAGATATTTTCACTCTGGGCTGTGAGCAGCAGAAAATACCGGGGCCTGAGTTTTACATCCCAGGATGTTGGTATCGTGCTAGCTATTTCCGGTTTTGGTGTTTTGGTGTACCAACTTGCGATTTATCCGCTTCTTGCTAAATATGTTGGGCCAATCAAGCCATTCCGTTATGCAGCGGTCTTGTCTATACTTCTCCTTTCAACATATCCATTCATGGCTAACCTGTATGGTCTGGAGCTCAAAGTACTCATCAACATTGCTTCGCTTTTGAAAAATATGTTCGCTGCTACAATTACTATTGCATGCAACATCCTGCAAAACACTGCAGTGACGCAAGAACAAAGAGGGGTTGCAAATGGAATCTCTGTCACTCTGATGTCAATCTTCAAAGCCGTAGCTCCAGCAGCAGCTGGAATTTTGTTTTCATGGGCGCAAAAGCACATTACTGGGTTGTTCTTACCAGGTGAGCAGATCCTGTTCCTGATGCTGAACATGGTGTCAGTGATTGGGTTCATCCTGACATTCAAGCCATTTTTCGCCTTGCCGGATATGCGATGATGTGTAGTTAGGTAACAAAAAGGCCAGAATTTATCAGACTTCAGCCTGGATTCTAACCTGCAAGAGGAATTCATGTACTGTACCGCGTGTAATGTTCAGTTGTGTAATCAGTTTGGTGGTATCTTTGATTTCTGTCTGAACTCCGAACCATTGGATGGTCGAGGCATATGATAAACAGCTAACGGGATCTTGTTTCATCTAAAAAAAAAAAAAAAAA]

[+] EMBL AK065048             [TCAGTCAGTTCCACACCTCTCCTTCCTTTAATTTCTCTCTGCTCGCCGGAGACAGACTAGCTTAGCTAGTAGGAGAGGGAGGAACTAATGGCCGCCGGAGACAAGACCGGCGGCGACGACGCTGCGGCGGCGGCGGCGGCGCCATTGCTGGTGTCGGCGGCGGGGAGGCGGCGGCGGTGCCCCGGGTGCCTGACGGAGGAGAGGTGCAAGGCCGACGCCGGCATCCCCTACCTCAACTTCTTCTACATCTGGGTCGTCTGCCTCTGCTCCTCGTTGCCAATTCAGTCGTTGTTTCCGTATCTGTACTTCATGATCAGGGACTTGAAAGTCGCAAAGGAAGAGCAAGATATTGGGTTCTATGCCGGTTTTGTCGGGGCTACTTATTTCCTTGGAAGAACTATCAGTGCAGTGCCATGGGGCATTTTTGCTGACAAATATGGGAGGAAGCCCTGCATTGTGATCAGTATCCTCTCAGTGATTGTGTTTAACACACTCTTTGGCCTCAGCACGACTTACTGGATGGCAATTGTTACCAGGGGATTACTTGGATTACTCTGTGGTATACTAGGACCAATCAAGGCCTATGCTTCAGAGGTCTGCAGGAAGGAGCACCAAGCTCTTGGAATTTCCCTTGTCACATCCTCGCGAGCAATAGCTCTGGTTGTTGGACCAGCTATTGGAGGATTTCTTTCGCAGCCTGCAAAGAAATACCCAAATCTTTTCTCTGAAGAATCGGTATTTGGGAGGTTTCCCTACTTTCTCCCTTGCTTCGTCATATCGGTACTAGCAGCAGGAGCATGTGTTGCGTGTATTTGGCTTCCGGAAACCCTGCACATGCACCATGATGACAAAGAAGTCATTGATGCACTAGAGGCACAAGATGCGACTTCAGACTTAGGAGAAACAACTAAAGAATCAGGATCAGGGAGAATGGGCCATACAAAGAGTTTGCTGAAGAACTGGCAGCTGATGTCAGCAATTACCCTCTACTGTGTCTTCTCTCTCCATGATACAGCTTATCTTGAGATATTTTCACTCTGGGCTGTGAGCAGCAGAAAATACCGGGGCCTGAGTTTTACATCCCAGGATGTTGGTATCGTGCTAGCTATTTCCGGTTTTGGTGTTTTGGTGTACCAACTTGCGATTTATCCGCTTCTTGCTAAATATGTTGGGCCAATCAAGCCATTCCGTTATGCAGCGGTCTTGTCTATACTTCTCCTTTCAACATATCCATTCATGGCTAACCTGTATGGTCTGGAGCTCAAAGTACTCATCAACATTGCTTCGCTTTTGAAAAATATGTTCGCTGCTACAATTACTATTGCATGCAACATCCTGCAAAACACTGCAGTGACGCAAGAACAAAGAGGGGTTGCAAATGGAATCTCTGTCACTCTGATGTCAATCTTCAAAGCCGTAGCTCCAGCAGCAGCTGGAATTTTGTTTTCATGGGCGCAAAAGCACATTACTGGGTTGTTCTTACCAGGTGAGCAGATCCTGTTCCTGATGCTGAACATGGTGTCAGTGATTGGGTTCATCCTGACATTCAAGCCATTTTTCGCCTTGCCGGATATGCGATGATGTGTAGTTAGGTAACAAAAAGGCCAGAATTTATCAGACTTCAGCCTGGATTCTAACCTGCAAGAGGAATTCATGTACTGTACCGCGTGTAATGTTCAGTTGTGTAATCAGTTTGGTGGTATCTTTGATTTCTGTCTGAACTCCGAACCATTGGATGGTCGAGGCATATGATAAACAGCTAACGGGATCT                           ]
[+] EMBL AF543418             [    TCAGTTCCACACCTCTCCTTCCTTTAATTTCTCTCTGCTCGCCGGAGACAGACTAGCTTAGCTAGTAGGAGAGGGAGGAACTAATGGCCGCCGGAGACAAGGCCGGCGGCGACGACGCTGCGGCGGCGGCGGCGGCGCCATTGCTGGTGTCGGCGGCGGGGAGGCGGCGGCGGTGCCCCGGGTGCCTGACGGAGGAGAGGTGCAAGGCCGACGCCGGCATCCCCTACCTCAACTTCTTCTACATCTGGGTCGTCTGCCTCTGCTCCTCGTTGCCAATTCAGTCGTTGTTTCCGTATCTGTACTTCATGATCAGGGACTTGAAAGTCGCAAAGGAAGAGCAAGATATTGGGTTCTATGCCGGTTTTGTCGGGGCTACTTATTTCCTTGGAAGAACTATCAGTGCAGTGCCATGGGGCATTTTTGCTGACAAATATGGGAGGAAGCCCTGCATTGTGATCAGTATCCTCTCAGTGATTGTGTTTAACACACTCTTTGGCCTCAGCACGACTTACTGGATGGCAATTGTTACCAGGGGATTACTTGGATTACTCTGTGGTATACTAGGACCAATCAAGGCCTATGCTTCAGAGGTCTGCAGGAAGGAGCACCAAGCTCTTGGAATTTCCCTTGTCACATCCTCGCGAGCAATAGCTCTGGTTGTTGGACCAGCTATTGGAGGATTTCTTTCGCAGCCTGCAAAGAAATACCCAAATCTTTTCTCTGAAGAATCGGTATTTGGGAGGTTTCCCTACTTTCTCCCTTGCTTCGTCATATCGGTACTAGCAGCAGGAGCATGTGTTGCGTGTATTTGGCTTCCGGAAACCCTGCACATGCACCATGATGACAAAGAAGTCATTGATGCACTAGAGGCACAAGATGCGACTTCAGACTTAGGAGAAACAACTAAAGAATCAGGATCAGGGAGAATGGGCCATACAAAGAGTTTGCTGAAGAACTGGCAGCTGATGTCAGCAATTACCCTCTACTGTGTCTTCTCTCTCCATGATACAGCTTATCTTGAGATATTTTCACTCTGGGCTGTGAGCAGCAGAAAATACCGGGGCCTGAGTTTTACATCCCAGGATGTTGGTATCGTGCTAGCTATTTCCGGTTTTGGTGTTTTGGTGTACCAACTTGCGATTTATCCGCTTCTTGCTAAATATGTTGGGCCAATCAAGCCATTCCGTTATGCAGCGGTCTTGTCTATACTTCTCCTTTCAACATATCCATTCATGGCTAACCTGTATGGTCTGGAGCTCAAAGTACTCATCAACATTGCTTCGCTTTTGAAAAATATGTTCGCTGCTACAATTACTATTGCATGCAACATCCTGCAAAACACTGCAGTGACGCAAGAACAAAGAGGGGTTGCAAATGGAATCTCTGTCACTCTGATGTCAATCTTCAAAGCCGTAGCTCCAGCAGCAGCTGGAATTTTGTTTTCATGGGCGCAAAAGCACATTACTGGGTTGTTCTTACCAGGTGAGCAGATCCTGTTCCTGATGCTGAACATGGTGTCAGTGATTGGGTTCATCCTGACATTCAAGCCATTTTTCGCCTTGCCGGATATGCGATGATGTGTAGTTAGGTAACAAAAAGGCCAGAATTTATCAGACTTCAGCCTGGATTCTAACCTGCAAGAGGAATTCATGTACTGTACCGCGTGTAATGTTCAGTTGTGTAATCAGTTTGGTGGTATCTTTGATTTCTGTCTGAACTCCGAACCATTGGATGGTCGAGGCATATGATAAACAGCTAACGGGATCTTGTTTCATCTAAAAAAAAAAAAAAAAA]
[+] EMBL BI812792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCATTCCG TATGCA CGGTCTTGTCTATACTTCTCCTTTCAACATATCCATTCAT GCTAACCTGTATGTTCTGGAGCTCAAAGTACTCATCAACATTGCTTCGCTTTTGAAAAATATGTTCGCTGCTACCATTACTATTGCATGCAACATCCTGC AAACCCTGCAGTGACGCAAGAACCAAGAGGGGTTGCAAATGGAATCTCTGTCACTCTGATGTCAATCTTCAAAGCCGTAGCTCCAGCAGCAGCTGGAATTTTGTTTTCATGGGCGCAAAAGCACATTACTGGGTTGTTCTTACCAGGTGAGCAGATCCTGTTCCTGATGCTGAACATGGTGTCAGTGATTGGGTTCATCCTGACATTCAAGCCATTTTTCGCCTTGCCGGATATGCGATGATGTTTAGTTAGGTAAC AAAAGGCCAGAATTTATCAGATTTCAGCCTGGATTCTAACCTGCAAGAGGAATTCATGTACTGTACCGCGTGTAATGTTCAGTTGTGTAATCCGTTTGGTGGTATCTTTGATTTCaaaaa                                                                                ]


>consensus_6790#0 TCAGTCAGTTCCACACCTCTCCTTCCTTTAATTTCTCTCTGCTCGCCGGAGACAGACTAG CTTAGCTAGTAGGAGAGGGAGGAACTAATGGCCGCCGGAGACAAGACCGGCGGCGACGAC GCTGCGGCGGCGGCGGCGGCGCCATTGCTGGTGTCGGCGGCGGGGAGGCGGCGGCGGTGC CCCGGGTGCCTGACGGAGGAGAGGTGCAAGGCCGACGCCGGCATCCCCTACCTCAACTTC TTCTACATCTGGGTCGTCTGCCTCTGCTCCTCGTTGCCAATTCAGTCGTTGTTTCCGTAT CTGTACTTCATGATCAGGGACTTGAAAGTCGCAAAGGAAGAGCAAGATATTGGGTTCTAT GCCGGTTTTGTCGGGGCTACTTATTTCCTTGGAAGAACTATCAGTGCAGTGCCATGGGGC ATTTTTGCTGACAAATATGGGAGGAAGCCCTGCATTGTGATCAGTATCCTCTCAGTGATT GTGTTTAACACACTCTTTGGCCTCAGCACGACTTACTGGATGGCAATTGTTACCAGGGGA TTACTTGGATTACTCTGTGGTATACTAGGACCAATCAAGGCCTATGCTTCAGAGGTCTGC AGGAAGGAGCACCAAGCTCTTGGAATTTCCCTTGTCACATCCTCGCGAGCAATAGCTCTG GTTGTTGGACCAGCTATTGGAGGATTTCTTTCGCAGCCTGCAAAGAAATACCCAAATCTT TTCTCTGAAGAATCGGTATTTGGGAGGTTTCCCTACTTTCTCCCTTGCTTCGTCATATCG GTACTAGCAGCAGGAGCATGTGTTGCGTGTATTTGGCTTCCGGAAACCCTGCACATGCAC CATGATGACAAAGAAGTCATTGATGCACTAGAGGCACAAGATGCGACTTCAGACTTAGGA GAAACAACTAAAGAATCAGGATCAGGGAGAATGGGCCATACAAAGAGTTTGCTGAAGAAC TGGCAGCTGATGTCAGCAATTACCCTCTACTGTGTCTTCTCTCTCCATGATACAGCTTAT CTTGAGATATTTTCACTCTGGGCTGTGAGCAGCAGAAAATACCGGGGCCTGAGTTTTACA TCCCAGGATGTTGGTATCGTGCTAGCTATTTCCGGTTTTGGTGTTTTGGTGTACCAACTT GCGATTTATCCGCTTCTTGCTAAATATGTTGGGCCAATCAAGCCATTCCGTTATGCAGCG GTCTTGTCTATACTTCTCCTTTCAACATATCCATTCATGGCTAACCTGTATGGTCTGGAG CTCAAAGTACTCATCAACATTGCTTCGCTTTTGAAAAATATGTTCGCTGCTACAATTACT ATTGCATGCAACATCCTGCAAAACACTGCAGTGACGCAAGAACAAAGAGGGGTTGCAAAT GGAATCTCTGTCACTCTGATGTCAATCTTCAAAGCCGTAGCTCCAGCAGCAGCTGGAATT TTGTTTTCATGGGCGCAAAAGCACATTACTGGGTTGTTCTTACCAGGTGAGCAGATCCTG TTCCTGATGCTGAACATGGTGTCAGTGATTGGGTTCATCCTGACATTCAAGCCATTTTTC GCCTTGCCGGATATGCGATGATGTGTAGTTAGGTAACAAAAAGGCCAGAATTTATCAGAC TTCAGCCTGGATTCTAACCTGCAAGAGGAATTCATGTACTGTACCGCGTGTAATGTTCAG TTGTGTAATCAGTTTGGTGGTATCTTTGATTTCTGTCTGAACTCCGAACCATTGGATGGT CGAGGCATATGATAAACAGCTAACGGGATCTTGTTTCATCTAAAAAAAAAAAAAAAAA



consensusID : consensus_6790#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 577
fasta sequence
                              [ACACCTCTCTCCCCTACGCCCTAATCCCCTTCCCTCTTGCACGCCGCGCCAATCTCCGCCGCCAGAGCGTCGTCGACCTGCGCAACAAACATCCACGGCGGCACCGGCAACCGCTCCCTGCGCCACCTCCTGATCGACGGGATCGCTCCCTGCGCTGCCGCCTCCGCCGATCACTTCCTGCGCCGCCGCACCTCACCCACAACTCTCTCCCCCACGCCCTAATCCCCTTTCCTCTCGCACACCGCGCCGATCTCCGCCGCCAGAGCATCGTCGACCCGCACAACCAACGTCCATGGTGGCAGTCCGCAATCGACCCCTGCCACCACGCAGTTTCTGCACACTGCTACAGTTATCAGCAACTTAATTGTGCTTGCAATGATTTTGCGTGGACAGACGCTGGTGTTGAGTCCAGCGCTTTCCATGATAGTGGACCAATTGAGGAAGCTCCATGCATTTCTTCCAGACGGCCTTCTTGCAAGCAGTCAGGGAAATAAAGGTACATTCTTCTTAAGCCCATCCCTATGCAATCAAGGCCTATGCTTTCAGAGTTCTGCAGGAAGGAGCACCAAGCTCTTGA]

[+] EMBL CF277218             [ACACCTCTCTCCCCTACGCCCTAATCCCCTTCCCTCTTGCACGCCGCGCCAATCTCCGCCGCCAGAGCGTCGTCGACCTGCGCAACAAACATCCACGGCGGCACCGGCAACCGCTCCCTGCGCCACCTCCTGATCGACGGGATCGCTCCCTGCGCTGCCGCCTCCGCCGATCACTTCCTGCGCCGCCGCACCTCACCCACAACTCTCTCCCCCACGCCCTAATCCCCTTTCCTCTCGCACACCGCGCCGATCTCCGCCGCCAGAGCATCGTCGACCCGCACAACCAACGTCCATGGTGGCAGTCCGCAATCGACCCCTGCCACCACGCAGTTTCTGCACACTGCTACAGTTATCAGCAACTTAATTGTGCTTGCAATGATTTTGCGTGGACAGACGCTGGTGTTGAGTCCAGCGCTTTCCATGATAGTGGACCAATTGAGGAAGCTCCATGCATTTCTTCCAGACGGCCTTCTTGCAAGCAGTCAGGGAAATAAAGGTACATTCTTCTTAAGCCCATCCCTATGCAATCAAGGCCTATGCTTTCAGAGTTCTGCAGGAAGGAGCACCAAGCTCTTGA]


>consensus_6790#1 ACACCTCTCTCCCCTACGCCCTAATCCCCTTCCCTCTTGCACGCCGCGCCAATCTCCGCC GCCAGAGCGTCGTCGACCTGCGCAACAAACATCCACGGCGGCACCGGCAACCGCTCCCTG CGCCACCTCCTGATCGACGGGATCGCTCCCTGCGCTGCCGCCTCCGCCGATCACTTCCTG CGCCGCCGCACCTCACCCACAACTCTCTCCCCCACGCCCTAATCCCCTTTCCTCTCGCAC ACCGCGCCGATCTCCGCCGCCAGAGCATCGTCGACCCGCACAACCAACGTCCATGGTGGC AGTCCGCAATCGACCCCTGCCACCACGCAGTTTCTGCACACTGCTACAGTTATCAGCAAC TTAATTGTGCTTGCAATGATTTTGCGTGGACAGACGCTGGTGTTGAGTCCAGCGCTTTCC ATGATAGTGGACCAATTGAGGAAGCTCCATGCATTTCTTCCAGACGGCCTTCTTGCAAGC AGTCAGGGAAATAAAGGTACATTCTTCTTAAGCCCATCCCTATGCAATCAAGGCCTATGC TTTCAGAGTTCTGCAGGAAGGAGCACCAAGCTCTTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6790#0      TCAGTCAGTTCCACACCTCTCCTTCCTTTAATTTCTCTCTGCTCGCCGGAGACAGACTAG 60
consensus_6790#1      ------------ACACCTCTCTCCCCTACGCCCTAATCCCCTTCCCTCTTGCACGCCGCG 48
                                  *********   ***      *    *   ** *    *   * *  *

consensus_6790#0      CTTAGCTAGTAGGAGAGGGAGGAACTAATGGCCGCCGGAGACAAGACCGGCGGCGACGAC 120
consensus_6790#1      CCAATCTCCGCCGCCAGAGCG---TCGTCGACCTGCGCAACAAACATCCACGGCGGCACC 105
                      *  * **     *  ** * *        * **  ** *   ** * *  ***** *  *

consensus_6790#0      GCTGCGGCGGCGGCGGCGGCGCCATTGCTGGTGTCGGCGGCGGGGAGGCGGCGGCGGTGC 180
consensus_6790#1      G--GCAACCGCTCC--CTGCGCCACCTCCTG-ATCGACG--GGATCGCTCCCTGCGCTGC 158
                      *  **  * **  *  * ******   *  *  *** **  **   *    * *** ***

consensus_6790#0      CCCGGGTGCCTGACGGAGGAGAGGTGCAAGGCCGACGCCGGCATCCCCTACCTCAACTTC 240
consensus_6790#1      CGCCTCCGCCGATC-------ACTTCCTGCGCCGCCGC--ACCTCACCCACAACTCTCTC 209
                      * *    ***   *       *  * *   **** ***   * ** ** **  *    **

consensus_6790#0      TTCTACATCTGGGTCGTCTG-CCTCTGCTCCTCGTTGCCAAT-TCAGTCGTTGTTTCCGT 298
consensus_6790#1      CCCCACGCCCTAATCCCCTTTCCTCTCGCACACCGCGCCGATCTCCGCCGCCAGAGCATC 269
                        * **  *    **  **  *****    * *   *** ** ** * **      *   

consensus_6790#0      ATCTGTACTTCATGATCAGGGACTTGAAAGTCGCAAAGGAAGAGCAAGATATTGGGTTCT 358
consensus_6790#1      GTCGAC-CCGCACAACCAACGTCC--ATGGTGGCAGTCCGCAATC--GACCCCTGCCACC 324
                       **    *  **  * **  * *   *  ** ***       * *  **     *   * 

consensus_6790#0      ATGCCGGTTTTGTCGGGGCTACTTATTTCCTTGGAAGAACTATCAGTGCAGTGCCATGGG 418
consensus_6790#1      ACGCAGTTTCTGC--ACACTGCTACAGTTATCAGCA-ACTTAATTGTGCT-TGCAATGA- 379
                      * ** * ** **      ** **    *  *  * * *  **   ****  *** ***  

consensus_6790#0      GCATTTTTGCTGACAAATATGGGAGG-AAGCCCTGCATTGTGATCAGTATCCTCTCAGT- 476
consensus_6790#1      --TTTTGCGTGGACAGACGCTGGTGTTGAGTCCAGCGCTTTCCATGATAGTGGACCAATT 437
                         ***  *  **** *    ** *   ** ** **  * *      **      ** * 

consensus_6790#0      GATTGTGTTTAACACACTCTTTGGCCTCAGCACGACTTACTGGATGGCAATTGTTACCAG 536
consensus_6790#1      GAGGAAGCTCCATGCATTTCTT----CCAG-ACGGCCTTCTTGCAAGCAGTCAGGGAAAT 492
                      **    * *  *  ** *  **     *** *** * * ** *   *** *       * 

consensus_6790#0      GGGATTACTTGGATTACTCTGTGGTATACTAGGAC-CAATCAAGGCCTATGCTT-CAGAG 594
consensus_6790#1      AAAGGTAC----ATTCTTCTTAAGCCCATCCCTATGCAATCAAGGCCTATGCTTTCAGAG 548
                           ***    ***  ***   *   *     *  ****************** *****

consensus_6790#0      GTCTGCAGGAAGGAGCACCAAGCTCTTGGAATTTCCCTTGTCACATCCTCGCGAGCAATA 654
consensus_6790#1      TTCTGCAGGAAGGAGCACCAAGCTCTTGA------------------------------- 577
                       ***************************                                

consensus_6790#0      GCTCTGGTTGTTGGACCAGCTATTGGAGGATTTCTTTCGCAGCCTGCAAAGAAATACCCA 714
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      AATCTTTTCTCTGAAGAATCGGTATTTGGGAGGTTTCCCTACTTTCTCCCTTGCTTCGTC 774
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      ATATCGGTACTAGCAGCAGGAGCATGTGTTGCGTGTATTTGGCTTCCGGAAACCCTGCAC 834
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      ATGCACCATGATGACAAAGAAGTCATTGATGCACTAGAGGCACAAGATGCGACTTCAGAC 894
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      TTAGGAGAAACAACTAAAGAATCAGGATCAGGGAGAATGGGCCATACAAAGAGTTTGCTG 954
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      AAGAACTGGCAGCTGATGTCAGCAATTACCCTCTACTGTGTCTTCTCTCTCCATGATACA 1014
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      GCTTATCTTGAGATATTTTCACTCTGGGCTGTGAGCAGCAGAAAATACCGGGGCCTGAGT 1074
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      TTTACATCCCAGGATGTTGGTATCGTGCTAGCTATTTCCGGTTTTGGTGTTTTGGTGTAC 1134
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      CAACTTGCGATTTATCCGCTTCTTGCTAAATATGTTGGGCCAATCAAGCCATTCCGTTAT 1194
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      GCAGCGGTCTTGTCTATACTTCTCCTTTCAACATATCCATTCATGGCTAACCTGTATGGT 1254
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      CTGGAGCTCAAAGTACTCATCAACATTGCTTCGCTTTTGAAAAATATGTTCGCTGCTACA 1314
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      ATTACTATTGCATGCAACATCCTGCAAAACACTGCAGTGACGCAAGAACAAAGAGGGGTT 1374
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      GCAAATGGAATCTCTGTCACTCTGATGTCAATCTTCAAAGCCGTAGCTCCAGCAGCAGCT 1434
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      GGAATTTTGTTTTCATGGGCGCAAAAGCACATTACTGGGTTGTTCTTACCAGGTGAGCAG 1494
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      ATCCTGTTCCTGATGCTGAACATGGTGTCAGTGATTGGGTTCATCCTGACATTCAAGCCA 1554
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      TTTTTCGCCTTGCCGGATATGCGATGATGTGTAGTTAGGTAACAAAAAGGCCAGAATTTA 1614
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      TCAGACTTCAGCCTGGATTCTAACCTGCAAGAGGAATTCATGTACTGTACCGCGTGTAAT 1674
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      GTTCAGTTGTGTAATCAGTTTGGTGGTATCTTTGATTTCTGTCTGAACTCCGAACCATTG 1734
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      GATGGTCGAGGCATATGATAAACAGCTAACGGGATCTTGTTTCATCTAAAAAAAAAAAAA 1794
consensus_6790#1      ------------------------------------------------------------
                                                                                  

consensus_6790#0      AAAA 1798
consensus_6790#1      ----
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)