cluster # 6799

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Oryza sativa
cluster # 6799 cluster # 6799 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6799#0 length = 728 sequences # 4

consensusID : consensus_6799#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 728
fasta sequence

                              [CCCTTTTTTTGTCAAAAGATTAGCTTTGATTTATTTATATCCCCTAGATCTGACACAGCAAAACTATCCTCCTTTGGAATTAGGCAATGCATTGTATGGTACAATTGAATGGCTAATGGCGTCTGAAACATTAAGAACAACTCACATCTCTACAAACACTCTGGATGAAGTAGTAATTTACAACTTACAAGCACCAAGAAACTGGCAA-TGGCAGCCA-AGAAGG-CGAGCGAGGC-CTAAAAGATGGTCTGCTCGCCGAGCTCCTGCCCTGCCATGCCTTCCCTGATCACCCTCTCGAAGAACT-GCTCGAGCG-TGT-CGCTGCCGTAGCTGGGCGTCAT-CTC-GTCGCTGTACTCGCCGGTGTCCGGGTCGAGCACCAGCATGCTCTCCGACGCGTAGTACCTCCCGATCTTGCC-GAACTCCGCCGC-GTCCTCCACCCCGGGGAACACCT-TGGCCAGCGCGTCGAGCACCCAGATGGCGGCGTCCATGACCTGGATCGGCACCTTGATGAACCTGGGCTCGCGCCCCAGCAGCCGGAACAGCATCTCCCCTTGCTCCAGCGGCGTCAGCGCCTTCCCCGGCCCGCCGATGGGGAGGATCTTGTTGGCCTTGCCCTCGTCGGAGATGCAGTCGGCGATGAACGCGGCGAGGTCCTCCTCGCTGATGGGCTTGCAGGCGCAGAGCTTCCCGTCGCCGAACATGACGTAGGGCTGGCCGTTCTTGACGGTCTCGAC]

[+] EMBL CB622774             [CCCTTTTTTTGTCAAAAGATTAGCTTTGATTTATTTATATCCCCCAGATCTGACACAGCAAAACTATCCTCCTTTGGAATTAGGCAATGCATTGTATGGTACAATTGAATGGCTCATGGCGTCTGAAACATTAAGAACAACTCACATCTCTACAAACACTCTGGATGAAGTAGTAATTTACAACTTACAAGCACCAAGAAACTGGCAA TGGCAGCCA AGAAGG CGAGCGAGGC CTAAAAGATGGTCTGCTCGCCGAGCTCCTGCCCTGCCATGCCTTCCCTGATCACCCTCTCGAAGAACT GCTCGAGCG TGT CGCTGCCGTAGCTGGGCGTCAT CTC GTCGCTGTACTCGCCGGTGTCCGGGTCGAGCACCAGCATGCTCTCCGACGCGTAGTACCTCCCGATCTTGCC GAACTCCGCCGC GTCCTCCACCCCGGGGAACACCT TGGCCAGCGCGTCGAGCACCCAGATGGCGGCGTCCATGACCTGGATCGGCACCTTGATGAACCTGGGCTCGCGCCCCAGCAGCCGGAACAGCATCTCCCCTTGCTCCAGCGGCGTCAGCGCCTTCCCCGGCCCGCCGATGGGGAGGATCTTGTTGGCCTTGCCCTCGTCGGAGATGCAGTCGGCGATGAACGCGGCGAGGTCCTCCTCGCTGA                                                                      ]
[+] EMBL CB625908             [                          TGATTTATTTATATCCCCTAAATCTGACACAGCAAAACTATCCTCCTTTGGAATTAGGCAATGCATTGTATGGTACAATTGAATGGCTAATGGCGTCTGAAACATTAAGAACAACTCACATCTCTACAAACACTCTGGATGAAGTAGTAATTTACAACTTACAAGCACCAAGAAACTGGCAA TGGCAGCCA AGAAGG CGAGCGAGGC CTAAAAGATGGTCTGCTCGCCGAGCTCCTGCCCTGCCATGCCTTCCCTGATCACCCTCTCGAAGAACT GCTCGAGCG TGT CGCTGCCGTAGCTGGGCGTCAT CTC GTCGCTGTACTCGCCGGTGTCCGGGTCGAGCACCAGCATGCTCTCCGACGCGTAGTACCTCCCGATCTTGCC GAACTCCGCCGC GTCCTCCACCCCGGGGAACACCT TGGCCAGCGCGTCGAGCACCCAGATGGCGGCGTCCATGACCTGGATCGGCACCTTGATGAACCTGGGCTCGCGCCCCAGCAGCCGGAACAGCATCTCCCCTTGCTCCAGCGGCGTCAGCGCCTTCCCCGGCCCGCCGATGGGGAGGATCTTGTTGGCCTTGCCCTCGTCGGAGATGCAGTCGGCGATGAACGCGGCGAGGTCCTCCTCGCTGATGGGCTTGCAGGCGCAGAGCTTCCCGTCGCCGAACATGACGTAGGGCTGGCCGTTCTTGA          ]
[-] EMBL BI812667             [                                          ttttttttTGACACAGCAAAACTATCCTCCTTGGGAATTAGGCAA GCA TGTATGGTACAATTGAATGGCTAATGGCGTCTGAAACATTAAGAACAACTCACATCTCTACAAACACTCTGGATGAAGTAGTAATTTACAACTTACAAGCACCAAGAAACTGGCAAGTGGCAGCCA AGAAGG CGAGCGAGGC CTAGAAGATGGTCTGCTCGCCGAGCTCCTGGCCTGCCATGCCTTCCCTGATCACCCTCTCGAAGAACTGGCTCGAGCGTTGTCCGCTGCCGTAGTGGGGCGTCATCCTCGGTCGCTGTACTCGCCGGTGTCCGGGTCGAGCACCAGCATGCTCTCCGA GCGTAGTAACTCCCGATCTTGCCAGAACTCCGCCGCAGTCCTCCAACCCGGGGAACAACTATGGCCAGAGCGTC                                                                                                                                                                                                                                                                              ]
[+] EMBL CB679855             [                                                                                                                                                                           atTAGTTTACAACTTACCAACACCAAGAAACTGGCAA TGGCACCCACAGAAGGCCCATCGAGGCGCTACAAGATGGTCTGCTCTCCCATCTCCTGCCCTGACATGCCTTCCCTGATCACCCTCTCGAACAACT GCTCCAGCG TGT CGCTGCCGTAGATAGGCCTCAT CTC GTCACTGGACTCACCGGTGTCCTGGTCGAGCACCACCATGCTCTCCTACTCCTACTACCTCCCGATCTTGCC GAACTCCGCCGC GTCCTCCACCCCGGGGAACACCT TGGCCAGCGCGTCGAGCACCCAGATGGCGGCGTCCATGACCTGGATCGGCACCTTGATGAACCTGGGCTCGCGCCCCAGCAGCCGGAACAGCATCTCCCCTTGCTCCAGCGGCGTCAGCGCCTTCCCCGGCCCGCCGATGGGGAGGATCTTGTTGGCCTTGCCCTCGTCGGAGATGCAGTCGGCGATGAACGCGGCGAGGTCCTCCTCGCTGATGGGCTTGCAGGCGCAGAGCTTCCCGTCGCCGAACATGACGTAGGGCTGGCCGTTCTTGACGGTCTCGAC]




>consensus_6799#0
CCCTTTTTTTGTCAAAAGATTAGCTTTGATTTATTTATATCCCCTAGATCTGACACAGCA
AAACTATCCTCCTTTGGAATTAGGCAATGCATTGTATGGTACAATTGAATGGCTAATGGC
GTCTGAAACATTAAGAACAACTCACATCTCTACAAACACTCTGGATGAAGTAGTAATTTA
CAACTTACAAGCACCAAGAAACTGGCAATGGCAGCCAAGAAGGCGAGCGAGGCCTAAAAG
ATGGTCTGCTCGCCGAGCTCCTGCCCTGCCATGCCTTCCCTGATCACCCTCTCGAAGAAC
TGCTCGAGCGTGTCGCTGCCGTAGCTGGGCGTCATCTCGTCGCTGTACTCGCCGGTGTCC
GGGTCGAGCACCAGCATGCTCTCCGACGCGTAGTACCTCCCGATCTTGCCGAACTCCGCC
GCGTCCTCCACCCCGGGGAACACCTTGGCCAGCGCGTCGAGCACCCAGATGGCGGCGTCC
ATGACCTGGATCGGCACCTTGATGAACCTGGGCTCGCGCCCCAGCAGCCGGAACAGCATC
TCCCCTTGCTCCAGCGGCGTCAGCGCCTTCCCCGGCCCGCCGATGGGGAGGATCTTGTTG
GCCTTGCCCTCGTCGGAGATGCAGTCGGCGATGAACGCGGCGAGGTCCTCCTCGCTGATG
GGCTTGCAGGCGCAGAGCTTCCCGTCGCCGAACATGACGTAGGGCTGGCCGTTCTTGACG
GTCTCGAC

clustalw multiple alignements is not computed in this case