cluster # 6804

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Oryza sativa
cluster # 6804 cluster # 6804 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6804#0 length = 1524 sequences # 4
consensusID : consensus_6804#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1524
fasta sequence
                              [TGGCTCCAAGAAACCGCCCTTGAGCAACTCTCAAGAATATCTAAATACCTTTATGTCCTTGTTGAAGATATGAAATTGTTGAAAGGAAATGTTCCATTGCTAACTTCAGTGCTAAATGTGATTGCATCAACGATGAGGTTGTCTATGAAAAGGAAGATTTACCAACCACATTTCTCTTTATCCCTCCATGGCATACATAAATTGTGCCGAACTATTGGTGGCATCTCAAGAAGCATAGAAGTTAAGCTTGCAATGCAACTTGGCATTGATGTCATTCTTATGAATGGTCCTCTGCCAGTTTTGTCTGAAATGGATAAGTCGATGACAGCAACTGTTGTTTCATGGGCAACTTCTAACATCTTCTGGTTGTGTGATGAACAAAGATCTGTACTGAAAATGCCACATGAAGAGCCACTAAAAAACGAGTGCCTACTTTCTAAGATGCTGCGCTGGTTAGTGGCTTCCATAATTCTTGGGAAAATCTCCTGCATCTCTCATGAAAAGTGTGGAGACCTTACAAGGGATGCCAACAATTTTGGATCTCTTGAATCTTTCTTGAACTATACATATGATGAAAAGGTTGAAACTGTTGGCAGTCACAGTGCAGATGAGGCACTAGCTATAATTATACTGTACCTGCAAAAACATCTGAAAATGAACCGAGATTTTTTGCCATCTGTGGTGGCTGCTCTTTGCTTGTTGCTTCTTGACAGATCCAATAAACAAGTTATCAGAAACTTCATTGGCGATTATGGACAAATCGAAATGCTGTGCTCACAGATACAATGTCCGGCTGAAGCTAATCCTGCATGGAGATGGCATTATTATCAACCTTGGAAGGATCCTGCTATGCATCGCAATGAGGCAGAGCACCTAGAAGAAGAGCAGGCCTGCCAAAGCCTCCTGGTTATGTTTTCTAACAGCTTCAGTGCTGGGCTTTCAGGTTTTCCTGTGTTGTCACTTGGTGATGTTGAGAAGTCTGGCCTATTTCAGTGGGAAAGACATTCCATACTTAAATAGACGTAAACTTCAGTTTGCTGAAGTTGAAACGGTTCTTTAATTTCCCAGAGCCCA-ATGGCAATCAAC-TGACCAACTGACTGAACGGTTACGCTAGGAGGACTTGGTGTGTTTGCGTAACT-CAAAACAGAAATTGGGATAATGATTTATTTCATCAGTCATCACTACAGGACTCTATATGATGATGTGGTTCA-GGGAATCCAGGTCGATAAATGCCTGGAAAGATTTCCAACTCTCAGTTTTGAAGCAAGCATCTGCCAATACGAACCTAACATTGGTATTTGCTGCATAACTGACCTGTGTATACATATATAATCA-AAAGAACGCCTGGTCCTCAATTGGATCGTAAAGGTTGATTGTG-CCT-TTTTTTTTCTTCCTTCTATAAACGGCTGAGTATACCTGTACCGAGCTCATCAATGCAATCGATCTCTTAATTTGGAACAAGGACATCCATTATTATTGCTCACTATCTCTTGCATTAGTCATTTTCACTGGGTAAAAAAAAAA]

[+] EMBL AK064498             [TGGCTCCAAGAAACCGCCCTTGAGCAACTCTCAAGAATATCTAAATACCTTTATGTCCTTGTTGAAGATATGAAATTGTTGAAAGGAAATGTTCCATTGCTAACTTCAGTGCTAAATGTGATTGCATCAACGATGAGGTTGTCTATGAAAAGGAAGATTTACCAACCACATTTCTCTTTATCCCTCCATGGCATACATAAATTGTGCCGAACTATTGGTGGCATCTCAAGAAGCATAGAAGTTAAGCTTGCAATGCAACTTGGCATTGATGTCATTCTTATGAATGGTCCTCTGCCAGTTTTGTCTGAAATGGATAAGTCGATGACAGCAACTGTTGTTTCATGGGCAACTTCTAACATCTTCTGGTTGTGTGATGAACAAAGATCTGTACTGAAAATGCCACATGAAGAGCCACTAAAAAACGAGTGCCTACTTTCTAAGATGCTGCGCTGGTTAGTGGCTTCCATAATTCTTGGGAAAATCTCCTGCATCTCTCATGAAAAGTGTGGAGACCTTACAAGGGATGCCAACAATTTTGGATCTCTTGAATCTTTCTTGAACTATACATATGATGAAAAGGTTGAAACTGTTGGCAGTCACAGTGCAGATGAGGCACTAGCTATAATTATACTGTACCTGCAAAAACATCTGAAAATGAACCGAGATTTTTTGCCATCTGTGGTGGCTGCTCTTTGCTTGTTGCTTCTTGACAGATCCAATAAACAAGTTATCAGAAACTTCATTGGCGATTATGGACAAATCGAAATGCTGTGCTCACAGATACAATGTCCGGCTGAAGCTAATCCTGCATGGAGATGGCATTATTATCAACCTTGGAAGGATCCTGCTATGCATCGCAATGAGGCAGAGCACCTAGAAGAAGAGCAGGCCTGCCAAAGCCTCCTGGTTATGTTTTCTAACAGCTTCAGTGCTGGGCTTTCAGGTTTTCCTGTGTTGTCACTTGGTGATGTTGAGAAGTCTGGCCTATTTCAGTGGGAAAGACATTCCATACTTAAATAGACGTAAACTTCAGTTTGCTGAAGTTGAAACGGTTCTTTAATTTCCCAGAGCCCA ATGGCAATCAAC TGACCAACTGACTGAACGGTTACGCTAGGAGGACTTGGTGTGTTTGCGTAACT CAAAACAGAAATTGGGATAATGATTTATTTCATCAGTCATCACTACAGGACTCTATATGATGATGTGGTTCA GGGAATCCAGGTCGATAAATGCCTGGAAAGATTTCCAACTCTCAGTTTTGAAGCAAGCATCTGCCAATACGAACCTAACATTGGTATTTGCTGCATAACTGACCTGTGTATACATATATAATCA AAAGAACGCCTGGTCCTCAATTGGATCGTAAAGGTTGATTGTG CCT TTTTTTTTCTTCCTTCTATAAACGGCTGAGTATACCTGTACCGAGCTCATCAATGCAATCGATCTCTT                                                                           ]
[+] EMBL CB680852             [                                                                                                                                 ACGATGCCGTTGTCTATGAAAAGGAAGATTTACCAACCACATTTCTCTTTATCCCTCCATGGCATACATAAATTGTGCCGAACTATTGGTGGCATCTCAAGAAGCATAGAAGTTAAGCTTGCAATGCAACTTGGCATTGATGTCATTCTTATGAATGGTCCTCTGCCAGTTTTGTCTGAAATGGATAAGTCGATGACAGCAACTGTTGTTTCATGGGCAACTTCTAACATCTTCTGGTTGTGTGATGAACAAAGATCTGTACTGAAAATGCCACATGAAGAGCCACTAAAAAACGAGTGCCTACTTTCTAAGATGCTGCGCTGGTTAGTGGCTTCCATAATTCTTGGGAAAATCTCCTGCATCTCTCATGAAAAGTGTGGAGACCTTACAAGGGATGCCAACAATTTTGGATCTCTTGAATCTTTCTTGAACTATACATATGATGAAAAGGTTGAAACTGTTGGCAGTCACAGTGCAGATGAGGCACTAGCTATAATTATACTGTACCTGCAAAAACATCTGAAAATGAACCGAGATTTTTTGCCATCTGTGGTGGCTGCTCTTTGCTTGTTGCTTCTTGACAGATCCAATAAACAAGTTATCAGAAACTTCATTGGCGATTATGGACAAATCGAAATGCTGTGCTCACAGATACAATGTCCGGCTGAAGCTAATCCTGCATGGAGATGGCATTATTATCAACCTTGGAAGGATCCTGCTATGCATCGCAATGAGGCAGAGCACCTAGAAGAAGAGCAGGCCTGCCAAAGCCTCCTGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB680853             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGGTTGAAACTGTTGGCAGTCACAGTGCAGATGAGGCACTAGCTATAATTATACTGTACCTGCAAAAACATCTGAAAATGAACCGAGATTTTTTGCCATCTGTGGTGGCTGCTCTTTGCTTGTTGCTTCTTGACAGATCCAATAAACAAGTTATCAGAAACTTCATTGGCGATTATGGACAAATCGAAATGCTGTGCTCACAGATACAATGTCCGGCTGAAGCTAATCCTGCATGGAGATGGCATTATTATCAACCTTGGAAGGATCCTGCTATGCATCGCAATGAGGCAGAGCACCTAGAAGAAGAGCAGGCCTGCCAAAGCCTCCTGGTTATGTTTTCTAACAGCTTCAGTGCTGGGCTTTCAGGTTTTCCTGTGTTGTCACTTGGTGATGTTGAGAAGTCTGGCCTATTTCAGTGGGAAAGACATTCCATACTTAAATAGACGTAAACTTCAGTTTGCTGAAGTTGAAACGGTTCTTTAATTTCCCAGAGCCCA ATGGCAATCAAC TGACCAACTGACTGAACGGTTACGCTAGGAGGACTTGGTGTGTTTGCGTAACT CAAAACAGAAATTGGGATAATGATTTATTTCATCAGTCATCACTACAGGACTCTATATGATGATGTGGTTCA GGGAATCCAGGTCGATAAATGCCTGGAAAGATTTCCAACTCTCAGTTTTGAAGCAAGCATCTGCCAATACGAACCTAACATTGGTATTTGCTGCATAACTGACCTGTGTATACATATATAATCA AAAGAACGCCTGGTCCTCAATTGGATCGTAAAGGTTGATTGTG CCT TTTTTTTTCTTCCTTCTATAAACGGCTGAGTATACCTGTACCGAGGTCATCAATGCAATCGATCTCTTAATTTGGA                                                                   ]
[+] EMBL BI812434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          cGTTCTTTTA TTCCC GAGCCCACATGGCAATCAACGTGACCAACTGACTGTACGGTTAC CTAGGA GACTT GT TGTTTGCGTTACTCCAACACAGAAATTGGGATAATGATTTATTTCATCAGTCATCACTACAGGACTCTATATGATGATGTGGTTCACGGGAATCCAGGTCGATAAATGCCTGGAAAGATTTCCCACTCTCA TTTTGAAGCAAGCATCTGCCCATACGAACCT ACATTGGTATTTGCTGCATAACTGACCTGTGTATACATATATAATCACAAAG ACGCCTGGTCCTCAATTGGATCGTAAAGGTTGATTGTGCCCTGTTTTTTTTCTTCCTTCTATAAACGGCTGAGTATACCTGTACCGAGCTCATCAATGCAATCGATCTCTTAATTTGTGACAAGGACATCCATTATTATTGCTCACTATCTCTTGCATTAGTCATTTTCACTGGGTAAAAAAAAAA]




>consensus_6804#0
TGGCTCCAAGAAACCGCCCTTGAGCAACTCTCAAGAATATCTAAATACCTTTATGTCCTT
GTTGAAGATATGAAATTGTTGAAAGGAAATGTTCCATTGCTAACTTCAGTGCTAAATGTG
ATTGCATCAACGATGAGGTTGTCTATGAAAAGGAAGATTTACCAACCACATTTCTCTTTA
TCCCTCCATGGCATACATAAATTGTGCCGAACTATTGGTGGCATCTCAAGAAGCATAGAA
GTTAAGCTTGCAATGCAACTTGGCATTGATGTCATTCTTATGAATGGTCCTCTGCCAGTT
TTGTCTGAAATGGATAAGTCGATGACAGCAACTGTTGTTTCATGGGCAACTTCTAACATC
TTCTGGTTGTGTGATGAACAAAGATCTGTACTGAAAATGCCACATGAAGAGCCACTAAAA
AACGAGTGCCTACTTTCTAAGATGCTGCGCTGGTTAGTGGCTTCCATAATTCTTGGGAAA
ATCTCCTGCATCTCTCATGAAAAGTGTGGAGACCTTACAAGGGATGCCAACAATTTTGGA
TCTCTTGAATCTTTCTTGAACTATACATATGATGAAAAGGTTGAAACTGTTGGCAGTCAC
AGTGCAGATGAGGCACTAGCTATAATTATACTGTACCTGCAAAAACATCTGAAAATGAAC
CGAGATTTTTTGCCATCTGTGGTGGCTGCTCTTTGCTTGTTGCTTCTTGACAGATCCAAT
AAACAAGTTATCAGAAACTTCATTGGCGATTATGGACAAATCGAAATGCTGTGCTCACAG
ATACAATGTCCGGCTGAAGCTAATCCTGCATGGAGATGGCATTATTATCAACCTTGGAAG
GATCCTGCTATGCATCGCAATGAGGCAGAGCACCTAGAAGAAGAGCAGGCCTGCCAAAGC
CTCCTGGTTATGTTTTCTAACAGCTTCAGTGCTGGGCTTTCAGGTTTTCCTGTGTTGTCA
CTTGGTGATGTTGAGAAGTCTGGCCTATTTCAGTGGGAAAGACATTCCATACTTAAATAG
ACGTAAACTTCAGTTTGCTGAAGTTGAAACGGTTCTTTAATTTCCCAGAGCCCAATGGCA
ATCAACTGACCAACTGACTGAACGGTTACGCTAGGAGGACTTGGTGTGTTTGCGTAACTC
AAAACAGAAATTGGGATAATGATTTATTTCATCAGTCATCACTACAGGACTCTATATGAT
GATGTGGTTCAGGGAATCCAGGTCGATAAATGCCTGGAAAGATTTCCAACTCTCAGTTTT
GAAGCAAGCATCTGCCAATACGAACCTAACATTGGTATTTGCTGCATAACTGACCTGTGT
ATACATATATAATCAAAAGAACGCCTGGTCCTCAATTGGATCGTAAAGGTTGATTGTGCC
TTTTTTTTTCTTCCTTCTATAAACGGCTGAGTATACCTGTACCGAGCTCATCAATGCAAT
CGATCTCTTAATTTGGAACAAGGACATCCATTATTATTGCTCACTATCTCTTGCATTAGT
CATTTTCACTGGGTAAAAAAAAAA
clustalw multiple alignements is not computed in this case