cluster # 6820

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Oryza sativa
cluster # 6820 cluster # 6820 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6820#0 length = 929 sequences # 4
consensusID : consensus_6820#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 929
fasta sequence
                              [GCGGCGGCCGGGGTTGTGGCGTTGCTCGCCGTGGGGGTGCTGGTCGGGGCCATCGTGGTGGTGCTCCGGCCGGACGCGCTGGTCATGAAGGTCATCCACGGCTCCATGTTGGTAAACCTGCCGCCGCCGAGCTTGACGTTCACGTTCCAGCTGGAGGTCGACAACCCAAGCGGGCGCGACACCATGAGCTTCACCGACATGTCCGTCGCCGTCTTGGCCGTCTCCGTCTCCGGCGGCGGCGTGATCAGCATGGCTAACCTCTTCTACTTGCCCAACATCACGGACTTGCAGCCGGGGAAGATGATGCANGTGGTGACGACGCA-TGGACGACCAANCCGGAAGCGGAAGTCGGCGACTANTTCGTGAAGAAGCTATNCCG-TGGGGAAACCATGGCCGTCACCCTGCGAGTCCA-GGGCATCC-TCATCA-CCAGGTTGGA-CACCC-TC-AACGG-CGACGGGCCGGT-CCACACCAGCAAGG-CCAACGTCACCTACACTT-GCTTCAACGTTAAACTCGGCGTCGACAAGT-CCTTGAACT-CCACCGACGACGTTTCTTGCAA-TAGCAAGCAGTGGCGGATCTAGAAAAAAATAGTAGTGGGGGCTGAATAAACTACATCAGCATAAATCGAACCTTCAGTCCCCACATCCTATAGATCTATGGAAAAAAAATTTAGTGGGGGCTTAGGGGGGTCTCCACTATCCCGGGGGCGGTAGTGGGGTCTCGAGACCCCTCCGCCCCCATTGTGAATCCGCCCCTGCCAGCAAGTAGCTACGTACCTATCACTTACTGTACTTACCTACGTACGCTATATACATATACTTATATAAAAAAATATAGNTACATACATATGTATGTATGTATGTATGCGTGCCGCGCGTGTGTAGATATATATATACATACACACGTAAAATAAACAAAAAATAATTAATGAAAAA]

[+] EMBL AU030207             [GCGGCGGCCGGGGTTGTGGCGTTGCTCGCCGTGGGGGTGCTGGTCGGGGCCATCGTGGTGGTGCTCCGGCCGGACGCGCTGGTCATGAAGGTCATCCACGGCTCCATGTTGGTAAACCTGCCGCCGCCGAGCTTGACGTTCACGTTCCAGCTGGAGGTCGACAACCCAAGCGGGCGCGACACCATGAGCTTCACCGACATGTCCGTCGCCGTCTTGGCCGTCTCCGTCTCCGGCGGCGGCGTGATCAGCATGGCTAACCTCTTCTACTTGCCCAACATCACGGACTTGCAGCCGGGGAAGATGATGCANGTGGTGACGACGCA TGGACGACCAANCCGGAAGCGGAAGTCGGCGACTANTTCGTGAAGAAGCTATNCCGTTGGGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB646791             [          GGGTTGTGGCGTTGCTCGCCGTGGGGGTGCTGGTCGGGGCCATCGTGGTGGTGCTCCGGCCGGACGCGCTGGTCATGAAGGTCATCCACGGCTCCATGTTGGTAAACCTGCCGCCGCCGAGCTTGACGTTCACGTTCCAGCTGGAGGTCGACAACCCAAGCGGGCGCGACACCATGAGCTTCACCGACATGTCCGTCGCCGTCTTGGCCGTCTCCGTCTCCGGCGGCGGCGTGATCAGCATGGCTAACCTCTTCTACTTGCCCAACATCACGGACTTGCAGCCGGGGAAGATGATGCAGGTGGTGACGACGCAGTGGACGACCAACCCGGAGGCGGAGGTCGGCGACTACTTCGTGAGGAGGCTATCCCG TGGGGAAACCATGGCCGTCACCCTGCGAGTCCA GGGCATCC TCATCA CCAGGTTGGA CACCC TC AACGG CGACGGGCCGGT CCACACCAGCAAGG CCAACGTCACCTACACTT GCTTCAACGTTAAACTCGGCGTCGACAAGT CCTTGAACT CCACCGACGACGTTTCTTGCAA TAGCAAGCAGTGGCGGATCTAGAAAAAAATAGTAGTGGGGGCTGAATAAACTACATCAGCATAAATCGAACCTTCAGTCCCCACATCCTATAGATCTATGGAAAAAAAATTTAGTGGGGGCTTAGGGGGGTC                                                                                                                                                                                                                                                    ]
[+] EMBL AU030208             [                                                                                                                                                                                                                                                                                                                                                                                                                          cCCAGGGGCATCCTTCATCACCCAGTTTGGACCACCCTTCAAACGGNCGACGGGCCGGTCCCACNCCAGCAAGGCCCAACGTCACCTACACTTGGCTTCAACGTTAAACTCGGCGTCGACAAGTCCCTTGAACTCCCACCGACGACGTTTCTTGCAATTAGCAAGCAGTGGCGGATCTAGAAAAAAATAGTAGTGGGGGCTGAATAAACTACATCAGCATAAATCGAACCTTCAGTCCCCACATCCTATAGATCTATGGAAAAAAAATTTAGTGGGGGCTTAGGGGGGTCTCCACTATCCCGGGGGCGGTAGTGGGGTCTCGAGACCCCTCCGCCCCCATTGTGAATCCGCCCCTGCCAGCAAGTAGCTACGTACCTATCACTTACTGTACTTACCTACGTACGCTATATACATATACTTATATAAAAAA                                                                                                        ]
[+] EMBL AU108172             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACATCCTATAGATCTATGGAAAAAAAATTTAGTGGGGGCTTAGGGGGGTCTCCACTATCCCGGGGGCGGTAGTGGGGTCTCGAGACCCCTCCGCCCCCATTGTNAATCCGCCCCTGCCAGCAAGTAGCTACGTACCTATCACTTACTGTACTTACCTACGTACGCTATATACATATACTTATATATCTGCATATAGNTACATACATATGTATGTATGTATGTATGCGTGCCGCGCGTGTGTAGATATATATATACATACACACGTAAAATAAACAAAAAATAATTAATGAAAAA]




>consensus_6820#0
GCGGCGGCCGGGGTTGTGGCGTTGCTCGCCGTGGGGGTGCTGGTCGGGGCCATCGTGGTG
GTGCTCCGGCCGGACGCGCTGGTCATGAAGGTCATCCACGGCTCCATGTTGGTAAACCTG
CCGCCGCCGAGCTTGACGTTCACGTTCCAGCTGGAGGTCGACAACCCAAGCGGGCGCGAC
ACCATGAGCTTCACCGACATGTCCGTCGCCGTCTTGGCCGTCTCCGTCTCCGGCGGCGGC
GTGATCAGCATGGCTAACCTCTTCTACTTGCCCAACATCACGGACTTGCAGCCGGGGAAG
ATGATGCANGTGGTGACGACGCATGGACGACCAANCCGGAAGCGGAAGTCGGCGACTANT
TCGTGAAGAAGCTATNCCGTGGGGAAACCATGGCCGTCACCCTGCGAGTCCAGGGCATCC
TCATCACCAGGTTGGACACCCTCAACGGCGACGGGCCGGTCCACACCAGCAAGGCCAACG
TCACCTACACTTGCTTCAACGTTAAACTCGGCGTCGACAAGTCCTTGAACTCCACCGACG
ACGTTTCTTGCAATAGCAAGCAGTGGCGGATCTAGAAAAAAATAGTAGTGGGGGCTGAAT
AAACTACATCAGCATAAATCGAACCTTCAGTCCCCACATCCTATAGATCTATGGAAAAAA
AATTTAGTGGGGGCTTAGGGGGGTCTCCACTATCCCGGGGGCGGTAGTGGGGTCTCGAGA
CCCCTCCGCCCCCATTGTGAATCCGCCCCTGCCAGCAAGTAGCTACGTACCTATCACTTA
CTGTACTTACCTACGTACGCTATATACATATACTTATATAAAAAAATATAGNTACATACA
TATGTATGTATGTATGTATGCGTGCCGCGCGTGTGTAGATATATATATACATACACACGT
AAAATAAACAAAAAATAATTAATGAAAAA
clustalw multiple alignements is not computed in this case