cluster # 6836

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Oryza sativa
cluster # 6836 cluster # 6836 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6836#0 length = 432 sequences # 4

consensusID : consensus_6836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 432
fasta sequence

                              [ATCAGTAGAAGAGATTGCTCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGCTGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGGTGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCCTGTAAGTTGGTAATAGGTCAGACACACGACATGCTTTGTAGTGCCATGGAGTAGCTGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATACTTTTTTTTTTTTTTGATATGGGCTTTTTCCAATNTGGTGCCTGATAACTTGTACGGTGGCTTGGTGCAGAAACTTCTATTTTTTGTTTAGTTTTCTGAATGGCGATTCAAATGGTTAAAAAA]

[+] EMBL AU174399             [ATCAGTAGAAGAGATTGCTCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGCTGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGGTGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCCTGTAAGTTGGTAATAGGTCAGACACNCGACATGCTTTGTAGTGCCATGGAGTAGCTGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATACTTTTTTTTTTTTTTGATATGGGCTTTTTCCAATNTGGTGCCTGATAACTTGTACGGTGGCTTGGTGCAGAAACTTCTATTTTTTGTTTAGTTTTCTGAATGGCGATTCAAATGGTTAAAAA ]
[+] EMBL CF307703             [                 CTCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGCTGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGGTGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCCTGTAAGTTGGTAATAGGTCAGACACACGACATGCTTTGTAGTGCCATGGAGTAGCTGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATACTTTTTTTTTTTTTgaaaaa                                                                                                       ]
[-] EMBL CF307704             [                  TCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGCTGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGGTGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCCTGTAAGTTGGTAATAGGTCAGACACACGACATGCTTTGTAGTGCCATGGAGTAGCTGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATACTTTTTTTTTTTTTgaaaaaa                                                                                                      ]
[+] EMBL CA764233             [                                                                                                                                                                                                                                           TGCCATTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTACACGCTGATAC  TTTTTTTTTTTTGATATGGGCTTTTTCCAATCTGGTGCCTGATAACTTGTACGGTGGCTTGGTGC GAAACTTCTATTTTTTGTTTAGTTTTCTGAATGGCGATTCAAATG   AAAAAA]




>consensus_6836#0
ATCAGTAGAAGAGATTGCTCAGGACATCAAACGGCCCAAATATTTCAGTCCAAGTGAAGC
TGTGGATTATGGGATCATTGACAAGGTGCTGTACAATGAGAAAAGCCAAGAAGACGGTGG
TGTCGTATCGGAGCTCAAAAGATCAAATTTGATATAGTATTACGCTAGATACAATCTCCC
TGTAAGTTGGTAATAGGTCAGACACACGACATGCTTTGTAGTGCCATGGAGTAGCTGCCA
TTCATTAGCTGGCCTGGTTGTAGAACATCGAGCTGGATTGGCAATGCAAATATGCAGTAC
ACGCTGATACTTTTTTTTTTTTTTGATATGGGCTTTTTCCAATNTGGTGCCTGATAACTT
GTACGGTGGCTTGGTGCAGAAACTTCTATTTTTTGTTTAGTTTTCTGAATGGCGATTCAA
ATGGTTAAAAAA

clustalw multiple alignements is not computed in this case