These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6842#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 575 fasta sequence [GCGCTTGTCTGACCGGGGATCTTCGAGCGCATCCCACATCNCGGGATCTTANCGACGTCNGACAACTGCGAGGCCTACTGCACCTGGCGTGGGACAAGTGGACGCGGCGTACCC-GCGACACGGTTCTACGTGGGGATGACGGCATCGGAGATGACG-CA-CGGGTGGGTGCACCCCAAGAACGTCTACTACGAC-GTCGCCCCGTCCACGCAGAAGGCGGAC-AACTACGGCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCACA-CAGCATCACTGGCTACTACAAACTCTGTCTGTCGAATACTCTGTCTGT-C-ATCGCCTATCCTCCACCTCGTCTATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAAC-GTTATTAGGGCTACATAATAAAAGTGGAGAATAAACNTTATATGTAT-AACCC-GTTGA-C-ATAAAGTACTCAATCTCGAGCATTTTCCTGGCTAAAAAAAAAAA] [+] EMBL BM038825 [GCGCTTGTCTGACCGGGGATCTTCGAGCGCATCCCACATCNCGGGATCTTANCGACGTCNGACAACTGCGAGGCCTACTGCACCTGGCGTGGGACAAGTGGACGCGGCGTACCC GCGACACGGTTCTACGTGGGGATGACGGCATCGGAGATGACG CA CGGGTGGGTGCACCCCAAGAACGTCTACTACGACAGTCGCCCCGTCCACGCAGAAGGCGGAC AACTACGGCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCACA CAGCCTCACTGGCTACTAC AACTCTGTCTGTCGAATACTCTGTCTGT C ATCGCCTATCCTCCACCTCGTCTATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAAC GTTATTAGGGCTACATAATAACNCTGGAGAATAAACTTTATATGTAA AAaa ] [+] EMBL BM419409 [ CGTACCCGGCGACACGGTTTTACGTGGGGATGACGGCATCGGAGATGACGCCACCGGGTGGGTGCACCCCCAGAACGTCTACTACGAC GTCGCCCCGTCCACGCAGAAGGCGGAC AACTACGGCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACNCCNGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCCGTAGGCCACAGCAGCATCACTGGCTACTACNAACTCTGTCTGTCGAATACTCTGTCTGTCC ATCGCCTATCCTCCCCCTCGTCTATGTCCGTGTANGCATTTGTGCTTGCCAGAAAGAATAAAGTGAAGAATAACN GTTATTAGGGCTACATAATAAAAGTGGAGAATAAACNTTATATGTATGACCCC GTTGACC ATAAAGTACTCCATCTCGAGCNTTTTCCTGGCTTAAAAAAAAAA] [+] EMBL BQ907374 [ A CGGGTGGGTGCACCCCAAGAACGTCTACTACGAC GTCGCCCCGTCCACGCAGAA GCGGAC AACTACGGCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCAAG CAGCATCACTGGCTACTACAAACTCTGTCTGTCGAATACTCTGTCTGT C ATCGCCTATCCTCCACCTCGTCTATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAAC GTTATTAGGGCTACATAATAAAAGTGGAGAATAAAC TTATATGTAT GACCC GTTGA C ATAAAGTACTCAATCTCGAGCATTTTCCTGGCTAAAAAA ] [+] EMBL BI811769 [ CCCAAGAACGTCTACTACGAC GTCGCCCCGTCCACGCAGAA GCGGACAAACTAC GCGGCTTCATGATCTGGGACCGATACTACGACAAGCTGAGCAACTACACCAGCATGGTCAAGGCCTATGCTTGAGCCTCATCTGATCGTGATCGACTTCTCCCATCCGTGCCAGTAGGCCAAG CAGCATCACTGGCTACTACAAACTCTGTCTGTCGAATACTCTGTCTGT CAATCGCCTATCCTCCACCTCGTCTATGTCCGTGTATGCATTTGTGCTTGCAAGAAAGAATAAAGTGAAGAATAAACAGTTATTAGGGCTACATAATAAAAGTGGAGAATAAACATTATATGTAT GACCCAGTTGA CAATAAAGTACTCAATCTCGAGCATTTTCCTGGCTAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||