cluster # 6846

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Oryza sativa
cluster # 6846 cluster # 6846 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6846#0 length = 624 sequences # 4

consensusID : consensus_6846#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 624
fasta sequence

                              [GCGTCCGCAAAATTCCAAAT-CTCCGGTCCAGATCGAGCACAGCTGTACGGAGCGCCTCTTCTCCGGGCCGCCGGCGCCAACTCCTCCGGCAGTCCGGCACTCCGGCTCTACGCTGCAGCCACACCGCCACCGCCAGCCGTTCCAGACGCGCGCGCCGCCGCT-GTCCCGTCCCCTCCATCGGGCGTCGACGCGCCGCCGGAAGCCGCCGGTGTCGCGTTGCCCGGCGCCTGCAGCCGTCAACGCGGGCGTGGCGCCAGCAGCCGTCGTCTCGCGGCCGGGAGAAGCCGTCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCATCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCGTCGCCTGGTTTGATATCTAGTGTGCTGATTTGTTGATCCATGACTAATAGTTGTT-AAGTGGATTA-TTTTCGAAAAATACTGATGTGCTGTATTGCTCAAGTGTTGATTTGTGTTTCTTTGCATTTATATATGTATGGTATGGAGTTTGGACTTTAGAGATTAACTAGGAAAGAGGCGGGCACTTATATTATTGAAAGGTAAGATTATTGTATGTTCAGAAATTTTGTCTTATAGATTAAGGGCAAATTAAAGTTTGGAAAAAAAAAAAA]

[+] EMBL AU030781             [GCGTCCGCAAAATTCCAAAT CTCCGGTCCAGATCGAGCACAGCTGTACGGAGCGCCTCTTCTCCGGGCCGCCGGCGCCAACTCCTCCGGCAGTCCGGCACTCCGGCTCTACGCTGCAGCCACACCGCCACCGCCAGCCGTTCCAGACGCGCGCGCCGCCGCT GTCCCGTCCCCTCCATCGGGCGTCGACGCGCCGCCGGAAGCCGCCGGTGTCGCGTTGCCCGGCGCCTGCAGCCGTCAACGCGGGCGTGGCGCCAGCAGCCGTCGTCTCGCGGCCGGGAGAAGCCGTCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCATCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCGTCGCCTGGTTTGATATCTAGTGTGCTGATTTGTTGATCCATGACTAATAGTTGTT AAGTGGATTA TTTTCGAAAAATACTGATGTGCTGTATTGCTCAAGTGTTGATTTGTGTTTCTTTGCATTTATATATGTATGGTATGGAGTTTGGACTTTAGAGATTAACTAGGAAAGAGGCGGGCACTTATATTATTGAAAGGTAAGATTATTGTATGTTCAGAAATTTTGTCTTATAGATTAAGGGCAAATTAAAGTTTGGAAAAAAAAAAAA]
[+] EMBL AU090496             [                AAATCCTCCGGTCCAGATCGAGCACAGCTGTACGGAGCGCCTCTTCTCCGGGCCGCCGGCGCCAACTCCTCCGGCAGTCCGGCACTCCGGCTCTACGCTGCAGCCACACCGCCACCGCCAGCCGTTCCAGACGCGCGCGCCGCCGCT GTCCCGTCCCCTCCATCGGGCGTCGACGCGCCGCCGGAAGCCGCCGGTGTNGCGTTGCCCGGCGCCTGCAGCCGTCAACGCGGGCGTGGCGCCANAAGCCGTCGTCTCGCGGCCGGGAGAAGCCGTCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCATCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCGTCGCCTGGTTTGATATCTAGTGTGCTGATTTGTTGATCCATGACTAATAGTTGTTAAAGTGGATTATTTTTCGAAAAATACTGATGTGCTGTATTGCTCAAATGTT                                                                                                                                                                     ]
[+] EMBL AU057519             [                      TCCGGTCCAGATCGAGCACAGCTGTACGGAGCGCCTCTTCTCCGGGCCGCCGGCGCCAACTCCTCCGGCAGTCCGGCACTCCGGCTCTACGCTGCAGCCACACCGCCACCGCCAGCCGTTCCAGACGCGCGCGCCGCCGCTGGTCCCGTCCCCTCCATCGGGCGTCGACGCGCCGCCGGAAGCCGCCGGTGTCGCGTTGCCCGGCGCCTGCAGCCGTCAACGCGGGCGTGGCGCCAGCAGCCGTCGTCTCGCGGCCGGGAGAAGCCGTCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCATCGCCGGGAGCACGCCATCCGTCGG                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU057520             [                                                     CGCTTCTTCTCCGGCCCGCCGGCGCCAACTCCTCCGGCAGTCCGGCACTCCGGCTCTACGCTGCAGCCACACCGCCACCGCCAGCCTTTCCAGACGCGCGCGCCGCCGCT GTCCCGTCCCCTCCATCGGGCGTCGACGCGCCGCCGGAAGCCGCCGGTGTCGCGTTGCCCGGCGCCTGCAGCCGTCAACGCGGGCNTGGCGCCAGCAGCCGTCGTCTCGCGGCCGGGAGAAGCCGTCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCATCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCGTCGCCTGGTTTGATATCTAGTGTGCTGATTTGTTGATCCATGACTAATAGTTGTT AAGTGGATTA TTTTCGAAAAATACTGATGTGCTGTATTGCTCAAGTGTTGATTTGTGTTTCTTTGCATTTATATATGTATGGTATGGAGTTTGGACTTTAGAGATTAACTAGGAAAGAGGCGGGCACTTATATTATTGAAAGGTAAGATTATTGTATGTTCAGAAATTTTGTCTTATAGATTAAGGGCAAATTAAAGTT   AAAAAA      ]




>consensus_6846#0
GCGTCCGCAAAATTCCAAATCTCCGGTCCAGATCGAGCACAGCTGTACGGAGCGCCTCTT
CTCCGGGCCGCCGGCGCCAACTCCTCCGGCAGTCCGGCACTCCGGCTCTACGCTGCAGCC
ACACCGCCACCGCCAGCCGTTCCAGACGCGCGCGCCGCCGCTGTCCCGTCCCCTCCATCG
GGCGTCGACGCGCCGCCGGAAGCCGCCGGTGTCGCGTTGCCCGGCGCCTGCAGCCGTCAA
CGCGGGCGTGGCGCCAGCAGCCGTCGTCTCGCGGCCGGGAGAAGCCGTCGCCGGGAGCAC
GCCATCCGTCGGGAGCCGCCATCGCCGGGAGCACGCCATCCGTCGGGAGCCGCCGTCGCC
TGGTTTGATATCTAGTGTGCTGATTTGTTGATCCATGACTAATAGTTGTTAAGTGGATTA
TTTTCGAAAAATACTGATGTGCTGTATTGCTCAAGTGTTGATTTGTGTTTCTTTGCATTT
ATATATGTATGGTATGGAGTTTGGACTTTAGAGATTAACTAGGAAAGAGGCGGGCACTTA
TATTATTGAAAGGTAAGATTATTGTATGTTCAGAAATTTTGTCTTATAGATTAAGGGCAA
ATTAAAGTTTGGAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case