These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6847#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1762 fasta sequence [CTCGTACCATTTTCGCTGTTGGTCTTTATTGCAGCAGCTGCTGCTGTTGCTCGTGCTGAGCTGAGCTGAACCTGCCAATCTGCAACACTGCAATCGTTAGCAAGTTCGCTCAACTGGCCAGCTGCTACAGATATATCTGCTGATAATTGAGCCCCAACCACCTTTCTCTTCCCCCTTTAAACTTCCCTGGTCTCCGTCCTCTTCGATCTCCTCTGCCGTCGATCTCATCGGAAGAGAGCGCCAAGCAAGAAAGAATAATTATTCCTGAAGATTCCTCTTCTGCATGTTGAAGTGTACAAGACAGCCACAACAACTGAGGATATGAGCTGGTGGTGTTGCATTCCAAAATCCAAGAAAGGAGAGAATCCTTACTCTCATGGCGTTAGCGGTATTCCGCCTGAGAAAAACATAAGGCTTTTCTCTTATTCTGAGTTGAGATCAGCAACAGAAAACTTCAACCGCAGTAATAAAATTGGCCGAGGTGGCTTTGGGACAGTATACAAGGGAACTATTAGAAATGGGCGAGATGTTGCGGTGAAAGTTCTTTCTGCTGAATCCAGGCAGGGCGTTCGAGAATTTTTGACAGAAATTGATGTTATTACCAATGTGAAGCATCCCAACCTTGTTGAATTAATTGGCTGTTGTGTTGAAGGAAACAATCGAATTTTGGTATACGAGTATTTAGAAAACAGCAGCCTTGACCGTGCATTGTTGGGTTCTAATAGCGAACCTGCAAATTTTACTTGGAGCATAAGATCTGCTATATGCATAGGAATCGCCAAAGGACTTGCATACCTGCATGAAGAGATTGCGTCACCGATTGTGCACAGAGATATCAAGGCTAGCAATATACTTCTTGACAAGCTTTACAACCCCAAGATCGGGGACTTCGGTTTAGCCAAGTTATTCCCTGATAATATCACCCACATCAGTACCCGTGTTGCTGGAACGACAGGCTACCTTGCACCGGAATATGCATGGCATGGCCAATTGACGAAGAGAGCCGATATATACAGTTTTGGCGTCCTTGTACTTGAGATCGTAAGTGGCAAGAGTAGTTCAAGGAGTCTCCTGGCTGACGATAAGATTCTCCTAGAGAAGGCATGGGAGCTACATGAGGTAGGGAAGCTCAAGGAGCTGGTGGATTCAGAAATGGGAGATTACCCTGAAGAGGAGGTCCTCCGGTACATCAAGACGGCCCTCTTCTGCACGCAGGCGGCGGCGGCGCGGCGGCCGTCGATGCCGCAGGTGGTGACGATGCTGTCCAAGCCCATCCGCATCAACGAGCGCGAGCTCACGGCGCCGGGCTACATCCACGACTACAATGGCACGGTCTCCAAGGCCACCAACTCCAGCAACTCGAGGTTCAAGCACTCGGCGTCCGACACCTCCGACATGTTCAGCA-CGGTGGTGCCACCCA-CGGTGTCCGAGATCAGCCCAAGGTGAAAATGGAAGGAAAACATCACCAGGCTGATTGATGCTGATGCTGGGTCTATGTTTCTTGTCTTACCTTTGCATGTTGAGTTGAGTGACAGTGCATAGAGGGCACACGTTTAGATGTGTGCCAATTGTGAATCGTGTTGTTTCTTTCCATTCCTTGTGCAAATTGCGGCATCTAGATCTTG-TAAATAGTAGTAGGTTGATCCTGACTTGTTTACGTCAGAGCAATTCAAGATCGCTGCTTGTTGGACATTAATTTTGGGGGCAATTGAACAGAACAGCTTCTGTAGACATGGCACACGGAGAGAGAAATCGTGTATAA] [+] EMBL AK100266 [CTCGTACCATTTTCGCTGTTGGTCTTTATTGCAGCAGCTGCTGCTGTTGCTCGTGCTGAGCTGAGCTGAACCTGCCAATCTGCAACACTGCAATCGTTAGCAAGTTCGCTCAACTGGCCAGCTGCTACAGATATATCTGCTGATAATTGAGCCCCAACCACCTTTCTCTTCCCCCTTTAAACTTCCCTGGTCTCCGTCCTCTTCGATCTCCTCTGCCGTCGATCTCATCGGAAGAGAGCGCCAAGCAAGAAAGAATAATTATTCCTGAAGATTCCTCTTCTGCATGTTGAAGTGTACAAGACAGCCACAACAACTGAGGATATGAGCTGGTGGTGTTGCATTCCAAAATCCAAGAAAGGAGAGAATCCTTACTCTCATGGCGTTAGCGGTATTCCGCCTGAGAAAAACATAAGGCTTTTCTCTTATTCTGAGTTGAGATCAGCAACAGAAAACTTCAACCGCAGTAATAAAATTGGCCGAGGTGGCTTTGGGACAGTATACAAGGGAACTATTAGAAATGGGCGAGATGTTGCGGTGAAAGTTCTTTCTGCTGAATCCAGGCAGGGCGTTCGAGAATTTTTGACAGAAATTGATGTTATTACCAATGTGAAGCATCCCAACCTTGTTGAATTAATTGGCTGTTGTGTTGAAGGAAACAATCGAATTTTGGTATACGAGTATTTAGAAAACAGCAGCCTTGACCGTGCATTGTTGGGTTCTAATAGCGAACCTGCAAATTTTACTTGGAGCATAAGATCTGCTATATGCATAGGAATCGCCAAAGGACTTGCATACCTGCATGAAGAGATTGCGTCACCGATTGTGCACAGAGATATCAAGGCTAGCAATATACTTCTTGACAAGCTTTACAACCCCAAGATCGGGGACTTCGGTTTAGCCAAGTTATTCCCTGATAATATCACCCACATCAGTACCCGTGTTGCTGGAACGACAGGCTACCTTGCACCGGAATATGCATGGCATGGCCAATTGACGAAGAGAGCCGATATATACAGTTTTGGCGTCCTTGTACTTGAGATCGTAAGTGGCAAGAGTAGTTCAAGGAGTCTCCTGGCTGACGATAAGATTCTCCTAGAGAAGGCATGGGAGCTACATGAGGTAGGGAAGCTCAAGGAGCTGGTGGATTCAGAAATGGGAGATTACCCTGAAGAGGAGGTCCTCCGGTACATCAAGACGGCCCTCTTCTGCACGCAGGCGGCGGCGGCGCGGCGGCCGTCGATGCCGCAGGTGGTGACGATGCTGTCCAAGCCCATCCGCATCAACGAGCGCGAGCTCACGGCGCCGGGCTACATCCACGACTACAATGGCACGGTCTCCAAGGCCACCAACTCCAGCAACTCGAGGTTCAAGCACTCGGCGTCCGACACCTCCGACATGTTCAGCA CGGTGGTGCCACCCA CGGTGTCCGAGATCAGCCCAAGGTGAAAATGGAAGGAAAACATCACCAGGCTGATTGATGCTGATGCTGGGTCTATGTTTCTTGTCTTACCTTTGCATGTTGAGTTGAGTGACAGTGCATAGAGGGCACACGTTTAGATGTGTGCCAATTGTGAATCGTGTTGTTTCTTTCCATTCCTTGTGCAAATTGCGGCATCTAGATCTTG TAAATAGTAGTAGGTTGATCCTGACTTGTTTACGTCAGAGCAATTCAAGATCGCT ] [+] EMBL AK071300 [ GTACCATTTTCGCTGTTGGTCTTTATTGCAGCAGCTGCTGCTGTTGCTCGTGCTGAGCTGAGCTGAACCTGCCAATCTGCAACACTGCAATCGTTAGCAAGTTCGCTCAACTGGCCAGCTGCTACAGATATATCTGCTGATAATTGAGCCCCAACCACCTTTCTCTTCCCCCTTTAAACTTCCCTGGTCTCCGTCCTCTTCGATCTCCTCTGCCGTCGATCTCATCGGAAGAGAGCGCCAAGCAAGAAAGAATAATTATTCCTGAAGATTCCTCTTCTGCATGTTGAAGTGTACAAGACAGCCACAACAACTGAGGATATGAGCTGGTGGTGTTGCATTCCAAAATCCAAGAAAGGAGAGAATCCTTACTCTCATGGCGTTAGCGGTATTCCGCCTGAGAAAAACATAGGGCTTTTCTCTTATTCTGAGTTGAGATCAGCAACAGAAAACTTCAACCGCAGTAATAAAATTGGCCGAGGTGGCTTTGGGACAGTATACAAGGGAACTATTAGAAATGGGCGAGATGTTGCGGTGAAAGTTCTTTCTGCTGAATCCAGGCAGGGCGTTCGAGAATTTTTGACAGAAATTGATGTTATTACCAATGTGAAGCATCCCAACCTTGTTGAATTAATTGGCTGTTGTGTTGAAGGAAACAATCGAATTTTGGTATACGAGTATTTAGAAAACAGCAGCCTTGACCGTGCATTGTTGGGTTCTAATAGCGAACCTGCAAATTTTACTTGGAGCATAAGATCTGCTATATGCATAGGAATCGCCAAAGGACTTGCATACCTGCATGAAGAGATTGCGTCACCGATTGTGCACAGAGATATCAAGGCTAGCAATATACTTCTTGACAAGCTTTACAACCCCAAGATCGGGGACTTCGGTTTAGCCAAGTTATTCCCTGATAATATCACCCACATCAGTACCCGTGTTGCTGGAACGACAGGCTACCTTGCACCGGAATATGCATGGCATGGCCAATTGACGAAGAGAGCCGATATATACAGTTTTGGCGTCCTTGTACTTGAGATCGTAAGTGGCAAGAGTAGTTCAAGGAGTCTCCTGGCTGACGATAAGATTCTCCTAGAGAAGGCATGGGAGCTACATGAGGTAGGGAAGCTCAAGGAGCTGGTGGATTCAGAAATGGGAGATTACCCTGAAGAGGAGGTCCTCCGGTACATCAAGACGGCCCTCTTCTGCACGCAGGCGGCGGCGGCGCGGCGGCCGTCGATGCCGCAGGTGGTGACGATGCTGTCCAAGCCCATCCGCATCAACGAGCGCGAGCTCACGGCGCCGGGCTACATCCACGACTACAATGGCACGGTCTCCAAGGCCACCAACTCCAGCAACTCGAGGTTCAAGCACTCGGCGTCCGACACCTCCGACATGTTCAGCA CGGTGGTGCCACCCA CGGTGTCCGAGATCAGCCCAAGGTGAAAATGGAAGGAAAACATCACCAGGCTGATTGATGCTGATGCTGGGTCTATGTTTCTTGTCTTACCTTTGCATGTTGAGTTGAGTGACAGTGCATAGAGGGCACACGTTTAGATGTGTGCCAATTGTGAATCGTGTTGTTTCTTTCCATTCCTTGTGCAAATTGCGGCATCTAGATCTTG TAAATAGTAGTAGGTTGATCCTGACTTGTTTACGTCAGAGCAATTCAAGATCGCTGCTTGTTGGACATTAATTTTGGGGGCAATTGAACAGAACAGCTTCTGTAGAC ] [+] EMBL AK104911 [ GCTGCTGCTGTTGCTCGTGCTGAGCTGAGCTGAACCTGCCAATCTGCAACACTGCAATCGTTAGCAAGTTCGCTCAACTGGCCAGCTGCTACAGATATATCTGCTGATAATTGAGCCCCAACCACCTTTCTCTTCCCCCTTTAAACTTCCCTGGTCTCCGTCCTCTTCGATCTCCTCTGCCGTCGATCTCATCGGAAGAGAGCGCCAAGCAAGAAAGAATAATTATTCCTGAAGATTCCTCTTCTGCATGTTGAAGTGTACAAGACAGCCACAACAACTGAGGATATGAGCTGGTGGTGTTGCATTCCAAAATCCAAGAAAGGAGAGAATCCTTACTCTCATGGCGTTAGCGGTATTCCGCCTGAGAAAAACATAAGGCTTTTCTCTTATTCTGAGTTGAGATCAGCAACAGAAAACTTCAACCGCAGTAATAAAATTGGCCGAGGTGGCTTTGGGACAGTATACAAGGGAACTATTAGAAATGGGCGAGATGTTGCGGTGAAAGTTCTTTCTGCTGAATCCAGGCAGGGCGTTCGAGAATTTTTGACAGAAATTGATGTTATTACCAATGTGAAGCATCCCAACCTTGTTGAATTAATTGGCTGTTGTGTTGAAGGAAACAATCGAATTTTGGTATACGAGTATTTAGAAAACAGCAGCCTTGACCGTGCATTGTTGGGTTCTAATAGCGAACCTGCAAATTTTACTTGGAGCATAAGATCTGCTATATGCATAGGAATCGCCAAAGGACTTGCATACCTGCATGAAGAGATTGCGTCACCGATTGTGCACAGAGATATCAAGGCTAGCAATATACTTCTTGACAAGCTTTACAACCCCAAGATCGGGGACTTCGGTTTAGCCAAGTTATTCCCTGATAATATCACCCACATCAGTACCCGTGTTGCTGGAACGACAGGCTACCTTGCACCGGAATATGCATGGCATGGCCAATTGACGAAGAGAGCCGATATATACAGTTTTGGCGTCCTTGTACTTGAGATCGTAAGTGGCAAGAGTAGTTCAAGGAGTCTCCTGGCTGACGATAAGATTCTCCTAGAGAAGGCATGGGAGCTACATGAGGTAGGGAAGCTCAAGGAGCTGGTGGATTCAGAAATGGGAGATTACCCTGAAGAGGAGGTCCTCCGGTACATCAAGACGGCCCTCTTCTGCACGCAGGCGGCGGCGGCGCGGCGGCCGTCGATGCCGCAGGTGGTGACGATGCTGTCCAAGCCCATCCGCATCAACGAGCGCGAGCTCACGGCGCCGGGCTACATCCACGACTACAATGGCACGGTCTCCAAGGCCACCAACTCCAGCAACTCGAGGTTCAAGCACTCGGCGTCCGACACCTCCGACATGTTCAGCA CGGTGGTGCCACCCA CGGTGTCCGAGATCAGCCCAAGGTGAAAATGGAAGGAAAACATCACCAGGCTGATTGATGCTGATGCTGGGTCTATGTTTCTTGTCTTACCTTTGCATGTTGAGTTGAGTGACAGTGCATAGAGGGCACACGTTTAGATGTGTGCCAATTGTGAATCGTGTTGTTTCTTTCCATTCCTTGTGCAAATTGCGGCATCTAGATCTTG TAAATAGTAGTAGGTTGATCCTGACTTGTTTACGTCAGAGCAATTCAAGATCGCTGCTT ] [+] EMBL BI805808 [ ATGGCACGGTCTCCAAGGCCACCAACTCCAGCAACTCGAGGTTCAAGCACTCGGCGTCCGACACCTCCGACATGTTCAGCACCGGTGGTGCCACCCACCGGTGTCCGAGATCAGCCCAAGGTGAAAATGGAAGGAAAACATCACCAGGCTGATTGATGCTGATGCTGGGTCTATGTTTCTTGTCTTACCTTTGCATGTTGAGTTGAGTGACAGTGCATAGAGGGCACACGTTTAGATGTGTGCCAATTGTGAATCGTGTTGTTTCTTTCCATTCCTTGTGC AATTGCGGCATCTAGATCTTGCTAAATAGTAGTAGGTTGATCCTGACTTGTTTACGTCAGA C ATTCAAGATCGCTGCTTGTTGGACATTAATTTT GGGGCCATTGAACAGAACAGCTTCTGTAGACATGGCACACGGAGAGAGAAATCGTGTATAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||