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Oryza sativa
cluster # 687 cluster # 687       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_687#0 length = 2783 sequences # 2  

consensusID : consensus_687#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2783
fasta sequence
                              [TTCGCCTCGCCTCGCCTCTCCTCCAAGAGCGCAACCGTAAAAAAAGAAAAAAAAAAAAAAAACCCGAGGCGGCGAGCTCTCGGGCTGCTTCCGGCTCCGTCCGTAGCGGCGAGGAGGGGGCGGAGGGCCATTGGCGCGGCGGCCCGCGCGAGGCGCGCTTGCATTGTTGGTGGCGGCGGCGGGGGGTCGACGGGGTGGAGGGCGTGTTTTTTTGTTGGCTTGGGGTGGAGGCGGGGGATGTCTTGCTCGAAGGTGCTTCTGTCGAAGAAGGGGGTGCTGGGGACGGTGTGGGTGGCGGCGGTCAGCGGCGTGGCGGCGCTCAGCCGGGACCAGGTGGTTCGCACCAACGTCGTCGCCTGCGTCGATAAGATTTTGCCTGATGACAACGACAAAACCACATACAGAGTATTGGGACTGCTTCTGCTTGGCATTGTTAGGATTTATTCCAAGAAAGTGGAATACCTCTGCCATGAATGCAATGAGCTTCTTGGATCATATGGATCAGCACATTGCAATGAACTAAGTATCCCAACTGGAGGAGCAACAAATAGAGTTTCAAAGCAAGCGAAGAAACCTGTTCGCGCAAGAAGATTAGTTGTAAGACAAGAAGGTGCTTACAAGGTAAAAATACCTATGCAAGCTGTGCGAACAACTAGAGCAGAAACAAGAGCTACTTCACAGATAACTGAAGTTCGAGACACACATGCTACACCTGATCTTCCAACTTTCACAATACCCAAAAGATTTGAGCTTGACTCTTTTGATTTGGGGATTCCTGAAGATAGGGATGATGATGACGTGGATCATCACCAATTGCCACATCAAGGTACCATGTTGGAAGATGAGAATCACCATACATCCTGTTTGTTTGAGTCTTATAAGATGATGACATGCTCATACGCTGATCTAGACTCTGCCTGCATTATGCCAGTACGCGTCACTATCCCAACTGAAATGATGAGTGTCATTAGTGAAGTCAACAGTCTACTATGCTTGAGTAGCATTGGGGGTGAACCTGAAAATCACAATGCTGAATCTGCTTGCTTTACACCAGTGAAGGATATTCTTCCACCTGAGATGGTGGATATGATGGCTGAAGTAAATGATCCTTCAGATAAAAGCACAAGGGGGAAAAAACCTCAAAGAGAATTGAATAGGGATGAGAATGGGAATTCTGCTTGCCACATCCCTTTGTCAGGAAGTAAGGAAGTGCAAATACCTGAAAATATTGTGGAGAATGTGACTTTTCCAAGTCGTGATGCAAATTGTCCCACAATTGAAGAATCAGAAAATGGGTCACTGCATGGAACTAACACAAATCCATCATGTGATGGTTTTGAGGAACCCGGGTCTCTTGAACAACCAACTTTGCGCTGTAAGACAAAGCTAATCAATGAGCTGTCACCTTCCACTCCGGAGCCCATGACAGAGGGTGGCACAGGGCTACCCTGCTCTCCTAAATTTATGGTTACTACACCAGCTAAAAAGGAGAAGCACCGGGTGACTAGAAAACGAAGAAGGGGATTATACAATAAAGATTATATACCAACAGATAGAGGAGACAAACGGAAGGTTAGAAGAAGAGGAACATGGGTATTGTATGATGAAAATATTGTTCTACCAAATGAAACATTGAGAAACACAATAGAGGATGCAAGTGATCTAGTGCAGCAGAGAAGGAAGGCACCTCATACTTGTCTTTATACCTGGAAGGAGGGCAAAATTCGTTCTCTGCCAGTTACTTTCATGGATCCATTGATTTTGTATCCAACTTCGGTGTACGTTAGACACACTATTACAGCAGATACACCAGAAAATTCGTGCAGGGAGTCAGTAAAATCAAGAAGGCGACTTTCGTTGGAGCTTTCTGAATCCAACAATATCTGCGATGATGCTAAAAATGTAGAAGGTGAAAGCATTCCAGATGAACCAAGAAAGAGAAAATTGGATGAATTGACAGATAGTGTACAGGCAACTGTTGGGTGTTACACTGAAAGTGCACAGTATCACAATGATGAAGACTATAGATTTAATGACGATACAGTCAAAGAAAAGGATTTCTCAATTGGAGGACATGAATCTCATTCAACAGAACTGCAAGAAAGATTGAATGCATTGAAAAGTAAAAATCCACAGCTCGACGAGGCATTGGATGCTGATATAGATAGTATGGAAGAGGATACTCATATGGATGAACAACATGCTAGAGATGAAGGTTTGCTGCGTTCAACAAGAACAAGGACTGTAGCAAGGTACTTCCATCAACTACTCGTGGACCAGAAGTGCCAACAACGGAACAATTCTGTATGCCTTGGTCAAGCACTCGAAGGAACGAAAAGAAAAACTTCAGCAAGATTCTTCTATGAAACTCTGATCCTGAAGAGTGGTAGTCTCATAGAAGTCAATCAAGAGCAGACTTATGGGGACATCATAGTCTCAGCGACTCCGCGGCTCGAGGCGGCATTGCGGAGTAGTGAGAAGCAATGACTTAATTTGACGCAACATGTTCATTGGTAGTTTTCGGGAAAAAGAGATCCCAGCTTCCCAGGAGCGTTTCACCTTGTTTTATCTTCTGTAGCATGTTTATGATGGTCAGTCAGATGTATATACTTAGTTGGGCGCATGTAGCGCTAGATGGTTAGGAACATGTAGAGATGTTAGTTGTTTCCCCCTTTTTTTTCCCCTTTAGATGGATAGCTTAGTTATTTATAATAACTTTAACAGTTGTAAATTGCAGTTTCCTATCAGTGTTAGATCCCGAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK073406             [TTCGCCTCGCCTCGCCTCTCCTCCAAGAGCGCAACCGTAAAAAAAGAAAAAAAAAAAAAAAACCCGAGGCGGCGAGCTCTCGGGCTGCTTCCGGCTCCGTCCGTAGCGGCGAGGAGGGGGCGGAGGGCCATTGGCGCGGCGGCCCGCGCGAGGCGCGCTTGCATTGTTGGTGGCGGCGGCGGGGGGTCGACGGGGTGGAGGGCGTGTTTTTTTGTTGGCTTGGGGTGGAGGCGGGGGATGTCTTGCTCGAAGGTGCTTCTGTCGAAGAAGGGGGTGCTGGGGACGGTGTGGGTGGCGGCGGTCAGCGGCGTGGCGGCGCTCAGCCGGGACCAGGTGGTTCGCACCAACGTCGTCGCCTGCGTCGATAAGATTTTGCCTGATGACAACGACAAAACCACATACAGAGTATTGGGACTGCTTCTGCTTGGCATTGTTAGGATTTATTCCAAGAAAGTGGAATACCTCTGCCATGAATGCAATGAGCTTCTTGGATCATATGGATCAGCACATTGCAATGAACTAAGTATCCCAACTGGAGGAGCAACAAATAGAGTTTCAAAGCAAGCGAAGAAACCTGTTCGCGCAAGAAGATTAGTTGTAAGACAAGAAGGTGCTTACAAGGTAAAAATACCTATGCAAGCTGTGCGAACAACTAGAGCAGAAACAAGAGCTACTTCACAGATAACTGAAGTTCGAGACACACATGCTACACCTGATCTTCCAACTTTCACAATACCCAAAAGATTTGAGCTTGACTCTTTTGATTTGGGGATTCCTGAAGATAGGGATGATGATGACGTGGATCATCACCAATTGCCACATCAAGGTACCATGTTGGAAGATGAGAATCACCATACATCCTGTTTGTTTGAGTCTTATAAGATGATGACATGCTCATACGCTGATCTAGACTCTGCCTGCATTATGCCAGTACGCGTCACTATCCCAACTGAAATGATGAGTGTCATTAGTGAAGTCAACAGTCTACTATGCTTGAGTAGCATTGGGGGTGAACCTGAAAATCACAATGCTGAATCTGCTTGCTTTACACCAGTGAAGGATATTCTTCCACCTGAGATGGTGGATATGATGGCTGAAGTAAATGATCCTTCAGATAAAAGCACAAGGGGGAAAAAACCTCAAAGAGAATTGAATAGGGATGAGAATGGGAATTCTGCTTGCCACATCCCTTTGTCAGGAAGTAAGGAAGTGCAAATACCTGAAAATATTGTGGAGAATGTGACTTTTCCAAGTCGTGATGCAAATTGTCCCACAATTGAAGAATCAGAAAATGGGTCACTGCATGGAACTAACACAAATCCATCATGTGATGGTTTTGAGGAACCCGGGTCTCTTGAACAACCAACTTTGCGCTGTAAGACAAAGCTAATCAATGAGCTGTCACCTTCCACTCCGGAGCCCATGACAGAGGGTGGCACAGGGCTACCCTGCTCTCCTAAATTTATGGTTACTACACCAGCTAAAAAGGAGAAGCACCGGGTGACTAGAAAACGAAGAAGGGGATTATACAATAAAGATTATATACCAACAGATAGAGGAGACAAACGGAAGGTTAGAAGAAGAGGAACATGGGTATTGTATGATGAAAATATTGTTCTACCAAATGAAACATTGAGAAACACAATAGAGGATGCAAGTGATCTAGTGCAGCAGAGAAGGAAGGCACCTCATACTTGTCTTTATACCTGGAAGGAGGGCAAAATTCGTTCTCTGCCAGTTACTTTCATGGATCCATTGATTTTGTATCCAACTTCGGTGTACGTTAGACACACTATTACAGCAGATACACCAGAAAATTCGTGCAGGGAGTCAGTAAAATCAAGAAGGCGACTTTCGTTGGAGCTTTCTGAATCCAACAATATCTGCGATGATGCTAAAAATGTAGAAGGTGAAAGCATTCCAGATGAACCAAGAAAGAGAAAATTGGATGAATTGACAGATAGTGTACAGGCAACTGTTGGGTGTTACACTGAAAGTGCACAGTATCACAATGATGAAGACTATAGATTTAATGACGATACAGTCAAAGAAAAGGATTTCTCAATTGGAGGACATGAATCTCATTCAACAGAACTGCAAGAAAGATTGAATGCATTGAAAAGTAAAAATCCACAGCTCGACGAGGCATTGGATGCTGATATAGATAGTATGGAAGAGGATACTCATATGGATGAACAACATGCTAGAGATGAAGGTTTGCTGCGTTCAACAAGAACAAGGACTGTAGCAAGGTACTTCCATCAACTACTCGTGGACCAGAAGTGCCAACAACGGAACAATTCTGTATGCCTTGGTCAAGCACTCGAAGGAACGAAAAGAAAAACTTCAGCAAGATTCTTCTATGAAACTCTGATCCTGAAGAGTGGTAGTCTCATAGAAGTCAATCAAGAGCAGACTTATGGGGACATCATAGTCTCAGCGACTCCGCGGCTCGAGGCGGCATTGCGGAGTAGTGAGAAGCAATGACTTAATTTGACGCAACATGTTCATTGGTAGTTTTCGGGAAAAAGAGATCCCAGCTTCCCAGGAGCGTTTCACCTTGTTTTATCTTCTGTAGCATGTTTATGATGGTCAGTCAGATGTATATACTTAGTTGGGCGCATGTAGCGCTAGATGGTTAGGAACATGTAGAGATGTTAGTTGTTTCCCCCTTTTTTTTCCCCTTTAGATGGATAGCTTAGTTATTTATAATAACTTTAACAGTTGTAAATTGCAGTTTCCTATCAGTGTTAGATCCCG                       ]
[+] EMBL AY371047             [                                                                                                                                                                                                                     GTTGGCTTGGGGTGGAGGCGGGGGATGTCTTGCTCGAAGGTGCTTCTGTCGAAGAAGGGGGTGCTGGGGACGGTGTGGGTGGCGGCGGTCAGCGGCGTGGCGGCGCTCAGCCGGGACCAGGTGGTTCGCACCAACGTCGTCGCCTGCGTCGATAAGATTTTGCCTGATGACAACGACAAAACCACATACAGAGTATTGGGACTGCTTCTGCTTGGCATTGTTAGGATTTATTCCAAGAAAGTGGAATACCTCTGCCATGAATGCAATGAGCTTCTTGGATCATATGGATCAGCACATTGCAATGAACTAAGTATCCCAACTGGAGGAGCAACAAATAGAGTTTCAAAGCAAGCGAAGAAACCTGTTCGCGCAAGAAGATTAGTTGTAAGACAAGAAGGTGCTTACAAGGTAAAAATACCTATGCAAGCTGTGCGAACAACTAGAGCAGAAACAAGAGCTACTTCACAGATAACTGAAGTTCGAGACACACATGCTACACCTGATCTTCCAACTTTCACAATACCCAAAAGATTTGAGCTTGACTCTTTTGATTTGGGGATTCCTGAAGATAGGGATGATGATGACGTGGATCATCACCAATTGCCACATCAAGGTACCATGTTGGAAGATGAGAATCACCATACATCCTGTTTGTTTGAGTCTTATAAGATGATGACATGCTCATACGCTGATCTAGACTCTGCCTGCATTATGCCAGTACGCGTCACTATCCCAACTGAAATGATGAGTGTCATTAGTGAAGTCAACAGTCTACTATGCTTGAGTAGCATTGGGGGTGAACCTGAAAATCACAATGCTGAATCTGCTTGCTTTACACCAGTGAAGGATATTCTTCCACCTGAGATGGTGGATATGATGGCTGAAGTAAATGATCCTTCAGATAAAAGCACAAGGGGGAAAAAACCTCAAAGAGAATTGAATAGGGATGAGAATGGGAATTCTGCTTGCCACATCCCTTTGTCAG   GTAAGGAAGTGCAAATACCTGAAAATATTGTGGAGAATGTGACATTTCCAAGTCGTGATGCAAATTGTCCCACAATTGAAGAATCAGAAAATGGGTCACTGCATGGAACTAACACAAATCCATCATGTGATGGTTTTGAGGAACCCGGGTCTCTTGAACAACCAACTTTGCGCTGTAAGACAAAGCTAATCAATGAGCTGTCACCTTCCACTCCGGAGCCCATGACAGAGGGTGGCACAGGGCTACCCTGCTCTCCTAAATTTATGGTTACTACACCAGCTAAAAAGGAGAAGCACCGGGTGACTAGAAAACGAAGAAGGGGATTATACAATAAAGATTATATACCAACAGATAGAGGAGACAAACGGAAGGTTAGAAGAAGAGGAACATGGGTATTGTATGATGAAAATATTGTTCTACCAAATGAAACATTGAGAAACACAATAGAGGATGCAAGTGATCTAGTGCAGCAGAGAAGGAAGGCACCTCATACTTGTCTTTATACCTGGAAGGAGGGCAAAATTCGTTCTCTGCCAGTTACTTTCATGGATCCATTGATTTTGTATCCAACTTCGGTGTACGTTAGACACACTATTACAGCAGATACACCAGAAAATTCGTGCAGGGAGTCAGTAAAATCAAGAAGGCGACTTTCGTTGGAGCTTTCTGAATCCAACAATATCTGCGATGATGCTAAAAATGTAGAAGGTGAAAGCATTCCAGATGAACCAAGAAAGAGAAAATTGGATGAATTGACAGATAGTGTACAGGCAACTGTTGGGTGTTACACTGAAAGTGCACAGTATCACAATGATGAAGACTATAGATTTAATGACGATACAGTCAAAGAAAAGGATTTCTCAATTGGAGGACATGAATCTCACTCAACAGAACTGCAAGAAAGATTGAATGCATTGAAAAGTAAAAATCCACAGCTCGACGAGGCATTGGATGCTGATATAGATAGTATGGAAGAGGATACTCATATGGATGAACAACATGCTAGAGATGAAGGTTTGCTGCGTTCAACAAGAACAAGGACTGTAGCAAGGTACTTCCATCAACTACTCGTGGACCAGAAGTGCCAACAACGGAACAATTCTGTATGCCTTGGTCAAGCACTCGAAGGAACGAAAAGAAAAACTTCAGCAAGATTCTTCTATGAAACTCTGATCCTGAAGAGTGGTAGTCTCATAGAAGTCAATCAAGAGCAGACTTATGGGGACATCATAGTCTCAGCGACTCCGCGGCTCGAGGCGGCATTGCGGAGTAGTGAGAAGCAATGACTTAATTTGACGCAACATGTTCATTGGTAGTTTTCGGGAAAAAGAGATCCCAGCTTCCCAGGAGCGTTTCACCTTGTTTTATCTTCTGTAGCATGTTTATGATGGTCAGTCAGATGTATATACTTAGTTGGGCGCATGTAGCGCTAGATGGTTAGGAACATGTAGAGATGTTAGTTGTTTCCCCCTTTTTTTTCCCCTTTAGATGGATAGCTTAGTTATTTATAATAACTTTAACAGTTGTAAATTGCAGTTTCCTATCAGTGTTAGATCCAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_687#0 TTCGCCTCGCCTCGCCTCTCCTCCAAGAGCGCAACCGTAAAAAAAGAAAAAAAAAAAAAA AACCCGAGGCGGCGAGCTCTCGGGCTGCTTCCGGCTCCGTCCGTAGCGGCGAGGAGGGGG CGGAGGGCCATTGGCGCGGCGGCCCGCGCGAGGCGCGCTTGCATTGTTGGTGGCGGCGGC GGGGGGTCGACGGGGTGGAGGGCGTGTTTTTTTGTTGGCTTGGGGTGGAGGCGGGGGATG TCTTGCTCGAAGGTGCTTCTGTCGAAGAAGGGGGTGCTGGGGACGGTGTGGGTGGCGGCG GTCAGCGGCGTGGCGGCGCTCAGCCGGGACCAGGTGGTTCGCACCAACGTCGTCGCCTGC GTCGATAAGATTTTGCCTGATGACAACGACAAAACCACATACAGAGTATTGGGACTGCTT CTGCTTGGCATTGTTAGGATTTATTCCAAGAAAGTGGAATACCTCTGCCATGAATGCAAT GAGCTTCTTGGATCATATGGATCAGCACATTGCAATGAACTAAGTATCCCAACTGGAGGA GCAACAAATAGAGTTTCAAAGCAAGCGAAGAAACCTGTTCGCGCAAGAAGATTAGTTGTA AGACAAGAAGGTGCTTACAAGGTAAAAATACCTATGCAAGCTGTGCGAACAACTAGAGCA GAAACAAGAGCTACTTCACAGATAACTGAAGTTCGAGACACACATGCTACACCTGATCTT CCAACTTTCACAATACCCAAAAGATTTGAGCTTGACTCTTTTGATTTGGGGATTCCTGAA GATAGGGATGATGATGACGTGGATCATCACCAATTGCCACATCAAGGTACCATGTTGGAA GATGAGAATCACCATACATCCTGTTTGTTTGAGTCTTATAAGATGATGACATGCTCATAC GCTGATCTAGACTCTGCCTGCATTATGCCAGTACGCGTCACTATCCCAACTGAAATGATG AGTGTCATTAGTGAAGTCAACAGTCTACTATGCTTGAGTAGCATTGGGGGTGAACCTGAA AATCACAATGCTGAATCTGCTTGCTTTACACCAGTGAAGGATATTCTTCCACCTGAGATG GTGGATATGATGGCTGAAGTAAATGATCCTTCAGATAAAAGCACAAGGGGGAAAAAACCT CAAAGAGAATTGAATAGGGATGAGAATGGGAATTCTGCTTGCCACATCCCTTTGTCAGGA AGTAAGGAAGTGCAAATACCTGAAAATATTGTGGAGAATGTGACTTTTCCAAGTCGTGAT GCAAATTGTCCCACAATTGAAGAATCAGAAAATGGGTCACTGCATGGAACTAACACAAAT CCATCATGTGATGGTTTTGAGGAACCCGGGTCTCTTGAACAACCAACTTTGCGCTGTAAG ACAAAGCTAATCAATGAGCTGTCACCTTCCACTCCGGAGCCCATGACAGAGGGTGGCACA GGGCTACCCTGCTCTCCTAAATTTATGGTTACTACACCAGCTAAAAAGGAGAAGCACCGG GTGACTAGAAAACGAAGAAGGGGATTATACAATAAAGATTATATACCAACAGATAGAGGA GACAAACGGAAGGTTAGAAGAAGAGGAACATGGGTATTGTATGATGAAAATATTGTTCTA CCAAATGAAACATTGAGAAACACAATAGAGGATGCAAGTGATCTAGTGCAGCAGAGAAGG AAGGCACCTCATACTTGTCTTTATACCTGGAAGGAGGGCAAAATTCGTTCTCTGCCAGTT ACTTTCATGGATCCATTGATTTTGTATCCAACTTCGGTGTACGTTAGACACACTATTACA GCAGATACACCAGAAAATTCGTGCAGGGAGTCAGTAAAATCAAGAAGGCGACTTTCGTTG GAGCTTTCTGAATCCAACAATATCTGCGATGATGCTAAAAATGTAGAAGGTGAAAGCATT CCAGATGAACCAAGAAAGAGAAAATTGGATGAATTGACAGATAGTGTACAGGCAACTGTT GGGTGTTACACTGAAAGTGCACAGTATCACAATGATGAAGACTATAGATTTAATGACGAT ACAGTCAAAGAAAAGGATTTCTCAATTGGAGGACATGAATCTCATTCAACAGAACTGCAA GAAAGATTGAATGCATTGAAAAGTAAAAATCCACAGCTCGACGAGGCATTGGATGCTGAT ATAGATAGTATGGAAGAGGATACTCATATGGATGAACAACATGCTAGAGATGAAGGTTTG CTGCGTTCAACAAGAACAAGGACTGTAGCAAGGTACTTCCATCAACTACTCGTGGACCAG AAGTGCCAACAACGGAACAATTCTGTATGCCTTGGTCAAGCACTCGAAGGAACGAAAAGA AAAACTTCAGCAAGATTCTTCTATGAAACTCTGATCCTGAAGAGTGGTAGTCTCATAGAA GTCAATCAAGAGCAGACTTATGGGGACATCATAGTCTCAGCGACTCCGCGGCTCGAGGCG GCATTGCGGAGTAGTGAGAAGCAATGACTTAATTTGACGCAACATGTTCATTGGTAGTTT TCGGGAAAAAGAGATCCCAGCTTCCCAGGAGCGTTTCACCTTGTTTTATCTTCTGTAGCA TGTTTATGATGGTCAGTCAGATGTATATACTTAGTTGGGCGCATGTAGCGCTAGATGGTT AGGAACATGTAGAGATGTTAGTTGTTTCCCCCTTTTTTTTCCCCTTTAGATGGATAGCTT AGTTATTTATAATAACTTTAACAGTTGTAAATTGCAGTTTCCTATCAGTGTTAGATCCCG AAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)