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Oryza sativa
cluster # 6888 cluster # 6888       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6888#0 length = 807 sequences # 4  

consensusID : consensus_6888#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 807
fasta sequence
                              [ACATCAGCTAGACCAGTGTTATTGATCTCTTCTGTGAAACCCTTAGAGCAATTTCTTAAAAGAGACCGCAAGTTAGAGAATGAATGGAAAGAAGGGTAGTATAAGGATTGACATTTGCCTGAAACCAAAAGATGTGGTGCCAGAAGATGCAAAGAAGCCAATCAGTGAAGAAGGGCTTTCCCCAAGGAAATGGCTACATGATGTCTGGGACTTCGCCAGACAGGATACAAACAGGGTCACCTTTGCACTCAAGGTTGGCCTTGCTTGCCTCCTTGTGTCACTGCTCATACTCTTCCGTGCACCCTATGACATCTTTGGGGCTAACATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGGAGTATTTGCAGTAGTTGTTATTCAGGTGGCTATGTCTAGTGGCCATATTGCAGAACCATACATCATTGGTTTCAGCATATTTCTCATTGGTGCTGTAACATCATTTATGAAGCTATGGCCATCACTAGTTCCATATGAATATGGTTTTCGAGTTATCCTATTCACATATTGCTTGATCATCGTATCGGGCTACCGCATGGGAAATCCCATCAGGACTGCAATGGACAGACTCTACTCAATTGCGATCGGAGCCCTCATAGCCGTTTTAGTAAATGTCTTTATCTGCCCAATATGGGCAGGGGAGCAACTGCACAGGGAGCTAGTTAACAGCTTCAACTCTCTCGCAGACTCCTTAGAAGAGTGTGTCAAGAAGTATCTAAG]

[+] EMBL CB618459             [ACATCAGCTAGACCAGTGTTATTGATCTCTTCTGTGAAACCCTTAGAGCAATTTCTTAAAAGAGACCGCAAGTTAGAGAATGAATGGAAAGAAGGGTAGTATAAGGATTGACATTTGCCTGAAACCAAAAGATGTGGTGCCAGAAGATGCAAAGAAGCCAATCAGTGAAGAAGGGCTTTCCCCAAGGAAATGGCTACATGATGTCTGGGACTTCGCCAGACAGGATACAAACAGGGTCACCTTTGCACTCAAGGTTGGCCTTGCTTGCCTCCTTGTGTCACTGCTCATACTCTTCCGTGCACCCTATGACATCTTTGGGGCTAACATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGGAGTATTTGCAGTAGTTGTTATTCAGGTGGCTATGTCTAGTGGCCATATTGCAGAACCATACATCATTGGTTTCAGCATATTTCTCATTGGTGCTGTAACATCATTTATGAAGCTATGGCCATCACTAGTTCCATATGAATATGGTTTTCGAGTTATCCTATTCACATATTGCTTGATCATCGTATCGGGCTACCGCATGGGAAATCCCATCAGGACTGCAATGGACAGACTCTACTCAATTGCGATCGGAGCCCTCATAGCCGTTTTAGTAAATGTCTTTATCTGCCCAATATGGGCAGGGGAGCAACTGCACAGGGAGCTAGTTAACAGCTTCAACTCTCTCGCAGACTCCTTAGAAGAGTGTGTCAAGAAGTATCTAAG]
[+] EMBL CB618378             [ACATCCTTTAGACCAGTGTTATTGATCTCTTCTGTGAAACCCTTAGAGCAATTTCTTAAAAGAGACCGCAAGTTAGAGAATGAATGGAAAGAAGGGTAGTATAAGGATTGACATTTGCCTGAAACCAAAAGATGTGGTGCCAGAAGATGCAAAGAAGCCAATCAGTGAAGAAGGGCTTTCCCCAAGGAAATGGCTACATGATGTCTGGGACTTCGCCAGACAGGATACAAACAGGGTCACCTTTGCACTCAAGGTTGGCCTTGCTTGCCTCCTTGTGTCACTGCTCATACTCTTCCGTGCACCCTATGACATCTTTGGGGCTAACATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGGAGTATTTGCAGTAGTTGTTATTCAGGTGGCTATGTCTAGTGGCCATATTGCAGAACCATACATCATTGGTTTCAGCATATTTCTCATTGGTGCTGTAACATCATTTATGAAGCTATGGCCATCACTAGTTCCATATGAATATGGTTTTCGAGTTATCCTATTCACATATTGCTTGATCATCGTATCGGGCTACCGCATGGGAAATCCCATCAGGACTGCAATGGACAGACTCTACTCAATTGCGATCGGAGCCCTCATAGCCGTTTTAGTAAATGTCTTTATCTGCCCAATATGGGCAGGGGAGCAACTGCACAGGGAGCTAGTTAACAGCTTCAACTCTCTCGCAGACTCCTTAGAAGAGTGTGTCAAGAAGTA      ]
[+] EMBL CB618455             [ACATCAGCTAGACCAGTGTTATTGATCTCTTCTGTGAAACCCTTAGAGCAATTTCTTAAAAGAGACCGCAAGTTAGAGAATGAATGGAAAGAAGGGTAGTATAAGGATTGACATTTGCCTGAAACCAAAAGATGTGGTGCCAGAAGATGCAAAGAAGCCAATCAGTGAAGAAGGGCTTTCCCCAAGGAAATGGCTACATGATGTCTGGGACTTCGCCAGACAGGATACAAACAGGGTCACCTTTGCACTCAAGGTTGGCCTTGCTTGCCTCCTTGTGTCACTGCTCATACTCTTCCGTGCACCCTATGACATCTTTGGGGCTAACATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGGAGTATTTGCAGTAGTTGTTATTCAGGTGGCTATGTCTAGTGGCCATATTGCAGAACCATACATCATTGGTTTCAGCATATTTCTCATTGGTGCTGTAACATCATTTATGAAGCTATGGCCATCACTAGTTCCATATGAATATGGTTTTCGAGTTATCCTATTCACATATTGCTTGATCATCGTATCGGGCTACCGCATGGGAAATCCCATCAGGACTGCAATGGACAGACTCTACTCAATTGCGATCGGAGCCCTCATAGCCGTTTTAGTAAATGTCTTTATCTGCCCAATATGGGCANGG                                                                                ]
[+] EMBL CB618457             [ACATCAGCTAGACCAGTGTTATTGATCTCTTCTGTGAAACCCTTAGAGCAATTTCTTAAAAGAGACCGCAAGTTACAGAATGAATGGAAAGAAGGGTAGTATAAGGATTGACATTTGCCTGAAACCAAAAGATGTGGTGCCAGAAGATGCAAAGAAGCCAATCAGTGAAGAAGGGCTTTCCCCAAGGAAATGGCTACATGATGTCTGGGACTTCGCCAGACAGGATACAAACAGGGTCACCTTTGCACTCAAGGTTGGCCTTGCTTGCCTCCTTGTGTCACTGCTCATACTCTTCCGTGCACCCTATGACATCTTTGGGGCTAACATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCAAGTACACTGTTGGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGGAGTATTTGCAGTAGTTGTTATTCAGGTGGCTATGTCTAGTGGCCATATTGCAAAACCATACATCATTGGTTTCAGCATATTTCTCATTGGTGCTGTAACATCATTTATGAAGCTATGGCCATCACTAGTTCCATATGAATATGGTTTTCGAGTTATCCTATTCACATATTGCTTGATCATCGTATCGGGCTACCGCATGGGAAATCCCATCATGACTGCAATGGACAGACTCTACTCAATTGCGATCGGAGCCCTCATAGCCGATTTAGTAAATGTCTTTATCTGC                                                                                               ]


>consensus_6888#0 ACATCAGCTAGACCAGTGTTATTGATCTCTTCTGTGAAACCCTTAGAGCAATTTCTTAAA AGAGACCGCAAGTTAGAGAATGAATGGAAAGAAGGGTAGTATAAGGATTGACATTTGCCT GAAACCAAAAGATGTGGTGCCAGAAGATGCAAAGAAGCCAATCAGTGAAGAAGGGCTTTC CCCAAGGAAATGGCTACATGATGTCTGGGACTTCGCCAGACAGGATACAAACAGGGTCAC CTTTGCACTCAAGGTTGGCCTTGCTTGCCTCCTTGTGTCACTGCTCATACTCTTCCGTGC ACCCTATGACATCTTTGGGGCTAACATCATCTGGTCCATCCTCACTGTTGCTATAATGTT CGAGTACACTGTTGGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATT TGCTGGAGTATTTGCAGTAGTTGTTATTCAGGTGGCTATGTCTAGTGGCCATATTGCAGA ACCATACATCATTGGTTTCAGCATATTTCTCATTGGTGCTGTAACATCATTTATGAAGCT ATGGCCATCACTAGTTCCATATGAATATGGTTTTCGAGTTATCCTATTCACATATTGCTT GATCATCGTATCGGGCTACCGCATGGGAAATCCCATCAGGACTGCAATGGACAGACTCTA CTCAATTGCGATCGGAGCCCTCATAGCCGTTTTAGTAAATGTCTTTATCTGCCCAATATG GGCAGGGGAGCAACTGCACAGGGAGCTAGTTAACAGCTTCAACTCTCTCGCAGACTCCTT AGAAGAGTGTGTCAAGAAGTATCTAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)