These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6895#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 704 fasta sequence [CTTTCTCTTGATCTTAGAAGCAACATACCGAGCTTACAATTTGCACTGACCATACGGAAAATAATCAAAGTTTTTTTTTCACACAGAATTACATTAATAGGGAAGGTCCAGCAAATCTCCATTCGGTAGGCAAGCACACGGCTATATATATTATCCTGAAAAATATGCTTGTCTGGATAAGTTTGATCAGATCGTTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCATGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGGCATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCTG-ACGAGCTGCCTCT-CCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGAGGGAAGCCATTGGCTACTACTGGCTCGTCAGCTCCCAATGGCGGTTTGGAATGATGCTCAAGGAGGAGCTACTTATAGTGAGCTTTTAAGTTGTTTGTTTAGAGGTTTCAGGTAAATCTGGATTTCTTGCAAGGAATTTGCACTGTTCTTGCAAGGATATTTTTGCTGGTGGGTCACAGAAAGGTTGTGACAAGGGTTTGGTTGTTCTGGGGCTCTGCTAGTGTGGACTCTAGGTGAACAGAATCATTAGGCGAATGCTGTAAATCGAAATATCTGCTAGTTCTT] [-] EMBL CA767359 [CTTTCTCTTGATCTTAGAAGCAACATACCGAGCTTACAATTTGCACTGACCATACGGAAAATAATCAAAGTTTTTTTTTCACACAGAATTACATTAATAGGGAAGGTCCAGCAAATCTCCATTCGGTAGGCAAGCACACGGCTATATATATTATCCTGAAAAATATGCTTGTCTGGATAAGTTTGATCAGATCGCTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCATGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGGCATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCTG ACGAG ] [-] EMBL AU032536 [ TTTTTTTCACACAGAATTACATTAATAGGGAAGGTCCAGCAAATCTCCATTCGATAGGCAAGCACACGGCTATATATATTATCCTGAAAAATATGCTTGTCTGGATAAGTTTGATCAGATCGTTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCATGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGGCATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCTGAACGAGCTGCCTCTACCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGAGGGAAGCCATTGGCTACTA ] [+] EMBL AK063327 [ CAGATCGTTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCATGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGGCATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCTG ACGAGCTGCCTCT CCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGAGGGAAGCCATTGGCTACTACTGGCTCGTCAGCTCCCAATGGCGGTTTGGAATGATGCTCAAGGAGGAGCTACTTATAGTGAGCTTTTAAGTTGTTTGTTTAGAGGTTTCAGGTAAATCTGGATTTCTTGCAAGGAATTTGCACTGTTCTTGCAAGGATATTTTTGCTGGTGGGTCACAGAAAGGTTGTGACAAGGGTTTGGTTGTTCTGGGGCTCTGCTAGTGTGGACTCTAGGTGAACAGAATCATTAGGCGAATGCTGTAAATCGAAATATCTGCTAGTTCTT] [-] EMBL OSS10696A [ cnACCGTTCTTCCTCNANATCGTTGTCGGAGAAGAAGCCGNATCGCCGGGGGATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTNCCTCGCGCCGCTG ACGAGCTGCCTCT CCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGANGGAANCCATTGGCTACTAC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||