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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6895 cluster # 6895       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6895#0 length = 704 sequences # 4  

consensusID : consensus_6895#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 704
fasta sequence
                              [CTTTCTCTTGATCTTAGAAGCAACATACCGAGCTTACAATTTGCACTGACCATACGGAAAATAATCAAAGTTTTTTTTTCACACAGAATTACATTAATAGGGAAGGTCCAGCAAATCTCCATTCGGTAGGCAAGCACACGGCTATATATATTATCCTGAAAAATATGCTTGTCTGGATAAGTTTGATCAGATCGTTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCATGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGGCATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCTG-ACGAGCTGCCTCT-CCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGAGGGAAGCCATTGGCTACTACTGGCTCGTCAGCTCCCAATGGCGGTTTGGAATGATGCTCAAGGAGGAGCTACTTATAGTGAGCTTTTAAGTTGTTTGTTTAGAGGTTTCAGGTAAATCTGGATTTCTTGCAAGGAATTTGCACTGTTCTTGCAAGGATATTTTTGCTGGTGGGTCACAGAAAGGTTGTGACAAGGGTTTGGTTGTTCTGGGGCTCTGCTAGTGTGGACTCTAGGTGAACAGAATCATTAGGCGAATGCTGTAAATCGAAATATCTGCTAGTTCTT]

[-] EMBL CA767359             [CTTTCTCTTGATCTTAGAAGCAACATACCGAGCTTACAATTTGCACTGACCATACGGAAAATAATCAAAGTTTTTTTTTCACACAGAATTACATTAATAGGGAAGGTCCAGCAAATCTCCATTCGGTAGGCAAGCACACGGCTATATATATTATCCTGAAAAATATGCTTGTCTGGATAAGTTTGATCAGATCGCTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCATGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGGCATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCTG ACGAG                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL AU032536             [                                                                        TTTTTTTCACACAGAATTACATTAATAGGGAAGGTCCAGCAAATCTCCATTCGATAGGCAAGCACACGGCTATATATATTATCCTGAAAAATATGCTTGTCTGGATAAGTTTGATCAGATCGTTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCATGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGGCATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCTGAACGAGCTGCCTCTACCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGAGGGAAGCCATTGGCTACTA                                                                                                                                                                                                                                                                          ]
[+] EMBL AK063327             [                                                                                                                                                                                           CAGATCGTTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCATGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGGCATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCTG ACGAGCTGCCTCT CCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGAGGGAAGCCATTGGCTACTACTGGCTCGTCAGCTCCCAATGGCGGTTTGGAATGATGCTCAAGGAGGAGCTACTTATAGTGAGCTTTTAAGTTGTTTGTTTAGAGGTTTCAGGTAAATCTGGATTTCTTGCAAGGAATTTGCACTGTTCTTGCAAGGATATTTTTGCTGGTGGGTCACAGAAAGGTTGTGACAAGGGTTTGGTTGTTCTGGGGCTCTGCTAGTGTGGACTCTAGGTGAACAGAATCATTAGGCGAATGCTGTAAATCGAAATATCTGCTAGTTCTT]
[-] EMBL OSS10696A            [                                                                                                                                                                                                                                                         cnACCGTTCTTCCTCNANATCGTTGTCGGAGAAGAAGCCGNATCGCCGGGGGATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTNCCTCGCGCCGCTG ACGAGCTGCCTCT CCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGANGGAANCCATTGGCTACTAC                                                                                                                                                                                                                                                                         ]


>consensus_6895#0 CTTTCTCTTGATCTTAGAAGCAACATACCGAGCTTACAATTTGCACTGACCATACGGAAA ATAATCAAAGTTTTTTTTTCACACAGAATTACATTAATAGGGAAGGTCCAGCAAATCTCC ATTCGGTAGGCAAGCACACGGCTATATATATTATCCTGAAAAATATGCTTGTCTGGATAA GTTTGATCAGATCGTTTGCATCCAAGCTGCCTGGCGATCGACTCCAGGCCACCGCAGGCA TGAGACCAGCCACCGTTCTTCCTCCACATCGTTGTCGGAGAAGAAGCCGCATCGCCGGGG CATCGCCGGATGCTTCGAACAAGACCTCTCCGCCTCCTCCGCCGCCTCCCTCGCGCCGCT GACGAGCTGCCTCTCCTCGACGTCGACGCCGATGACGATTGCTCGCAGCAGCAGCAGGAG GGAAGCCATTGGCTACTACTGGCTCGTCAGCTCCCAATGGCGGTTTGGAATGATGCTCAA GGAGGAGCTACTTATAGTGAGCTTTTAAGTTGTTTGTTTAGAGGTTTCAGGTAAATCTGG ATTTCTTGCAAGGAATTTGCACTGTTCTTGCAAGGATATTTTTGCTGGTGGGTCACAGAA AGGTTGTGACAAGGGTTTGGTTGTTCTGGGGCTCTGCTAGTGTGGACTCTAGGTGAACAG AATCATTAGGCGAATGCTGTAAATCGAAATATCTGCTAGTTCTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)