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Oryza sativa
cluster # 6899 cluster # 6899       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6899#0 length = 1640 sequences # 2  
consensus_6899#1 length = 784 sequences # 1  
consensus_6899#2 length = 473 sequences # 1  

consensusID : consensus_6899#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1640
fasta sequence
                              [GGCCACTCATTCCTCCCTCCCCACCACCACCACCACCACCGGCGGCGGCGCAATGCTGGCAGCGGCGGCGGCGGCTCTCCGGCCAGCGCCCACCACCGCGGCCTTCTCCCCCTCCACCGCGAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCACCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCGTCGGCGTCGGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGTTCGCGGCGGATTGGCAGGCGGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAGCGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAGCCCCGCGCATTGGTGTAAAGACCCCAAAAGGCCCATTCAAGATGTTACAAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGGTATGATTTCTGTTTGTGTGTTTTTTTTTTTTTGGTGTATGGTTTTTTGATGTTGATGTACTACTTTATGTGCCCAGTAGCTCTTCTTGACTAGAGAACAGTTTTGTTAACCAGGAGGGAACCCATGAATAGGTTTTTACGTTGCAATCTCCATGTTTTAATCAGTTCTATTTCTTCACAGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGAGTTTGGAGAACAGCGAGTATGAGGCAGCATGCCTGTACTCCCCCCAATTTTCTGACCAACCGACTATAGTGAAACAACAGCACGAGCAGACAACCTGAAAAGTTCGTCGTTGTTTCCTCATTCTGATGCTGAGCTTCCTCTCAGCTGGAGACTACTTAACCGAAAATTGCAAATTTTGTCAGTAATACAATGAGTAGGTAGTTATCTTCGTGCATGCATGTACCTATCTGAAACCTCAAGGCCACCTGTATATATATCAGTATTCAT]

[+] EMBL AK100284             [GGCCACTCATTCCTCCCTCCCCACCACCACCACCACCACCGGCGGCGGCGCAATGCTGGCAGCGGCGGCGGCGGCTCTCCGGCCAGCGCCCACCACCGCGGCCTTCTCCCCCTCCACCGCGAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCACCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCGTCGGCGTCGGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGTTCGCGGCGGATTGGCAGGCGGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAGCGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAGCCCCGCGCATTGGTGTAAAGACCCCAAAAGGCCCATTCAAGATGTTACAAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGGTATGATTTCTGTTTGTGTGTTTTTTTTTTTTTGGTGTATGGTTTTTTGATGTTGATGTACTACTTTATGTGCCCAGTAGCTCTTCTTGACTAGAGAACAGTTTTGTTAACCAGGAGGGAACCCATGAATAGGTTTTTACGTTGCAATCTCCATGTTTTAATCAGTTCTATTTCTTCACAGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGAGTTTGGAGAACAGCGAGTATGAGGCAGCATGCCTGTACTCCCCCCAATTTTCTGACCAACCGACTATAGTGAAACAACAGCACGAGCAGACAACCTGAAAAGTTCGTCGTTGTTTCCTCATTCTGATGCTGAGCTTCCTCTCAGCTGGAGACTACTTAACCGAAAATTGCAAATTTTGTCAGTAATACAATGAGTAGGTAGTTATCTTCGTGCATGCATGTACCTATCTGAAACCTCAAGGCCACCTGTATATATATCAGTATTCAT]
[+] EMBL CB618539             [                                                                                                              CCTCCACCGCGAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCACCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCGTCGGCGTCGGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGTTCGCGGCGGATTGGCAGGCGGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAGCGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAGCCCCGCGCATTGGTGTAAAGACCCTAAAAGGCCCATTCAAGATGTTACGAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_6899#0 GGCCACTCATTCCTCCCTCCCCACCACCACCACCACCACCGGCGGCGGCGCAATGCTGGC AGCGGCGGCGGCGGCTCTCCGGCCAGCGCCCACCACCGCGGCCTTCTCCCCCTCCACCGC GAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCA CCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCGTCGGCGTC GGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGTTCGCGGCGGATTGGCAGGC GGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAG CGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAG CCCCGCGCATTGGTGTAAAGACCCCAAAAGGCCCATTCAAGATGTTACAAAGGACCTTGT GGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTT CTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTA TGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGA TGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCA AGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGA TATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGA GACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCACCTAGTGCTGGGATCATATC ATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGA ACTATTGCAAGAGGATGGGTATGATTTCTGTTTGTGTGTTTTTTTTTTTTTGGTGTATGG TTTTTTGATGTTGATGTACTACTTTATGTGCCCAGTAGCTCTTCTTGACTAGAGAACAGT TTTGTTAACCAGGAGGGAACCCATGAATAGGTTTTTACGTTGCAATCTCCATGTTTTAAT CAGTTCTATTTCTTCACAGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAAC GTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTGCCAGCTAAGGACAATCAGT TCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTATATTTGACAACCAGCCTAG ACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGAGTTTGGA GAACAGCGAGTATGAGGCAGCATGCCTGTACTCCCCCCAATTTTCTGACCAACCGACTAT AGTGAAACAACAGCACGAGCAGACAACCTGAAAAGTTCGTCGTTGTTTCCTCATTCTGAT GCTGAGCTTCCTCTCAGCTGGAGACTACTTAACCGAAAATTGCAAATTTTGTCAGTAATA CAATGAGTAGGTAGTTATCTTCGTGCATGCATGTACCTATCTGAAACCTCAAGGCCACCT GTATATATATCAGTATTCAT



consensusID : consensus_6899#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 784
fasta sequence
                              [ATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGAGTTTGGAGAACAGCGAGTATGAGGCAGCATGCCTGTACTCCCCCCAATTTTCTGACCAACCGACTATAGTGAAACAACAGCACGAGCAGACAACCTGAAAAGTTCGTCGTTGTTTCCTCATTCTGATGCTGAGCTTCCTCTCAGCTGGAGACTACTTAACCGAAAATTGCAAATTTTGTCAGTAATACAATGAGTAGGTAGTTATCTTCGTGCATGCATGTACCTATCTGAAACCTCAAGGCCACCTGTATATATATCAGTATTCATCTTCAGTGTCATCAATTCATCATATCTTGTTCTGGTAACTAATAGCTAGATATGCC]

[-] EMBL CB618540             [ATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGAGTTTGGAGAACAGCGAGTATGAGGCAGCATGCCTGTACTCCCCCCAATTTTCTGACCAACCGACTATAGTGAAACAACAGCACGAGCAGACAACCTGAAAAGTTCGTCGTTGTTTCCTCATTCTGATGCTGAGCTTCCTCTCAGCTGGAGACTACTTAACCGAAAATTGCAAATTTTGTCAGTAATACAATGAGTAGGTAGTTATCTTCGTGCATGCATGTACCTATCTGAAACCTCAAGGCCACCTGTATATATATCAGTATTCATCTTCAGTGTCATCAATTCATCATATCTTGTTCTGGTAACTAATAGCTAGATATGCC]


>consensus_6899#1 ATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGT CAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACA AAGTTATTCCTTTGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCAT CTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAG AGGATGGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCAC AAGATCTGGAACTCTGGCTTTCCAGTGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTG CTCGAGCTGGGCGACAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCA TAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGAGTTTGGAGAACAGCGAGTA TGAGGCAGCATGCCTGTACTCCCCCCAATTTTCTGACCAACCGACTATAGTGAAACAACA GCACGAGCAGACAACCTGAAAAGTTCGTCGTTGTTTCCTCATTCTGATGCTGAGCTTCCT CTCAGCTGGAGACTACTTAACCGAAAATTGCAAATTTTGTCAGTAATACAATGAGTAGGT AGTTATCTTCGTGCATGCATGTACCTATCTGAAACCTCAAGGCCACCTGTATATATATCA GTATTCATCTTCAGTGTCATCAATTCATCATATCTTGTTCTGGTAACTAATAGCTAGATA TGCC



consensusID : consensus_6899#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 473
fasta sequence
                              [CCCCGCGCATTGGTGTAAAGACCCTAAAAGGCCCATTCAAGATGTTACGAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTNNNNNAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCANTCANNNNNNNCTNGGA]

[+] EMBL CF197243             [CCCCGCGCATTGGTGTAAAGACCCTAAAAGGCCCATTCAAGATGTTACGAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTNNNNNAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCANTCANNNNNNNCTNGGA]


>consensus_6899#2 CCCCGCGCATTGGTGTAAAGACCCTAAAAGGCCCATTCAAGATGTTACGAAGGACCTTGT GGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTT CTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTA TGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGA TGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCA AGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGA TATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTNNNNNAAGATCCTCTACTGGA GACATTGGACAAAGTTATTCCTTTGGAGGCTGATCANTCANNNNNNNCTNGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6899#0      GGCCACTCATTCCTCCCTCCCCACCACCACCACCACCACCGGCGGCGGCGCAATGCTGGC 60
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      AGCGGCGGCGGCGGCTCTCCGGCCAGCGCCCACCACCGCGGCCTTCTCCCCCTCCACCGC 120
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      GAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCA 180
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      -------------------------------ATTTTTTAAATGAAGGTGATACTGTCAAG 29
                                                                                  

consensus_6899#0      CCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCGTCGGCGTC 240
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      GTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTG 89
                                                                                  

consensus_6899#0      GGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGTTCGCGGCGGATTGGCAGGC 300
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      GAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCA 149
                                                                                  

consensus_6899#0      GGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAG 360
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      CCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGA 209
                                                                                  

consensus_6899#0      CGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAG 420
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      CTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGTATAACAGACGTACAGTTTGGG 269
                                                                                  

consensus_6899#0      CCCCGCGCATTGGTGTAAAG----ACCCCAAAAGGCCC--ATTCAAGATGTTACAAAGGA 474
consensus_6899#2      CCCCGCGCATTGGTGTAAAG----ACCCTAAAAGGCCC--ATTCAAGATGTTACGAAGGA 54
consensus_6899#1      CGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTG 329
                      * *** ******* * ** *         * ***  *   *     *   ** *   *  

consensus_6899#0      CCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCT 534
consensus_6899#2      CCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCT 114
consensus_6899#1      CCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTA 389
                      **   *  *  *   ** ***   *    ** ****  **  ***       * ***   

consensus_6899#0      TGTCTTCTCAG-AGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTG 593
consensus_6899#2      TGTCTTCTCAG-AGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTG 173
consensus_6899#1      TATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAG-G 448
                      * * *    *  **       ** *  **   *   *      *  **  *  * * * *

consensus_6899#0      CTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGC-GA 652
consensus_6899#2      CTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGC-GA 232
consensus_6899#1      ACGTGTTCCTTGAGTTTGGAGAACAGCGAGTATGAGGCAGCATGCCTGTACTCCCCCCAA 508
                         * *    **   ***  *         *      * *      *** *  *  *  *

consensus_6899#0      TTTCCTGATGGA--AATTATCATC---TTACTGGCCTTGTACATATCTCTGAGGTCTCTT 707
consensus_6899#2      TTTCCTGATGGA--AATTATCATC---TTACTGGCCTTGTACATATCTCTGAGGTCTCTT 287
consensus_6899#1      TTTTCTGACCAACCGACTATAGTGAAACAACAGCACGAGCAGACAACCTGAAAAGTTCGT 568
                      *** ****   *   * ***  *      ** *  *  * * * * *    *    ** *

consensus_6899#0      GGGATCTTGTCCAAGATGT--CCGGGATT--TTTTAAATGAAGGTGATACTGTC-AAGGT 762
consensus_6899#2      GGGATCTTGTCCAAGATGT--CCGGGATT--TTTTAAATGAAGGTGATACTGTC-AAGGT 342
consensus_6899#1      CGTTGTTTCCTCATTCTGATGCTGAGCTTCCTCTCAGCTGGAGACTACTTAACCGAAAAT 628
                       *    **   **   **   * * * **  * * *  ** **   *      * **  *

consensus_6899#0      CATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAAT-CAGACAATTGG 821
consensus_6899#2      CATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAAT-CAGACAATTNN 401
consensus_6899#1      TGCAAATTTTGTCAGTAATACAATGAGTAGGTAGTTATCTTCGTGCATGCATGTACCTAT 688
                         *    *   ** * ***    **       * ** ***  *  ** **   *  *  

consensus_6899#0      AGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCAC 881
consensus_6899#2      NNNAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCANTCAN 461
consensus_6899#1      CTGAAACCTCAAGGCCACCTGTAT-ATATATCAGTATTCATCTTCAGTGTCATCAATTCA 747
                         **    *    *       **   * *    ***** * *  **  * **** *   

consensus_6899#0      CTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGAC 941
consensus_6899#2      NNNNNNCTNGGA------------------------------------------------ 473
consensus_6899#1      TCATATCTTGTTCTGGTAACTAATAGCTAGATATGCC----------------------- 784
                            ** *                                                  

consensus_6899#0      TTGATGGTATATGTAATGAACTATTGCAAGAGGATGGGTATGATTTCTGTTTGTGTGTTT 1001
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      TTTTTTTTTTGGTGTATGGTTTTTTGATGTTGATGTACTACTTTATGTGCCCAGTAGCTC 1061
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      TTCTTGACTAGAGAACAGTTTTGTTAACCAGGAGGGAACCCATGAATAGGTTTTTACGTT 1121
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      GCAATCTCCATGTTTTAATCAGTTCTATTTCTTCACAGTATAACAGACGTACAGTTTGGG 1181
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      CGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTG 1241
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      CCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTA 1301
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      TATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGA 1361
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      CGTGTTCCTTGAGTTTGGAGAACAGCGAGTATGAGGCAGCATGCCTGTACTCCCCCCAAT 1421
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      TTTCTGACCAACCGACTATAGTGAAACAACAGCACGAGCAGACAACCTGAAAAGTTCGTC 1481
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      GTTGTTTCCTCATTCTGATGCTGAGCTTCCTCTCAGCTGGAGACTACTTAACCGAAAATT 1541
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      GCAAATTTTGTCAGTAATACAATGAGTAGGTAGTTATCTTCGTGCATGCATGTACCTATC 1601
consensus_6899#2      ------------------------------------------------------------
consensus_6899#1      ------------------------------------------------------------
                                                                                  

consensus_6899#0      TGAAACCTCAAGGCCACCTGTATATATATCAGTATTCAT 1640
consensus_6899#2      ---------------------------------------
consensus_6899#1      ---------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)