These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6905#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1645 fasta sequence [CCCCCATCCCCACCCCACCCGCTTCACTCTCCCCATCGACCAAACCGCCACCGCCACCGCCACCATGCTCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGTCGTGCTCACCACCACCAGCGGCCGCGCGCCCCTCCTCCACCTCCCCAGGACGCCACGCCCTACTACCGCCGCAAGGATCGCCGCCGCGCCCGACTCCTCCAGAGCCAGAGCCGGTGGCGCGCCTCTCCTCCTCGGCTCCGCCGTTCCCCGGCGGCGTGGCTGGGCGCTGGTATGCCGGGACTCCTCCCTCCCTGGCCCACCTGGAGTGGACCCCGTGGCGGAGGAGGAAGAGAACAGGAAGAAGACCGAGGCGGTGGCGGCCGCCGCGGCGGCCCGGATTGCCAGTAGCGGCGGCGGCGGCGGAGGAGGAGGAGGGAGTCTCAGCGACTGGACGACGTCGGTGCTTATCTTCGGAATCTGGGCGGGGCTCATGTACTACATCTTCCAACTCGCGCCCAACCAGACGCCGTACAGAGACACATACTTCTTGCAAAAGCTTTGTAACCTGAAAGGCGACGATGGCTTCCGAATGAATGATGTTCTTGTGCCTCTATGGTACATAATGGGCCTCTGGCCACTAGTGTACAGCATGCTGCTTCTTCCTACTGGCAGAAGTTCAAAAAGCAAGATTCCTGTCTGGCCATTCCTAATTCTTTCATGCATTGGGGGAGCATATGCCCTGATTCCCTACTTTGTTCTATGGAAGCCTCCTCCACCTCCGATTGATGA-GGAA-GAAATTGGACAAT-GGCCACTGAAGTTTCTTGAGTCAAAATTGACTGCAGGAGTAACGTTTGCTGTGGGCCTTGGGCTGATTGTCTATGCAGCCAAAGCTGGTGGTGAAGATTGGCAGGAATTCATTCGATACTTTCGGGAAAGCAAGTTGATACATATCACCTGCCTTGATTTCTGTTTGCTCTCGGCCTTCTCACCATTTTGGGTCTACAACGACTTGACAGCAAGGCGATGGAAAAATGGCTCTTGGCTTCTGCCCTTGGCACTTATCCCTTTTGTGGGACCTTCATTGTATCTTTTGCTGAGGCCATCACTCTCTTCTCTGCTAGCAGCAACAGGTCCATCAGATGAT-AAAACACAGTAATAACAATTATGAAGCTGAGTATT-GATGAGGTTTTGGTTACGAGGAGATGACATGGTAGAAAGGTTAAGAACCACTTATGGAAATTGGATTGGACAGATTTAGATGCCAATCTGGGGCATTCCACAAAGTTGACTTGTTAGTAATGCATTTGAATGGCAAAAGTATGAATAATGTCCTTACTCAGCATGGTCAGCATCTGAATTCGTCAGAAAATTTTCAACTTGGAAGGCATTGGAGTAATCAGCAATGCTTAAATCCCTGGTGAACATTCTGCATTCTCCCCAGCGTACATATACAACTGGTAGGACCTTTTGCTACTGTTGTCCATGTATAGAAAATTTTGACCTTGTGACAGTGGTCCATATGTAAGAAGCCATGGTGCTAGTACATGATCATGAATGATAGGCTACAAATTTATTGTTACAGCCAAAGAATAACAGGATTCTTTTGGCACCAACTACACTTAGAATTACATTGCAACAGGTGTTTACTGCTCAAAAAAAAAAA] [+] EMBL AK065348 [CCCCCATCCCCACCCCACCCGCTTCACTCTCCCCATCGACCAAACCGCCACCGCCACCGCCACCATGCTCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGTCGTGCTCACCACCACCAGCGGCCGCGCGCCCCTCCTCCACCTCCCCAGGACGCCACGCCCTACTACCGCCGCAAGGATCGCCGCCGCGCCCGACTCCTCCAGAGCCAGAGCCGGTGGCGCGCCTCTCCTCCTCGGCTCCGCCGTTCCCCGGCGGCGTGGCTGGGCGCTGGTATGCCGGGACTCCTCCCTCCCTGGCCCACCTGGAGTGGACCCCGTGGCGGAGGAGGAAGAGAACAGGAAGAAGACCGAGGCGGTGGCGGCCGCCGCGGCGGCCCGGATTGCCAGTAGCGGCGGCGGCGGCGGAGGAGGAGGAGGGAGTCTCAGCGACTGGACGACGTCGGTGCTTATCTTCGGAATCTGGGCGGGGCTCATGTACTACATCTTCCAACTCGCGCCCAACCAGACGCCGTACAGAGACACATACTTCTTGCAAAAGCTTTGTAACCTGAAAGGCGACGATGGCTTCCGAATGAATGATGTTCTTGTGCCTCTATGGTACATAATGGGCCTCTGGCCACTAGTGTACAGCATGCTGCTTCTTCCTACTGGCAGAAGTTCAAAAAGCAAGATTCCTGTCTGGCCATTCCTAATTCTTTCATGCATTGGGGGAGCATATGCCCTGATTCCCTACTTTGTTCTATGGAAGCCTCCTCCACCTCCGATTGATGA GGAA GAAATTGGACAAT GGCCACTGAAGTTTCTTGAGTCAAAATTGACTGCAGGAGTAACGTTTGCTGTGGGCCTTGGGCTGATTGTCTATGCAGCCAAAGCTGGTGGTGAAGATTGGCAGGAATTCATTCGATACTTTCGGGAAAGCAAGTTGATACATATCACCTGCCTTGATTTCTGTTTGCTCTCGGCCTTTTCACCATTTTGGGTCTACAACGACTTGACAGCAAGGCGATGGAAAAATGGCTCTTGGCTTCTGCCCTTGGCACTTATCCCTTTTGTGGGACCTTCATTGTATCTTTTGCTGAGGCCATCACTCTCTTCTCTGCTAGCAGCAACAGGTCCATCAGATGAT AAAACACAGTAATAACAATTATGAAGCTGAGTATT GATGAGGTTTTGGTTACGAGGAGATGACATGGTAGAAAGGTTAAGAACCACTTATGGAAATTGGATTGGACAGATTTAGATGCCAATCTGGGGCATTCCACAAAGTTGACTTGTTAGTAATGCATTTGAATGGCAAAAGTATGAATAATGTCCTTACTCAGCATGGTCAGCATCTGAATTCGTCAGAAAATTTTCAACTTGGAAGGCATTGGAGTAATCAGCAATGCTTAAATCCCTGGTGAACATTCTGCATTCTCCCCAGCGTACATATACAACTGGTAGGACCTTTTGCTACTGTTGTCCATGTATAGAAAATTTTGACCTTGTGACAGTGGTCCATATGTAAGAAGCCATGGTGCTAGTACATGATCATGAATGATAGGCTACAAATTTATTGTTACAGCCAAAGAATAACAGGATTCTTTTGGCACCAACTACACTTAGAATTACATTGCAACAGGTGT ] [+] EMBL CA767319 [ GAGGGAGTCTCAGCGACTGGACGACGTCGGTGCTTATCTTCGGAATCTGGGCGGGGCTCATGTACTACATCTTCCAACTCGCGCCCAACCAGACGCCGTACAGAGACACATACTTCTTGCAAAAGCTTTGTAATCTGAAAGGCGACGATGGCTTCCGAATGAATGATGTTCTTGTGCCTCTATGGTACATAATGGGCCTCTGGCCACTAGTGTACAGCATGCTGCTTCTTCCTACTGGCAGAAGTTCAAAAAGCAAGATTCCTGTCTGGCCATTCCTAATTCTTTCATGCATTGGGGGAGCATATGCCCTGATTCCCTACTTTGTTCTATGGAAGCCTCCTCCACCTCCGATTGATGA GGAA GAAATTGGACAAT GGCCACTGAAGTTTCTTGAGTCAAAATTGACTGCAGGAGTAACGTTTGCTGTGGGCCTTGGGCTGATTGTCTATGCAGCCAAAGCTGGTGGTGAAGATTGGCAGGAATTCATTCGATACTTTCGGGAAAGCAAGTTGATACATATCACCTGCCTTGATTTCTGTTTGCTCTCGGCCTTCTCACCATTTTGGGTCTACAACGACTTGACAGCAAGGCGATGGAAAAATGGCTCTTGGCTTCTGCCCTTGGCACTTATCCCTTTTGTGGGACCTTCATTGTATCTTTTGCTGAGGCCATCACTCTCTTCTCTGCTAGCAGCAACAGGTCCATCAGATGATAAAAACACAGTAATAACAATTATGAAGCTGAGTATTGGATGAG ] [+] EMBL OSS13784A [ AGTCTCAGCGACTGGACGACGTCGGTGCTTATCTTCGGAATCTGGGCGGGGCTCATGTACTACATCTTCCAACTCGCGCCCAACCAGACGCCGTACAGAGACACATACTTCTTGCAAAAGCTTTGTAACCTGAAAGGCGACGATGGCTTCCGAATGAATGATGTTCTTGTGCCTCTATGGTACATAATGGGCCTCTGG CACTAGTGTACAGCATGCTGCTTCTTCCTACTGGCAGAAGTTCAAAAAGCAAGATTCCTGTCTGGCCATTCCTAATTCTTTCATGCATTGGGGGAGCATATGCCCTGATTNCCTACTTTGNTCTATGGAAGGCTCCTNCACCTCCGATTGATGAGGGAAGGAATTTGGNCAATGGGCCACT ] [+] EMBL AU032711 [ CTCTCGGCCTTCTCACCATTTTGGGTCTACAACGACTNGACAGCAAGGCGATGGAAAAATGGCTCTTGGCTTCTGCCCTTGGCACTTATCCCTTTTGTGGGNCCTTCATTGTATCTTTTGCTGAGGCCATCACTCTCTTCTCTGCTNGCAGCAACAGGTCCATCAGATGAT AAAACACAGTAATTACAATTATGAAGCTGAGTATT GATGAGGTTTTGGTTACGAGGAGATGACATGGTAGAAAGGTTAAGAACCACTTATGGAAATTGGATTGGACAGATTTAGATGCCAATCTGGAGCATTCCACAAAGTTGACTTGTTAGTAATGCATTTGAATGGCAAAAGTATGAATAATGTCCTTACTCAGCATGGTCAGCATCTGAATTCGTCAGAAAATTTTCAACTTGGAAGGCATTGGAGTAATCAGCAATGCTTAAATCCCTGGTGAACATTCTGCATTCTCCCCAGCGTACATATACAACTGGTAGGACCTTTTGCTACTGTTGTCCATGTATAGAAAATTTTGACCTTGTGACAGTGGTCCATATGTAAGAAGCCATGGTGCTAGTACATGATCATGAATGATAGGCTACAAATTTATTGTTACAGCCAAAGAATAACAGGATTCTTTTGGCACCAACTACACTTAGAATTACATTGCAACAGGTGTTTACTGCTCAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||