cluster # 6924

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Oryza sativa
cluster # 6924 cluster # 6924 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6924#0 length = 668 sequences # 4

consensusID : consensus_6924#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 668
fasta sequence

                              [CCAAACAACGGGGCACGCACGCCTTTGGCAGCAGGGAGCGGCGGCAGAGGAAGGGGGGAAGGGAGCAAGCAAGGCAAGGGATTCCGCCTCGCGAGAACGATGGGGTTCATGCTGCGGGTGAGGCTGGCCTCCTTCTTCGCCGGCGCCGCCGCCGCCGGGGCCGCCGGCGGCT-TCTTCCTCTACAAGGACTACAAGCTCGCCCACGACTCCATGGCCCTCCAGGTCAAAGGCCTACAAGACCATGTGGATGCCCGTTACAAAGCTCTTGACAAACGACTT-GCT-ACATT-GGAA-GA-CCAGAAAA--CCAG-CGAG-ACT-GCT--CCAGACGTGGGCGTGCCAT-CTGATTA-GTCTGTTCATTGGCTGGC-TTGAGTATGGATGATTTACGACTGTTTACTTTAACCTGTGTTATCGTCTCTTGGAGGCAAAAGCCGATGACTGACTGCAAAATAATTTAGTGAAGAG--TTTTTTTTTTGTGTGTG-GCAATGAAGCTTCTGT-AGTGTTATAGATGCCCATGGGGATACCCAACCTTGCAAAACCATTTCACTTTTGATGGCACTGAACCTTGGCAGTCAAGCTCGATCATTTACCAATGTACCTGTGTGAAAGTTTCTTTACCTGTTTGCTGCCAGGAACTTGGATGTTTTAAGATGCCTGCTGTTATTCTTTTTCAAAAA]

[+] EMBL AK062545             [CCAAACAACGGGGCACGCACGCCTTTGGCAGCAGGGAGCGGCGGCAGAGGAAGGGGGGAAGGGAGCAAGCAAGGCAAGGGATTCCGCCTCGCGAGAACGATGGGGTTCATGCTGCGGGTGAGGCTGGCCTCCTTCTTCGCCGGCGCCGCCGCCGCCGGGGCCGCCGGCGGCT TCTTCCTCTACAAGGACTACAAGCTCGCCCACGACTCCATGGCCCTCCAGGTCAAAGGCCTACAAGACCATGTGGATGCCCGTTACAAAGCTCTTGACAAACGACTT GCT ACATT GGAA GA CCAGAAAA  CCAG CGAG ACT GCT  CCAGACGTGGGCGTGCCAT CTGATTA GTCTGTTCATTGGCTGGC TTGAGTATGGATGATTTACGACTGTTTACTTTAACCTGTGTTATCGTCTCTTGGAGGCAAAAGCCGATGACTGACTGCAAAATAATTTAGTGAAGAG  TTTTTTTTTTGTGTGTG GCAATGAAGCTTCTGT AGTGTTATAGATGCCCATGGGGATACCCAACCTTGCAAAACCATTTCACTTTTGATGGCACTGAACCTTGGCAGTCAAGCTCG                                                                                                ]
[+] EMBL OSC0871              [                                                       GGGAAGGGAGCAAGCAAGGCAAGGGATTCCGCCTCGCGAGAACGATGGGGTTCATGCTGCGGGTGAGGCTGGCCTCCTTCTTCGCCGGCGCCGCC CCGCCGGGGCCGCCG  GGCTNTCTTCCTCTACAAGGACTACAAGCTCGNCCACGACTCCATGGCCCTCCAGGTCAAAGGCCTACAAGACCATGTGGATGCCCGTTACAAAGCTCTTGACAAACGACTT GCT ACATT GGAA GA CCAGAAAA  CCAG CGAG ACT GCT  CCAGACGTGGGCGTGCCAT CTGATTA GTCTGTTCATTGGCTGGC TTGAGTATGGATGATTTACGACTGTTTACTTTAACCTGTGTTATCGTCTCTTGGAGGCAAAAGCCGATGACTGACTGCAAAATAATTTAGTGAAGAG  TTTTTTTTTTTTGTGTGTGGAATTAAGCTTCTGTAAGTGTT                                                                                                                                                                             ]
[+] EMBL AK061590             [                                                           AGGGAGCAAGCAAGGCAAGGGATTCCGCCTCGCGAGAACGATGGGGTTCATGCTGCGGGTGAGGCTGGCCTCCTTCTTCGCCGGCGCCGCCGCCGCCGGGGCCGCCGGCGGCT TCTTCCTCTACAAGGACTACAAGCTCGCCCACGACTCCATGGCCCTCCAGGTCAAAGGCCTACAAGACCATGTGGATGCCCGTTACAAAGCTCTTGACAAACGACTT GCT ACATT GGAA GA CCAGAAAA  CCAG CGAG ACT GCT  CCAGACGTGGGCGTGCCAT CTGATTA GTCTGTTCATTGGCTGGC TTGAGTATGGATGATTTACGACTGTTTACTTTAACCTGTGTTATCGTCTCTTGGAGGCATAAGCCGATGACTGACTGCAAAATAATTTAGTGAAGAG   TTTTTTTTTGTGTGTG GCAATGAAGCTTCTGT AGTGTTATAGATGCCCATGGGGATACCCAACCTTGCAAAACCATTTCACTTTTGATGGCACTGAACCTTGGCAGTC                                                                                                       ]
[+] EMBL AU102019             [                                                                                                                                                                                                                                                                                  CGACTTNGCTAACATTGGGAAGGACCCAGAAAAACCCAGTCGAGNACTGGCTTCCCAGACGTGGGCGTGCCATCCTGATTAGGTCTGTTCANTGGCTGGCTTTGAGTATGGATGATTTACGACTGTTTACTTTAACCTGTGTTATCGTCTCTTGGAGGCAAAAGCCGATGACTGACTGCAAAATAATTTAGTGAAGAGTTTTTTTTTTTTGTGTGTG GCAATGAAGCTTCTGT AGTGTTATAGATGCCCATGGGGATACCCAACCTTGCAAAACCATTTCACTTTTGATGGCACTGAACCTTGGCAGTCAAGCTCGATCATTTACCAATGTACCTGTGTGAAAGTTTCTTTACCTGTTTGCTGCCAGGAACTTGGATGTTTTAAGATGCCTGCTGTTATTCTTTTTCAAAAA]




>consensus_6924#0
CCAAACAACGGGGCACGCACGCCTTTGGCAGCAGGGAGCGGCGGCAGAGGAAGGGGGGAA
GGGAGCAAGCAAGGCAAGGGATTCCGCCTCGCGAGAACGATGGGGTTCATGCTGCGGGTG
AGGCTGGCCTCCTTCTTCGCCGGCGCCGCCGCCGCCGGGGCCGCCGGCGGCTTCTTCCTC
TACAAGGACTACAAGCTCGCCCACGACTCCATGGCCCTCCAGGTCAAAGGCCTACAAGAC
CATGTGGATGCCCGTTACAAAGCTCTTGACAAACGACTTGCTACATTGGAAGACCAGAAA
ACCAGCGAGACTGCTCCAGACGTGGGCGTGCCATCTGATTAGTCTGTTCATTGGCTGGCT
TGAGTATGGATGATTTACGACTGTTTACTTTAACCTGTGTTATCGTCTCTTGGAGGCAAA
AGCCGATGACTGACTGCAAAATAATTTAGTGAAGAGTTTTTTTTTTGTGTGTGGCAATGA
AGCTTCTGTAGTGTTATAGATGCCCATGGGGATACCCAACCTTGCAAAACCATTTCACTT
TTGATGGCACTGAACCTTGGCAGTCAAGCTCGATCATTTACCAATGTACCTGTGTGAAAG
TTTCTTTACCTGTTTGCTGCCAGGAACTTGGATGTTTTAAGATGCCTGCTGTTATTCTTT
TTCAAAAA

clustalw multiple alignements is not computed in this case