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Oryza sativa
cluster # 6935 cluster # 6935       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6935#0 length = 2045 sequences # 3  
consensus_6935#1 length = 1508 sequences # 1  

consensusID : consensus_6935#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2045
fasta sequence
                              [AGAACACAAACCCAATCCAGAGGAGGGAGGAGCGCCGCCGCCGCCGCCGCCGCTCAGGCGAG-AGGTTGCCGGAGCCGCCGCCACCGATGCTGCGCGTGGTCTCCACCCTCCCCGCGCTCCGCCCGCTCCTCGCCGGGAGCACGCTCCTCCTGAACGCTAGACCTCTGCTCCGCTCCCGCCTGACTCGGCGGCCGTTTCGCGCCGTCTCGTCCTCCACGGCGTCCCCGTCGAGCTCCAGCTCCGGCGCCAGGGACTTCGGGGGTGTGGATTTCGGCGATGAGCGCCTTCTGCGGTGCGCGGCGGCGGGGAGAGCGCCGCTGCGGGTGGCGGTGCTGGTGAGCGGCGGGGTGGACAGCAGCGTCGCGCTCCGCCTCCTCCACGCCGCCGGCCACCGCTGCACCGCTTTCTACCTCAAAATCTGGTTCCAGGAAGATTTCAGGAACTTTTGGTCTGAATGCCCGTGGGACGACGATTTGAAGTACGCGCAAGCTGTGTGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTATCTGATGAGTATTGGAACCATGTGGTATCTCACATAATTAACGAGTATCGCAGTGGCCGTACTCCGAACCCTGATGTTCTTTGCAACACAAGAATAAAGTTTGGAGCTTTCTTAGAAGCTATTGAAAATTTGGGATTTGATTACATAGCATCTGGACATTATGCACATGTAGTTCATCCATCACCTGACGATGTTGAAGGGCCATCAGTCCTCCAACTTTCAAAAGACAAGGTGAAGGATCAAACTTATTTCCTTTCACATCTATCTCAGACCCAGCTTAGAAGGCTTCTTTTTCCACTGGGATGTATAACAAAGGATGAAGTGCGCAGGCTGGCTGCTCAGATGGACTTGCCTAACCAAGATAGAAAGGATTCCCAGGGGATATGTTTTCTTGGCAAGGTCAAATTTAGTGAGTTTGTTGAAAGACAGATAGGAGAGATGGAAGGAGTACTGTTGGAAGCTGAAACTGGAGACTACCTAGGGACACACCGTGGATTTTGGTTTTATACAATTGGTCAGCGACAAGGATTGCGCCTTCCTGGCGGACCCTGGTATGTGGTTGAGAAAGGTGTTCAAAACAATGTGGTTTTTGTCTCAAGGAATTACTACTCGCTGGATAAGAGAAGGCGGACATTTCGTGTTGGATCGCTGAACTGGTTTAGCAATTCTGGACCAACAAACAATGAGCAACTTAAATGCAAGGTACGTCATAGTCCTGAATTTCATGATTGCACCGTGACACAAGAGCAAACATCAGAACATGGAGTTATTTTGGTGGTGCGTCTGTCTGAAGATGATCAAGGTTTAGCAGCTGGTCAGTTTGCGGCCTTCTACCGTGACAATTTATGCCTTGGGTCAGGCATAATTCTGGATTCTTGGGACGAAATGAATTTTCCAGTCTGTGCAAGGGCTTTAGAAATTGCTAGAATGGAGGATAAGTCCAGACTGGGGAAGCCAGTAAAGATAATGAACTTAGAACATATCGTGAAATCAGAAAAGGAGGCTATTGAAGTGGCATGATAGGCACAGTCCCTGCAGCCTTCTCTTGAGTCTTGACTACTCCGTACATTCGTGGTTCTGCAAAGTTGCACGTTAACCCTGCAAAAGCAAGAATCGTGTTGTCCCCAGGAACTCCAGCTGGTTCTTCAAAGGAGGTATGGTTGGCGAGCTTGCATTTCTGAAGAGGGTTCTCTGGATAAAAGAGGCGGATGAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTAAGCTGCCGATCTGGCAGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGCGTCTAGAACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTATCAGGAGATGCTCCTTTCATGCTACTACTAGTACCGGTTTTATTTACGTTGTACAAATGTTAAGGTTATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTCTGATCATATGTTTTATCAAAAAAAA]

[+] EMBL AK103276             [AGAACACAAACCCAATCCAGAGGAGGGAGGAGCGCCGCCGCCGCCGCCGCCGCTCAGGCGAG AGGTTGCCGGAGCCGCCGCCACCGATGCTGCGCGTGGTCTCCACCCTCCCCGCGCTCCGCCCGCTCCTCGCCGGGAGCACGCTCCTCCTGAACGCTAGACCTCTGCTCCGCTCCCGCCTGACTCGGCGGCCGTTTCGCGCCGTCTCGTCCTCCACGGCGTCCCCGTCGAGCTCCAGCTCCGGCGCCAGGGACTTCGGGGGTGTGGATTTCGGCGATGAGCGCCTTCTGCGGTGCGCGGCGGCGGGGAGAGCGCCGCTGCGGGTGGCGGTGCTGGTGAGCGGCGGGGTGGACAGCAGCGTCGCGCTCCGCCTCCTCCACGCCGCCGGCCACCGCTGCACCGCTTTCTACCTCAAAATCTGGTTCCAGGAAGATTTCAGGAACTTTTGGTCTGAATGCCCGTGGGACGACGATTTGAAGTACGCGCAAGCTGTGTGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTATCTGATGAGTATTGGAACCATGTGGTATCTCACATAATTAACGAGTATCGCAGTGGCCGTACTCCGAACCCTGATGTTCTTTGCAACACAAGAATAAAGTTTGGAGCTTTCTTAGAAGCTATTGAAAATTTGGGATTTGATTACATAGCATCTGGACATTATGCACATGTAGTTCATCCATCACCTGACGATGTTGAAGGGCCATCAGTCCTCCAACTTTCAAAAGACAAGGTGAAGGATCAAACTTATTTCCTTTCACATCTATCTCAGACCCAGCTTAGAAGGCTTCTTTTTCCACTGGGATGTATAACAAAGGATGAAGTGCGCAGGCTGGCTGCTCAGATGGACTTGCCTAACCAAGATAGAAAGGATTCCCAGGGGATATGTTTTCTTGGCAAGGTCAAATTTAGTGAGTTTGTTGAAAGACAGATAGGAGAGATGGAAGGAGTACTGTTGGAAGCTGAAACTGGAGACTACCTAGGGACACACCGTGGATTTTGGTTTTATACAATTGGTCAGCGACAAGGATTGCGCCTTCCTGGCGGACCCTGGTATGTGGTTGAGAAAGGTGTTCAAAACAATGTGGTTTTTGTCTCAAGGAATTACTACTCGCTGGATAAGAGAAGGCGGACATTTCGTGTTGGATCGCTGAACTGGTTTAGCAATTCTGGACCAACAAACAATGAGCAACTTAAATGCAAGGTACGTCATAGTCCTGAATTTCATGATTGCACCGTGACACAAGAGCAAACATCAGAACATGGAGTTATTTTGGTGGTGCGTCTGTCTGAAGATGATCAAGGTTTAGCAGCTGGTCAGTTTGCGGCCTTCTACCGTGACAATTTATGCCTTGGGTCAGGCATAATTCTGGATTCTTGGGACGAAATGAATTTTCCAGTCTGTGCAAGGGCTTTAGAAATTGCTAGAATGGAGGATAAGTCCAGACTGGGGAAGCCAGTAAAGATAATGAACTTAGAACATATCGTGAAATCAGAAAAGGAGGCTATTGAAGTGGCATGATAGGCACAGTCCCTGCAGCCTTCTCTTGAGTCTTGACTACTCCGTACATTCGTGGTTCTGCAAAGTTGCACGTTAACCCTGCAAAAGCAAGAATCGTGTTGTCCCCAGGAACTCCAGCTGGTTCTTCAAAGGAGGTATGGTTGGCGAGCTTGCATTTCTGAAGAGGGTTCTCTGGATAAAAGAGGCGGATGAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTAAGCTGCCGATCTGGCAGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGCGTCTAGAACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTATCAGGAGATGCTCCTTTCATGCTACTACTAGTACCGGTTTTATTTACGTTGTACAAATGTTAAGGTTATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTCTGATCAT                  ]
[+] EMBL OSS13214A            [               TCCAGAGGAGGGAGGAGCGCCGCCGCCGCCGCCGCCGCTCAGG GAGNAGGTTGCCGGAGCCGCCGCCACCGATGCTGCGCGTGGTCTCCACCCTCCCCGCGCTCCGCCCGCTCCTCGCCGGGAGCACGCTCCTCCTGAACGCTAGACCTCTGCTCCGCTCCCGCCTGATTCGGCGGCCGTTTCGCGCCGTCTCGTCCTCCACGGCGTCCCCGTCGAGCTCCAGCTCCGGCGCCAGGGACTTCGGGGGTNTGGATTTCGGCGATGAGCGCCTTCTGCGGTGCGCGGCGGCGGGGAGAGCGCCGCTGCGGGTGGCGGTGCTGGTGAGCGGCGGGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU056315             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTANGCTGCCGATCTGGCNGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGCGTCTAGAACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTATCAGGAGATGCTCCTTTCATGCTACTACTAGTNCCGGTTTTATTTACGTTGTACAAATGTTAAGGTTATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTCTGATCATATGTTTTATCAAAAAAAA]


>consensus_6935#0 AGAACACAAACCCAATCCAGAGGAGGGAGGAGCGCCGCCGCCGCCGCCGCCGCTCAGGCG AGAGGTTGCCGGAGCCGCCGCCACCGATGCTGCGCGTGGTCTCCACCCTCCCCGCGCTCC GCCCGCTCCTCGCCGGGAGCACGCTCCTCCTGAACGCTAGACCTCTGCTCCGCTCCCGCC TGACTCGGCGGCCGTTTCGCGCCGTCTCGTCCTCCACGGCGTCCCCGTCGAGCTCCAGCT CCGGCGCCAGGGACTTCGGGGGTGTGGATTTCGGCGATGAGCGCCTTCTGCGGTGCGCGG CGGCGGGGAGAGCGCCGCTGCGGGTGGCGGTGCTGGTGAGCGGCGGGGTGGACAGCAGCG TCGCGCTCCGCCTCCTCCACGCCGCCGGCCACCGCTGCACCGCTTTCTACCTCAAAATCT GGTTCCAGGAAGATTTCAGGAACTTTTGGTCTGAATGCCCGTGGGACGACGATTTGAAGT ACGCGCAAGCTGTGTGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTATCTGATG AGTATTGGAACCATGTGGTATCTCACATAATTAACGAGTATCGCAGTGGCCGTACTCCGA ACCCTGATGTTCTTTGCAACACAAGAATAAAGTTTGGAGCTTTCTTAGAAGCTATTGAAA ATTTGGGATTTGATTACATAGCATCTGGACATTATGCACATGTAGTTCATCCATCACCTG ACGATGTTGAAGGGCCATCAGTCCTCCAACTTTCAAAAGACAAGGTGAAGGATCAAACTT ATTTCCTTTCACATCTATCTCAGACCCAGCTTAGAAGGCTTCTTTTTCCACTGGGATGTA TAACAAAGGATGAAGTGCGCAGGCTGGCTGCTCAGATGGACTTGCCTAACCAAGATAGAA AGGATTCCCAGGGGATATGTTTTCTTGGCAAGGTCAAATTTAGTGAGTTTGTTGAAAGAC AGATAGGAGAGATGGAAGGAGTACTGTTGGAAGCTGAAACTGGAGACTACCTAGGGACAC ACCGTGGATTTTGGTTTTATACAATTGGTCAGCGACAAGGATTGCGCCTTCCTGGCGGAC CCTGGTATGTGGTTGAGAAAGGTGTTCAAAACAATGTGGTTTTTGTCTCAAGGAATTACT ACTCGCTGGATAAGAGAAGGCGGACATTTCGTGTTGGATCGCTGAACTGGTTTAGCAATT CTGGACCAACAAACAATGAGCAACTTAAATGCAAGGTACGTCATAGTCCTGAATTTCATG ATTGCACCGTGACACAAGAGCAAACATCAGAACATGGAGTTATTTTGGTGGTGCGTCTGT CTGAAGATGATCAAGGTTTAGCAGCTGGTCAGTTTGCGGCCTTCTACCGTGACAATTTAT GCCTTGGGTCAGGCATAATTCTGGATTCTTGGGACGAAATGAATTTTCCAGTCTGTGCAA GGGCTTTAGAAATTGCTAGAATGGAGGATAAGTCCAGACTGGGGAAGCCAGTAAAGATAA TGAACTTAGAACATATCGTGAAATCAGAAAAGGAGGCTATTGAAGTGGCATGATAGGCAC AGTCCCTGCAGCCTTCTCTTGAGTCTTGACTACTCCGTACATTCGTGGTTCTGCAAAGTT GCACGTTAACCCTGCAAAAGCAAGAATCGTGTTGTCCCCAGGAACTCCAGCTGGTTCTTC AAAGGAGGTATGGTTGGCGAGCTTGCATTTCTGAAGAGGGTTCTCTGGATAAAAGAGGCG GATGAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTAAGCTGCC GATCTGGCAGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGCGTCTAG AACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTATCAGGA GATGCTCCTTTCATGCTACTACTAGTACCGGTTTTATTTACGTTGTACAAATGTTAAGGT TATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTCTGATCATATGTTTTATCAAA AAAAA



consensusID : consensus_6935#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1508
fasta sequence
                              [TGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTATCTGATGAGTATTGGAACCATGTGGAGCTTTCTTAGAAGCTATTGAAAATTTGGGATTTGATTACATAGCATCTGGACATTATGCACATGTAGTTCATCCATCACCTGACGATGTTGAAGGGCCATCAGTCCTCCAACTTTCAAAAGACAAGGTGAAGGATCAAACTTATTTCCTTTCACATCTATCTCAGACCCAGCTTAGAAGGCTTCTTTTTCCACTGGGATGTATAACAAAGGATGAAGTGCGCAGGCTGGCTGCTCAGATGGACTTGCCTAACCAAGATAGAAAGGATTCCCAGGGGATATGTTTTCTTGGCAAGGTCAAATTTAGTGAGTTTGTTGAAAGACAGATAGGAGAGATGGAAGGAGTACTGTTGGAAGCTGAAACTGGAGACTACCTAGGGACACACCGTGGATTTTGGTTTTATACAATTGGTCAGCGACAAGGATTGCGCCTTCCTGGCGGACCCTGGTATGTGGTTGAGAAAGGTGTTCAAAACAATGTGGTTTTTGTCTCAAGGAATTACTACTCGCTGGATAAGAGAAGGCGGACATTTCGTGTTGGATCGCTGAACTGGTTTAGCAATTCTGGACCAACAAACAATGAGCAACTTAAATGCAAGGTACGTCATAGTCCTGAATTTCATGATTGCACCGTGACACAAGAGCAAACATCAGAACATGGAGTTATTTTGGTGGTGCGTCTGTCTGAAGATGATCAAGGTTTAGCAGCTGGTCAGTTTGCGGCCTTCTACCGTGACAATTTATGCCTTGGGTCAGGCATAATTCTGGATTCTTGGGACGAAATGAATTTTCCAGTCTGTGCAAGGGCTTTAGAAATTGCTAGAATGGAGGATAAGTCCAGACTGGGGAAGCCAGTAAAGATAATGAACTTAGAACATATCGTGAAATCAGAAAAGGAGGCTATTGAAGTGGCATGATAGGCACAGTCCCTGCAGCCTTCTCTTGAGTCTTGACTACTCCGTACATTCGTGGTTCTGCAAAGTTGCACGTTAACCCTGCAAAAGCAAGAATCGTGTTGTCCCCAGGAACTCCAGCTGGTTCTTCAAAGGAGGTATGGTTGGCGAGCTTGCATTTCTGAAGAGGGTTCTCTGGATAAAAGAGGCGGATGAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTAAGCTGCCGATCTGGCAGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGCGTCTAGAACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTATCAGGAGATGCTCCTTTCATGCTACTACTAGTACCGGTTTTATTTACGTTGTACAAATGTTAAGGTTATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTCGATCATATGTTTTATCACTTTCTCGTCTCGGTTCGGTTGGTTGGTTCTGTGCCAAATCGAG]

[+] EMBL AK059155             [TGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTATCTGATGAGTATTGGAACCATGTGGAGCTTTCTTAGAAGCTATTGAAAATTTGGGATTTGATTACATAGCATCTGGACATTATGCACATGTAGTTCATCCATCACCTGACGATGTTGAAGGGCCATCAGTCCTCCAACTTTCAAAAGACAAGGTGAAGGATCAAACTTATTTCCTTTCACATCTATCTCAGACCCAGCTTAGAAGGCTTCTTTTTCCACTGGGATGTATAACAAAGGATGAAGTGCGCAGGCTGGCTGCTCAGATGGACTTGCCTAACCAAGATAGAAAGGATTCCCAGGGGATATGTTTTCTTGGCAAGGTCAAATTTAGTGAGTTTGTTGAAAGACAGATAGGAGAGATGGAAGGAGTACTGTTGGAAGCTGAAACTGGAGACTACCTAGGGACACACCGTGGATTTTGGTTTTATACAATTGGTCAGCGACAAGGATTGCGCCTTCCTGGCGGACCCTGGTATGTGGTTGAGAAAGGTGTTCAAAACAATGTGGTTTTTGTCTCAAGGAATTACTACTCGCTGGATAAGAGAAGGCGGACATTTCGTGTTGGATCGCTGAACTGGTTTAGCAATTCTGGACCAACAAACAATGAGCAACTTAAATGCAAGGTACGTCATAGTCCTGAATTTCATGATTGCACCGTGACACAAGAGCAAACATCAGAACATGGAGTTATTTTGGTGGTGCGTCTGTCTGAAGATGATCAAGGTTTAGCAGCTGGTCAGTTTGCGGCCTTCTACCGTGACAATTTATGCCTTGGGTCAGGCATAATTCTGGATTCTTGGGACGAAATGAATTTTCCAGTCTGTGCAAGGGCTTTAGAAATTGCTAGAATGGAGGATAAGTCCAGACTGGGGAAGCCAGTAAAGATAATGAACTTAGAACATATCGTGAAATCAGAAAAGGAGGCTATTGAAGTGGCATGATAGGCACAGTCCCTGCAGCCTTCTCTTGAGTCTTGACTACTCCGTACATTCGTGGTTCTGCAAAGTTGCACGTTAACCCTGCAAAAGCAAGAATCGTGTTGTCCCCAGGAACTCCAGCTGGTTCTTCAAAGGAGGTATGGTTGGCGAGCTTGCATTTCTGAAGAGGGTTCTCTGGATAAAAGAGGCGGATGAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTAAGCTGCCGATCTGGCAGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGCGTCTAGAACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTATCAGGAGATGCTCCTTTCATGCTACTACTAGTACCGGTTTTATTTACGTTGTACAAATGTTAAGGTTATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTCGATCATATGTTTTATCACTTTCTCGTCTCGGTTCGGTTGGTTGGTTCTGTGCCAAATCGAG]


>consensus_6935#1 TGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTATCTGATGAGTATTGGAACCAT GTGGAGCTTTCTTAGAAGCTATTGAAAATTTGGGATTTGATTACATAGCATCTGGACATT ATGCACATGTAGTTCATCCATCACCTGACGATGTTGAAGGGCCATCAGTCCTCCAACTTT CAAAAGACAAGGTGAAGGATCAAACTTATTTCCTTTCACATCTATCTCAGACCCAGCTTA GAAGGCTTCTTTTTCCACTGGGATGTATAACAAAGGATGAAGTGCGCAGGCTGGCTGCTC AGATGGACTTGCCTAACCAAGATAGAAAGGATTCCCAGGGGATATGTTTTCTTGGCAAGG TCAAATTTAGTGAGTTTGTTGAAAGACAGATAGGAGAGATGGAAGGAGTACTGTTGGAAG CTGAAACTGGAGACTACCTAGGGACACACCGTGGATTTTGGTTTTATACAATTGGTCAGC GACAAGGATTGCGCCTTCCTGGCGGACCCTGGTATGTGGTTGAGAAAGGTGTTCAAAACA ATGTGGTTTTTGTCTCAAGGAATTACTACTCGCTGGATAAGAGAAGGCGGACATTTCGTG TTGGATCGCTGAACTGGTTTAGCAATTCTGGACCAACAAACAATGAGCAACTTAAATGCA AGGTACGTCATAGTCCTGAATTTCATGATTGCACCGTGACACAAGAGCAAACATCAGAAC ATGGAGTTATTTTGGTGGTGCGTCTGTCTGAAGATGATCAAGGTTTAGCAGCTGGTCAGT TTGCGGCCTTCTACCGTGACAATTTATGCCTTGGGTCAGGCATAATTCTGGATTCTTGGG ACGAAATGAATTTTCCAGTCTGTGCAAGGGCTTTAGAAATTGCTAGAATGGAGGATAAGT CCAGACTGGGGAAGCCAGTAAAGATAATGAACTTAGAACATATCGTGAAATCAGAAAAGG AGGCTATTGAAGTGGCATGATAGGCACAGTCCCTGCAGCCTTCTCTTGAGTCTTGACTAC TCCGTACATTCGTGGTTCTGCAAAGTTGCACGTTAACCCTGCAAAAGCAAGAATCGTGTT GTCCCCAGGAACTCCAGCTGGTTCTTCAAAGGAGGTATGGTTGGCGAGCTTGCATTTCTG AAGAGGGTTCTCTGGATAAAAGAGGCGGATGAACATCATTATCCATGCAAGAATTGACCT GGCATAAATTTTCAGCGGTAAGCTGCCGATCTGGCAGGAAATCACACGAAGGGTCTCGGA ATTCCACTCATGAGCCAAAGCGTCTAGAACTCTAGATCCGATCGTCAGTTAAGCATTACA GTATCCTCTTATAGCAGTGTATCAGGAGATGCTCCTTTCATGCTACTACTAGTACCGGTT TTATTTACGTTGTACAAATGTTAAGGTTATTGTAGGCGAACATCGAATGGTAGAATTTCT ACCATTCGATCATATGTTTTATCACTTTCTCGTCTCGGTTCGGTTGGTTGGTTCTGTGCC AAATCGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6935#0      AGAACACAAACCCAATCCAGAGGAGGGAGGAGCGCCGCCGCCGCCGCCGCCGCTCAGGCG 60
consensus_6935#1      ------------------------------------------------------------
                                                                                  

consensus_6935#0      AGAGGTTGCCGGAGCCGCCGCCACCGATGCTGCGCGTGGTCTCCACCCTCCCCGCGCTCC 120
consensus_6935#1      ------------------------------------------------------------
                                                                                  

consensus_6935#0      GCCCGCTCCTCGCCGGGAGCACGCTCCTCCTGAACGCTAGACCTCTGCTCCGCTCCCGCC 180
consensus_6935#1      ------------------------------------------------------------
                                                                                  

consensus_6935#0      TGACTCGGCGGCCGTTTCGCGCCGTCTCGTCCTCCACGGCGTCCCCGTCGAGCTCCAGCT 240
consensus_6935#1      ------------------------------------------------------------
                                                                                  

consensus_6935#0      CCGGCGCCAGGGACTTCGGGGGTGTGGATTTCGGCGATGAGCGCCTTCTGCGGTGCGCGG 300
consensus_6935#1      ------------------------------------------------------------
                                                                                  

consensus_6935#0      CGGCGGGGAGAGCGCCGCTGCGGGTGGCGGTGCTGGTGAGCGGCGGGGTGGACAGCAGCG 360
consensus_6935#1      ------------------------------------------------------------
                                                                                  

consensus_6935#0      TCGCGCTCCGCCTCCTCCACGCCGCCGGCCACCGCTGCACCGCTTTCTACCTCAAAATCT 420
consensus_6935#1      ------------------------------------------------------------
                                                                                  

consensus_6935#0      GGTTCCAGGAAGATTTCAGGAACTTTTGGTCTGAATGCCCGTGGGACGACGATTTGAAGT 480
consensus_6935#1      ------------------------------------------------------------
                                                                                  

consensus_6935#0      ACGCGCAAGCTGTGTGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTATCTGATG 540
consensus_6935#1      --------------TGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTATCTGATG 46
                                    **********************************************

consensus_6935#0      AGTATTGGAACCATGTGGTATCTCACATAATTAACGAGTATCGCAGTGGCCGTACTCCGA 600
consensus_6935#1      AGTATTGGAACCATGTGG------------------------------------------ 64
                      ******************                                          

consensus_6935#0      ACCCTGATGTTCTTTGCAACACAAGAATAAAGTTTGGAGCTTTCTTAGAAGCTATTGAAA 660
consensus_6935#1      -------------------------------------AGCTTTCTTAGAAGCTATTGAAA 87
                                                           ***********************

consensus_6935#0      ATTTGGGATTTGATTACATAGCATCTGGACATTATGCACATGTAGTTCATCCATCACCTG 720
consensus_6935#1      ATTTGGGATTTGATTACATAGCATCTGGACATTATGCACATGTAGTTCATCCATCACCTG 147
                      ************************************************************

consensus_6935#0      ACGATGTTGAAGGGCCATCAGTCCTCCAACTTTCAAAAGACAAGGTGAAGGATCAAACTT 780
consensus_6935#1      ACGATGTTGAAGGGCCATCAGTCCTCCAACTTTCAAAAGACAAGGTGAAGGATCAAACTT 207
                      ************************************************************

consensus_6935#0      ATTTCCTTTCACATCTATCTCAGACCCAGCTTAGAAGGCTTCTTTTTCCACTGGGATGTA 840
consensus_6935#1      ATTTCCTTTCACATCTATCTCAGACCCAGCTTAGAAGGCTTCTTTTTCCACTGGGATGTA 267
                      ************************************************************

consensus_6935#0      TAACAAAGGATGAAGTGCGCAGGCTGGCTGCTCAGATGGACTTGCCTAACCAAGATAGAA 900
consensus_6935#1      TAACAAAGGATGAAGTGCGCAGGCTGGCTGCTCAGATGGACTTGCCTAACCAAGATAGAA 327
                      ************************************************************

consensus_6935#0      AGGATTCCCAGGGGATATGTTTTCTTGGCAAGGTCAAATTTAGTGAGTTTGTTGAAAGAC 960
consensus_6935#1      AGGATTCCCAGGGGATATGTTTTCTTGGCAAGGTCAAATTTAGTGAGTTTGTTGAAAGAC 387
                      ************************************************************

consensus_6935#0      AGATAGGAGAGATGGAAGGAGTACTGTTGGAAGCTGAAACTGGAGACTACCTAGGGACAC 1020
consensus_6935#1      AGATAGGAGAGATGGAAGGAGTACTGTTGGAAGCTGAAACTGGAGACTACCTAGGGACAC 447
                      ************************************************************

consensus_6935#0      ACCGTGGATTTTGGTTTTATACAATTGGTCAGCGACAAGGATTGCGCCTTCCTGGCGGAC 1080
consensus_6935#1      ACCGTGGATTTTGGTTTTATACAATTGGTCAGCGACAAGGATTGCGCCTTCCTGGCGGAC 507
                      ************************************************************

consensus_6935#0      CCTGGTATGTGGTTGAGAAAGGTGTTCAAAACAATGTGGTTTTTGTCTCAAGGAATTACT 1140
consensus_6935#1      CCTGGTATGTGGTTGAGAAAGGTGTTCAAAACAATGTGGTTTTTGTCTCAAGGAATTACT 567
                      ************************************************************

consensus_6935#0      ACTCGCTGGATAAGAGAAGGCGGACATTTCGTGTTGGATCGCTGAACTGGTTTAGCAATT 1200
consensus_6935#1      ACTCGCTGGATAAGAGAAGGCGGACATTTCGTGTTGGATCGCTGAACTGGTTTAGCAATT 627
                      ************************************************************

consensus_6935#0      CTGGACCAACAAACAATGAGCAACTTAAATGCAAGGTACGTCATAGTCCTGAATTTCATG 1260
consensus_6935#1      CTGGACCAACAAACAATGAGCAACTTAAATGCAAGGTACGTCATAGTCCTGAATTTCATG 687
                      ************************************************************

consensus_6935#0      ATTGCACCGTGACACAAGAGCAAACATCAGAACATGGAGTTATTTTGGTGGTGCGTCTGT 1320
consensus_6935#1      ATTGCACCGTGACACAAGAGCAAACATCAGAACATGGAGTTATTTTGGTGGTGCGTCTGT 747
                      ************************************************************

consensus_6935#0      CTGAAGATGATCAAGGTTTAGCAGCTGGTCAGTTTGCGGCCTTCTACCGTGACAATTTAT 1380
consensus_6935#1      CTGAAGATGATCAAGGTTTAGCAGCTGGTCAGTTTGCGGCCTTCTACCGTGACAATTTAT 807
                      ************************************************************

consensus_6935#0      GCCTTGGGTCAGGCATAATTCTGGATTCTTGGGACGAAATGAATTTTCCAGTCTGTGCAA 1440
consensus_6935#1      GCCTTGGGTCAGGCATAATTCTGGATTCTTGGGACGAAATGAATTTTCCAGTCTGTGCAA 867
                      ************************************************************

consensus_6935#0      GGGCTTTAGAAATTGCTAGAATGGAGGATAAGTCCAGACTGGGGAAGCCAGTAAAGATAA 1500
consensus_6935#1      GGGCTTTAGAAATTGCTAGAATGGAGGATAAGTCCAGACTGGGGAAGCCAGTAAAGATAA 927
                      ************************************************************

consensus_6935#0      TGAACTTAGAACATATCGTGAAATCAGAAAAGGAGGCTATTGAAGTGGCATGATAGGCAC 1560
consensus_6935#1      TGAACTTAGAACATATCGTGAAATCAGAAAAGGAGGCTATTGAAGTGGCATGATAGGCAC 987
                      ************************************************************

consensus_6935#0      AGTCCCTGCAGCCTTCTCTTGAGTCTTGACTACTCCGTACATTCGTGGTTCTGCAAAGTT 1620
consensus_6935#1      AGTCCCTGCAGCCTTCTCTTGAGTCTTGACTACTCCGTACATTCGTGGTTCTGCAAAGTT 1047
                      ************************************************************

consensus_6935#0      GCACGTTAACCCTGCAAAAGCAAGAATCGTGTTGTCCCCAGGAACTCCAGCTGGTTCTTC 1680
consensus_6935#1      GCACGTTAACCCTGCAAAAGCAAGAATCGTGTTGTCCCCAGGAACTCCAGCTGGTTCTTC 1107
                      ************************************************************

consensus_6935#0      AAAGGAGGTATGGTTGGCGAGCTTGCATTTCTGAAGAGGGTTCTCTGGATAAAAGAGGCG 1740
consensus_6935#1      AAAGGAGGTATGGTTGGCGAGCTTGCATTTCTGAAGAGGGTTCTCTGGATAAAAGAGGCG 1167
                      ************************************************************

consensus_6935#0      GATGAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTAAGCTGCC 1800
consensus_6935#1      GATGAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTAAGCTGCC 1227
                      ************************************************************

consensus_6935#0      GATCTGGCAGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGCGTCTAG 1860
consensus_6935#1      GATCTGGCAGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGCGTCTAG 1287
                      ************************************************************

consensus_6935#0      AACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTATCAGGA 1920
consensus_6935#1      AACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTATCAGGA 1347
                      ************************************************************

consensus_6935#0      GATGCTCCTTTCATGCTACTACTAGTACCGGTTTTATTTACGTTGTACAAATGTTAAGGT 1980
consensus_6935#1      GATGCTCCTTTCATGCTACTACTAGTACCGGTTTTATTTACGTTGTACAAATGTTAAGGT 1407
                      ************************************************************

consensus_6935#0      TATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTCTGATCATATGTTTTATCAAA 2040
consensus_6935#1      TATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTC-GATCATATGTTTTATCACT 1466
                      **************************************** *****************  

consensus_6935#0      AAAAA------------------------------------- 2045
consensus_6935#1      TTCTCGTCTCGGTTCGGTTGGTTGGTTCTGTGCCAAATCGAG 1508
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)