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Oryza sativa
cluster # 6937 cluster # 6937       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6937#0 length = 1730 sequences # 1  
consensus_6937#1 length = 1223 sequences # 3  

consensusID : consensus_6937#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1730
fasta sequence
                              [GACTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCGCTCCGCGGCTCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAGGAGGGAGATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGGCAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAGTCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACGGCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAACAGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATGGTTAGTTTTACTAAAAGTACATTTTGTGCCAAGAATTTTATTCTTCTCATTTGCTTTGTTGTCCTATTGTTCTCATGTTAACTCCAATTTAACACCTTCTGCAATGATGTGAGTAGATGTCTAACAAGGCCAACCCCTGAAAAGAAACTCTGATCAGTAAATCCAGATTCTAGTTATGAGGAGTTTGTGTGCTCATATCTAAATTAGTCATGTACAAAAAATATTCACAAACAGTTCAGAAACTTTCATTAGTTACTATTGAATCTCACTTTCATTTAGATTTGGAAGCAATGTTTCGTGACTTTGTTCATTTTAAGCTAGGTTTACTTTTTTGGAGATTCTCTGACTGGTTGGCTGCATTCATCCATTGGTTATTTTTAAAATGGGTCTCTCAATCTTCATGACAGCTCTGCAGAAGCAGTTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTTGCAATCTGTGTTGCTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCTCATGGCCTGCTTGATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAACAACAGTATATTGGAGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCAGATTTTGATTTCATTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGCGCCAACTTAAGCGGGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCACATTGTTCATATGTCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATTGTGGACCTAATAACACCAGGAGTCTACAAGATATTGAGAGATGGAAGTTCAAGGCAGGAAACGACAGCGGTGCTCGGCAAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGTTGACCTCATAAAATTGGATCATGATTCAATTTGAAATAGTATACTCTTTGTTGGTGATTAAATGTAACAGAAGTCAGAATCATGACCGGAGATGATGTCATCTCGATAGAAAAACAATCATACGCTAATGGCCATGGGAAAAGGATCGGCCGTCCAAGCTACAGCAAACCTGCTGAAATCCTTCAGCGAGAAAGAAAGAATAACTGGAAATGAGTACAAGAGACTCCAAAAGTTTAGCATAATGGCTAATATGGGTACTATTAGGCTATATTTTTCCCTTTTGTGTAGCTCCATTTCAATTCAGCTGCAATTTTTCAGAGTAAAATTGGTACATGAATCATGAATGGCTAATATGGGTACTATTAGGCTA]

[+] EMBL AK065564             [GACTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCGCTCCGCGGCTCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAGGAGGGAGATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGGCAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAGTCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACGGCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAACAGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATGGTTAGTTTTACTAAAAGTACATTTTGTGCCAAGAATTTTATTCTTCTCATTTGCTTTGTTGTCCTATTGTTCTCATGTTAACTCCAATTTAACACCTTCTGCAATGATGTGAGTAGATGTCTAACAAGGCCAACCCCTGAAAAGAAACTCTGATCAGTAAATCCAGATTCTAGTTATGAGGAGTTTGTGTGCTCATATCTAAATTAGTCATGTACAAAAAATATTCACAAACAGTTCAGAAACTTTCATTAGTTACTATTGAATCTCACTTTCATTTAGATTTGGAAGCAATGTTTCGTGACTTTGTTCATTTTAAGCTAGGTTTACTTTTTTGGAGATTCTCTGACTGGTTGGCTGCATTCATCCATTGGTTATTTTTAAAATGGGTCTCTCAATCTTCATGACAGCTCTGCAGAAGCAGTTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTTGCAATCTGTGTTGCTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCTCATGGCCTGCTTGATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAACAACAGTATATTGGAGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCAGATTTTGATTTCATTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGCGCCAACTTAAGCGGGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCACATTGTTCATATGTCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATTGTGGACCTAATAACACCAGGAGTCTACAAGATATTGAGAGATGGAAGTTCAAGGCAGGAAACGACAGCGGTGCTCGGCAAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGTTGACCTCATAAAATTGGATCATGATTCAATTTGAAATAGTATACTCTTTGTTGGTGATTAAATGTAACAGAAGTCAGAATCATGACCGGAGATGATGTCATCTCGATAGAAAAACAATCATACGCTAATGGCCATGGGAAAAGGATCGGCCGTCCAAGCTACAGCAAACCTGCTGAAATCCTTCAGCGAGAAAGAAAGAATAACTGGAAATGAGTACAAGAGACTCCAAAAGTTTAGCATAATGGCTAATATGGGTACTATTAGGCTATATTTTTCCCTTTTGTGTAGCTCCATTTCAATTCAGCTGCAATTTTTCAGAGTAAAATTGGTACATGAATCATGAATGGCTAATATGGGTACTATTAGGCTA]


>consensus_6937#0 GACTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCGCTCCGCG GCTCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAGGAGGGAG ATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGG CAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAG TCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACG GCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAAC AGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATGG TTAGTTTTACTAAAAGTACATTTTGTGCCAAGAATTTTATTCTTCTCATTTGCTTTGTTG TCCTATTGTTCTCATGTTAACTCCAATTTAACACCTTCTGCAATGATGTGAGTAGATGTC TAACAAGGCCAACCCCTGAAAAGAAACTCTGATCAGTAAATCCAGATTCTAGTTATGAGG AGTTTGTGTGCTCATATCTAAATTAGTCATGTACAAAAAATATTCACAAACAGTTCAGAA ACTTTCATTAGTTACTATTGAATCTCACTTTCATTTAGATTTGGAAGCAATGTTTCGTGA CTTTGTTCATTTTAAGCTAGGTTTACTTTTTTGGAGATTCTCTGACTGGTTGGCTGCATT CATCCATTGGTTATTTTTAAAATGGGTCTCTCAATCTTCATGACAGCTCTGCAGAAGCAG TTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTTGCAATCTGTGTTG CTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCTCATGGCCTGCTTG ATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAACAACAGTATATTGG AGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCAGATTTTGATTTCA TTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGCGCCAACTTAAGCG GGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCACATTGTTCATATG TCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATTGTGGACCTAATAA CACCAGGAGTCTACAAGATATTGAGAGATGGAAGTTCAAGGCAGGAAACGACAGCGGTGC TCGGCAAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGTTGACCTCATAAAATTGGATC ATGATTCAATTTGAAATAGTATACTCTTTGTTGGTGATTAAATGTAACAGAAGTCAGAAT CATGACCGGAGATGATGTCATCTCGATAGAAAAACAATCATACGCTAATGGCCATGGGAA AAGGATCGGCCGTCCAAGCTACAGCAAACCTGCTGAAATCCTTCAGCGAGAAAGAAAGAA TAACTGGAAATGAGTACAAGAGACTCCAAAAGTTTAGCATAATGGCTAATATGGGTACTA TTAGGCTATATTTTTCCCTTTTGTGTAGCTCCATTTCAATTCAGCTGCAATTTTTCAGAG TAAAATTGGTACATGAATCATGAATGGCTAATATGGGTACTATTAGGCTA



consensusID : consensus_6937#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1223
fasta sequence
                              [CTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCGCTCCGCGGCTCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAGGAGGGAGATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGGCAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAGTCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACGGCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAACAGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATGCTCTGCAGAAGCAGTTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTTGCAATCTGTGTTGCTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCTCATGGCCTGCTTGATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAACAACAGTATATTGGAGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCAGATTTTGATTTCATTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGCGCCAACTTAAGCGGGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCACATTGTTCATATGTCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATTGTGGACCTAATAACACCAGGAGTCTACAAGATATTGAGAGAT-GGAAGTTCAA-GGCAGG-AAACGACAGCGGTGCTCGGC-AAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGTTGACCTCAT-AAAATTGGTACCATCAAATACTAGTCCCTTTGTTATCTATCTGGCTTCTTGCTTAGTTAGGTGCTGTACCAGAATATAGGTTGTTGTTTGTGCTTTTCTTTTTCATATTCTGAATCAGAAGGTGTCAGCTTCCTGTTTCAATGTCAATGCCCTTACAGTATCACGTGAACTTCGATTGCTACACTACAGTTCATTCTATGGTAGATTACACTAGCATGCCTATGCAAGCTAAAAGAAATATTGATTGTAATGGATTTTAATAT]

[+] EMBL AK067825             [CTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCGCTCCGCGGCTCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAGGAGGGAGATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGGCAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAGTCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACGGCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAACAGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATGCTCTGCAGAAGCAGTTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTTGCAATCTGTGTTGCTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCTCATGGCCTGCTTGATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAACAACAGTATATTGGAGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCAGATTTTGATTTCATTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGCGCCAACTTAAGCGGGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCACATTGTTCATATGTCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATTGTGGACCTAATAACACCAGGAGTCTACAAGATATTGAGAGAT GGAAGTTCAA GGCAGG AAACGACAGCGGTGCTCGGC AAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGTTGACCTCAT AAAATTGGTACCATCAAATACTAGTCCCTTTGTTATCTATCTGGCTTCTTGCTTAGTTAGGTGCTGTACCAGAATATAGGTTGTTGTTTGTGCTTTTCTTTTTCATATTCTGAATCAGAAGGTGTCAGCTTCCTGTTTCAATGTCAATGCCCTTACAGTATCACGTGAACTTCGATTGCTACACTACAGTTCATTCTATGGTAGATTACACTAGCATGCCTATGCAAGCTAAAAGAAATATTGATTGTAAT            ]
[-] EMBL AU063465             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACAAGATATTGACNGATGGGAAGTTCAANGCCAGGAAAACGACAGCNGTGCTCGGCNAAGTTTGGCTTTGGTGAAGCTTGGTGACAACTTGGTGACCTCAT AAAATTGGTACCATCAAATACTAGTCCCTTTGTTATCTATCTGGCNTCTTGCNTAGTTAGGTGCTGTACCAGAATATAGGTTGTTGTTTGTGCTTTTCTTTTTCATATTCTGAATCAGAAGGTGTCAGCTTCCTGTTTCAATGTCAATGCCCTTACAGTATCACGTGAACTTCGATTGCTACACTACAGTTCATTCTATGGTAGATTACACTAGCATGCCTATGCAAGCTAAAAGAAATATTGATTGTAATGGATTTTAATAT]
[-] EMBL AU063450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     nCTTGTTGACCTCATAAAAATTGGTACCATCAAATACTAGTCCCTTTGTTATCTANCTGNCTTCTTGCTTAGTTAGGTGCTGTACCAGAATATAGGTTGTTGTNTGTGCTTTTCTTTTTCATATTCTGAATCAGAAGGTGTCAGCTTCCTGTTTCAATGTCAATGCCCTTACAGTATCACGTGAACTTCGATTGCTACACTACAGTTCATTCTATGGTAGATTACACTAGCATGCCTATGCAAGCTAAAAGAAATATTGATTGTAATGGATTTTAATAT]


>consensus_6937#1 CTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCGCTCCGCGGC TCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAGGAGGGAGAT GAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGGCA ACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAGTC TGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACGGC AGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAACAG GGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATGCTC TGCAGAAGCAGTTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTTGC AATCTGTGTTGCTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCTCA TGGCCTGCTTGATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAACAA CAGTATATTGGAGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCAGA TTTTGATTTCATTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGCGC CAACTTAAGCGGGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCACA TTGTTCATATGTCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATTGT GGACCTAATAACACCAGGAGTCTACAAGATATTGAGAGATGGAAGTTCAAGGCAGGAAAC GACAGCGGTGCTCGGCAAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGTTGACCTCAT AAAATTGGTACCATCAAATACTAGTCCCTTTGTTATCTATCTGGCTTCTTGCTTAGTTAG GTGCTGTACCAGAATATAGGTTGTTGTTTGTGCTTTTCTTTTTCATATTCTGAATCAGAA GGTGTCAGCTTCCTGTTTCAATGTCAATGCCCTTACAGTATCACGTGAACTTCGATTGCT ACACTACAGTTCATTCTATGGTAGATTACACTAGCATGCCTATGCAAGCTAAAAGAAATA TTGATTGTAATGGATTTTAATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6937#0      GACTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCGCTCCGCG 60
consensus_6937#1      --CTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCGCTCCGCG 58
                        **********************************************************

consensus_6937#0      GCTCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAGGAGGGAG 120
consensus_6937#1      GCTCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAGGAGGGAG 118
                      ************************************************************

consensus_6937#0      ATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGG 180
consensus_6937#1      ATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGG 178
                      ************************************************************

consensus_6937#0      CAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAG 240
consensus_6937#1      CAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAG 238
                      ************************************************************

consensus_6937#0      TCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACG 300
consensus_6937#1      TCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACG 298
                      ************************************************************

consensus_6937#0      GCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAAC 360
consensus_6937#1      GCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAAC 358
                      ************************************************************

consensus_6937#0      AGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATGG 420
consensus_6937#1      AGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATG- 417
                      *********************************************************** 

consensus_6937#0      TTAGTTTTACTAAAAGTACATTTTGTGCCAAGAATTTTATTCTTCTCATTTGCTTTGTTG 480
consensus_6937#1      ------------------------------------------------------------
                                                                                  

consensus_6937#0      TCCTATTGTTCTCATGTTAACTCCAATTTAACACCTTCTGCAATGATGTGAGTAGATGTC 540
consensus_6937#1      ------------------------------------------------------------
                                                                                  

consensus_6937#0      TAACAAGGCCAACCCCTGAAAAGAAACTCTGATCAGTAAATCCAGATTCTAGTTATGAGG 600
consensus_6937#1      ------------------------------------------------------------
                                                                                  

consensus_6937#0      AGTTTGTGTGCTCATATCTAAATTAGTCATGTACAAAAAATATTCACAAACAGTTCAGAA 660
consensus_6937#1      ------------------------------------------------------------
                                                                                  

consensus_6937#0      ACTTTCATTAGTTACTATTGAATCTCACTTTCATTTAGATTTGGAAGCAATGTTTCGTGA 720
consensus_6937#1      ------------------------------------------------------------
                                                                                  

consensus_6937#0      CTTTGTTCATTTTAAGCTAGGTTTACTTTTTTGGAGATTCTCTGACTGGTTGGCTGCATT 780
consensus_6937#1      ------------------------------------------------------------
                                                                                  

consensus_6937#0      CATCCATTGGTTATTTTTAAAATGGGTCTCTCAATCTTCATGACAGCTCTGCAGAAGCAG 840
consensus_6937#1      ----------------------------------------------CTCTGCAGAAGCAG 431
                                                                    **************

consensus_6937#0      TTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTTGCAATCTGTGTTG 900
consensus_6937#1      TTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTTGCAATCTGTGTTG 491
                      ************************************************************

consensus_6937#0      CTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCTCATGGCCTGCTTG 960
consensus_6937#1      CTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCTCATGGCCTGCTTG 551
                      ************************************************************

consensus_6937#0      ATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAACAACAGTATATTGG 1020
consensus_6937#1      ATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAACAACAGTATATTGG 611
                      ************************************************************

consensus_6937#0      AGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCAGATTTTGATTTCA 1080
consensus_6937#1      AGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCAGATTTTGATTTCA 671
                      ************************************************************

consensus_6937#0      TTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGCGCCAACTTAAGCG 1140
consensus_6937#1      TTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGCGCCAACTTAAGCG 731
                      ************************************************************

consensus_6937#0      GGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCACATTGTTCATATG 1200
consensus_6937#1      GGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCACATTGTTCATATG 791
                      ************************************************************

consensus_6937#0      TCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATTGTGGACCTAATAA 1260
consensus_6937#1      TCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATTGTGGACCTAATAA 851
                      ************************************************************

consensus_6937#0      CACCAGGAGTCTACAAGATATTGAGAGATGGAAGTTCAAGGCAGGAAACGACAGCGGTGC 1320
consensus_6937#1      CACCAGGAGTCTACAAGATATTGAGAGATGGAAGTTCAAGGCAGGAAACGACAGCGGTGC 911
                      ************************************************************

consensus_6937#0      TCGGCAAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGTTGACCTCATAAAATTGGATC 1380
consensus_6937#1      TCGGCAAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGTTGACCTCATAAAATTGG--T 969
                      *********************************************************   

consensus_6937#0      ATGATTCAATTTGAAATAGTATACTCTTTGTTGGTGATTAAATGTAACAGAAGTCAGAAT 1440
consensus_6937#1      ACCATCAAATACTAGTCCCTTTGTTATCTATCTGGCTTCTTGCTTAGTTAGGTGCTGTAC 1029
                      *  **  ***   *     * *  * * * *  *   *      **        * * * 

consensus_6937#0      CATGACCGGAGATGATGTCATCTCGATAGAAAAACAATCATACGCTAATGGCCATGGGAA 1500
consensus_6937#1      CAGAATATAGGTTGTTGTTTGTGCTTTT----CTTTTTCATATTCTGA--ATCAGAAGGT 1083
                      **  *     * ** ***     *  *          *****  ** *    **   *  

consensus_6937#0      AAGGATCGGCCGTCCAAGCTACAGCAAACCTGCTGAAATCCTTCAGCGAGAAAGAAAGAA 1560
consensus_6937#1      GTCAGCTTCCTGTTTCAATGTCAATGCCCTTACAGTATCACGTGAACTTCGATTGCTACA 1143
                               * **   *    **     * * * * *   * * * *    *       *

consensus_6937#0      TAACTGGAAATGAGTACAAGAGACTCCAAAAGTTTAGC-ATAATGGCTAATATGGGTACT 1619
consensus_6937#1      CTACAGTTCATTC-TATGGTAGATTACACTAGCATGCCTATGCAAGCTAAAAGAAATATT 1202
                        ** *   **   **    *** * **  **  *  * **    ***** *    ** *

consensus_6937#0      -ATTAGGCTATATTTTTCCCTTTTGTGTAGCTCCATTTCAATTCAGCTGCAATTTTTCAG 1678
consensus_6937#1      GATTGTAATGGATTTTAATAT--------------------------------------- 1223
                       ***    *  *****    *                                       

consensus_6937#0      AGTAAAATTGGTACATGAATCATGAATGGCTAATATGGGTACTATTAGGCTA 1730
consensus_6937#1      ----------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)