cluster # 6954

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Oryza sativa
cluster # 6954 cluster # 6954 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6954#0 length = 894 sequences # 4
consensusID : consensus_6954#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 894
fasta sequence
                              [TCCTCCCATTCACCAACGGATTCACTGTGTCAAACCTCCGATCTCTGCAATGGCAGCAACGGCGCAGGGCGGCGGCGGGGCGGTGTCCGTGCAGCACGTGGCGAGGGCGTCGTCGGACGAGCTCCTGCGCAAGTTCGCCGACCCGGACGCGCACGCCAAGCAGATCACGCCGCCGCGGCGCAGCCTCGCGCTGCGGCGGAAGCGGTCGTCCAGGAGGGTGGCGTCGGGGCTC-TCCGCGAGGGATTTGGAGTCGGGGGCGGAGCTCGCGGC-GCCCAAGCGGAGGCGGAGCATCGGCGGGTCCACCGAGTGGAAGGCCGGGCTGCTGCTGCCGAC-GACCACCACGGCCTCCGCCCGCAAGGGATCCGCCGCGAGCCACTCCCACCGGGGCGGGGCCGCGCGCCTCGATGACGCCGCCGGGATC-GGCCTCCTCCTCGCCGCGTTGGAGCGGACATGGAGGAAGACGGTGGCGGGGGCGTCGAAGATGTTCGTGGAGAGGCACCGCACCAACCACGTGCTGCTCATCAGCGACATGGTCTGAGCTCTGA-ACTCTAA-ACTG-AAGCCTCTGCCATGACAGGTGGCCGAGCTGTGACTGATTCTTCTCTCGTCATCGAGCTCTCCTGCTCGGGTTGGTTAATTGGTTTCCTTCGAATTGAATTCGTTTATGACTGATCGATTCTACAGTTTAGCTAGAATAAAATGG-CAGAAAAGAACAACACAAAATTGAACTAGCTGTGTAGTTCAGGTAGAGTAGGTTCTTTGACTCCTGCCTCTGTGTTTGCTTTTATTCACTCGTTGTTTCTTTATACTCGGTTGAATCATCGTCTCGGCGACCACGTTGTAAATTCAAGTTTGCAATATCAATACCAGTGCTGTTCTTCTCAGAGAAAAAAAAGA]

[+] EMBL AK064718             [TCCTCCCATTCACCAACGGATTCACTGTGTCAAACCTCCGATCTCTGCAATGGCAGCAACGGCGCAGGGCGGCGGCGGGGCGGTGTCCGTGCAGCACGTGGCGAGGGCGTCGTCGGACGAGCTCCTGCGCAAGTTCGCCGACCCGGACGCGCACGCCAAGCAGATCACGCCGCCGCGGCGCAGCCTCGCGCTGCGGCGGAAGCGGTCGTCCAGGAGGGTGGCGTCGGGGCTC TCCGCGAGGGATTTGGAGTCGGGGGCGGAGCTCGCGGC GCCCAAGCGGAGGCGGAGCATCGGCGGGTCCACCGAGTGGAAGGCCGGGCTGCTGCTGCCGAC GACCACCACGGCCTCCGCCCGCAAGGGATCCGCCGCGAGCCACTCCCACCGGGGCGGGGCCGCGCGCCTCGATGACGCCGCCGGGATC GGCCTCCTCCTCGCCGCGTTGGAGCGGACATGGAGGAAGACGGTGGCGGGGGCGTCGAAGATGTTCGTGGAGAGGCACCGCACCAACCACGTGCTGCTCATCAGCGACATGGTCTGAGCTCTGA ACTCTAA ACTG AAGCCTCTGCCATGACAGGTGGCCGAGCTGTGACTGATTCTTCTCTCGTCATCGAGCTCTCCTGCTCGGGTTGGTTAATTGGTTTCCTTCGAATTGAATTCGTTTATGACTGATCGATTCTACAGTTTAGCTAGAATAAAATGG CAGAAAAGAACAACACAAAATTGAACTAGCTGTGTAGTTCAGGTAGAGTAGGTTCTTTGACTCCTGCCTCTGTGTTTGCTTTTATTCACTCGTTGTTTCTTTATACTCGGTTGAATCATCGTCTCGGCGACCACGTTGTAAATTCAAGTTTGCAATATCAATACCAGTGCTGTT                    ]
[+] EMBL OSR08892A            [                                     CCGATCTCTGCAATGGCAGCAACGGCGCAGGGCGGCGGCGGGGCGGTGTCCGTGCAGCACGTGGCGAGGGCGTCGTCGGACGAGCTCCTNCGCAAGTTCGCCGACCCGGACGCGCACGNCAAGCAGATCACGTCGNCGNGGCGCAG CTCGCGCTNCGGCGGAAGCGGTCGTCCAGGAGGGTGGCGTCGGGGCTC TNCGCGAGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU078251             [                                                                                                                                                                                                       AACCGGTNGTCCA GAAGGTGGCGTCGGGGCTCTTCCGCGAGGGATTTGNAGTCGGGGCCGAAGCTCGCGGCGGCCCAA CGGAGGCGGAGCATCGGCGGGTCCACCGA T GAAGGCCGGGCTGCTGCTGCCGACGGACCACCACGGCCTCCGCCCGCAAGGGATCCGCCGCGAGCCACTCCCACCGGGGCGGGGCCGCGCGCCTCGATGACGCCGCCGGGATCGGGCCTCCTCCTCGCCGCGTTGGAGCGGACATGGAGGAAGACGGTGGCGGGGGCGTCGAAGATGTTCGTGGAGAGGCACCGCACCAACCACGTGCTGCTCATCAGCGACATGGTCTGAGCTCTGA ACTCTAA ACTG AAGCCTCTGCCATGACAGGTGGCCGAGCTGTGACTGATTCTTCTCTCGTCATCGAGCTCTCCTGCTCGGGTTGGTTAATTGGTTTCCTTCGAATTGAATTCGTTTATGACTGATCGATTCTACAGTTTAGCTAGAATAAAATGG CAGAAAAGAACAACACAAAATTGAACTAGCTGTGTAGTTCAGGTAGAGTAGGTTCTTTGACTCCTGCCTCTGTGTTTGCTTTTATTCACTCGTTGTTTCTTTATACTCGGTTGAATCATCGTCTCGGCGACCACGTTGTAAATTCAAGTTTGCAATATCAATACCAGTGCTGTTCTTCTCAGAGAAAAAAAA  ]
[+] EMBL BI805579             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGCNTCGAAGATGTTCTTGGAGAGGCNCCGCACCAACCACGTGCTGCTCATCAGCGACATGGTCTGAGCTCTGATACTCTAAGACTGTAAGCCTCTGCCCTGACNGGTGGCCGAGCTGTGACTGATTCTTCTCTCGTCATCGAGCTCTCCTGCTCGGGTTGGTTAANTGGTTTCCTTCGAATTGAATTCGGTTATGACTGATCGATTCTACAGTTTAGCTAGAATAAAATGGCCAGAAAAGAACCACCCCAAATTGAACTAGCTGTGTAGTTCAGGTAGAGTAGGTTCTTTGACTCCTGCCTCTGTGTTTGCTTTTATTCACTCGTTGTTTCTTTATACTCGGTTGAATCATCGTCTCGGCGACCACGTTGTAAATTCAAGTTNGCCATATC ATACCAGGGCTGTTCTTCTCCAAAAAAANAAAGA]




>consensus_6954#0
TCCTCCCATTCACCAACGGATTCACTGTGTCAAACCTCCGATCTCTGCAATGGCAGCAAC
GGCGCAGGGCGGCGGCGGGGCGGTGTCCGTGCAGCACGTGGCGAGGGCGTCGTCGGACGA
GCTCCTGCGCAAGTTCGCCGACCCGGACGCGCACGCCAAGCAGATCACGCCGCCGCGGCG
CAGCCTCGCGCTGCGGCGGAAGCGGTCGTCCAGGAGGGTGGCGTCGGGGCTCTCCGCGAG
GGATTTGGAGTCGGGGGCGGAGCTCGCGGCGCCCAAGCGGAGGCGGAGCATCGGCGGGTC
CACCGAGTGGAAGGCCGGGCTGCTGCTGCCGACGACCACCACGGCCTCCGCCCGCAAGGG
ATCCGCCGCGAGCCACTCCCACCGGGGCGGGGCCGCGCGCCTCGATGACGCCGCCGGGAT
CGGCCTCCTCCTCGCCGCGTTGGAGCGGACATGGAGGAAGACGGTGGCGGGGGCGTCGAA
GATGTTCGTGGAGAGGCACCGCACCAACCACGTGCTGCTCATCAGCGACATGGTCTGAGC
TCTGAACTCTAAACTGAAGCCTCTGCCATGACAGGTGGCCGAGCTGTGACTGATTCTTCT
CTCGTCATCGAGCTCTCCTGCTCGGGTTGGTTAATTGGTTTCCTTCGAATTGAATTCGTT
TATGACTGATCGATTCTACAGTTTAGCTAGAATAAAATGGCAGAAAAGAACAACACAAAA
TTGAACTAGCTGTGTAGTTCAGGTAGAGTAGGTTCTTTGACTCCTGCCTCTGTGTTTGCT
TTTATTCACTCGTTGTTTCTTTATACTCGGTTGAATCATCGTCTCGGCGACCACGTTGTA
AATTCAAGTTTGCAATATCAATACCAGTGCTGTTCTTCTCAGAGAAAAAAAAGA
clustalw multiple alignements is not computed in this case