These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6978#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2712 fasta sequence [CCGTCTTGCAACTAGCTCCGGTCCAAAACCGCACTTGTGTGCACGACGGCTACTCACTCTCGCAGTGGCGTGTTAGCATAGCACCGCTCGCTCGTTGCTCGCGCGCGCCGGGAATCCTAGCAATGGCCTCCTCCTCCCCGCTCTGCTGCTACCTGCTGCTCTTCGTCGTCGTCGTGGTGCTCACGGGCAGCTGCCGTGCCAGGGACACAGTCGTGCCCGGCCGCCCGCTCGCCGCGAACGAGACGCTGGTCTCGGGCGGCGACGCCAACTTCGTGCTCGGCTTCTTCACCCGGCCGGGCGCCAACAGCACCTACGTCGGCGTCTGGTACAACAAGGTCTCGGTCCGCACCGTCGTCTGGGTCGCCAACCGCGAGGACCCGCTCCCCGGCGACGTCGCGGACAACCCCGACGCCACGCTCTCCGTGTCGCCCACGGGCACGCTCGCCATTGTAGCGGGGAACTCGACCGTTGTGTGGTCGGTCACGCCGGCGGCCAAGCTGGCGAGCCCCACGGCCCGGATCATGGACAGCGGAAACCTGGTGATCGCGGACGGCGCTGGCGGTGGCGTGGCGTGGCAGGGGTTCGACTACCCGACCGACACGCTGCTCCCGGAGATGAGGCTGGGCGTCGACTACGTGAAGGGGAGGAACAGGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCCTCGCCGGGCCCCGTCGTGATGGCCATGGACACGTCCGGCGACCCCCAGGTGTTCATCTGGAACGGCGCCGAGAAGGTCTGGCGCTCCGGCCCCTGGGACGGCGTCCAGTTCACCGGCGTCCCGGACACCGTCACCTACTCCGGCTTCACCTTCAGCTTCATCAACAACGCCAAGGAAGTCACGTACAGCTTCCAGGTGCACAACGTGTCGATCATATCGAGGCTGGGGCTGAACAGCACGGGGAGCTACGGGCTGCTGCAGCGGTCGACGTGGGTGGAGGCGGCGGGGACGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGAGGTGTCCCCGTGCGGGGCCAACGGCGTGTGCGACACAAACAACCTGCCCGTCTGCTCCTGCCTCCGCGGCTTCACGCCCAAGTCGCCCGAGGCGTGGGCGCTGCGTGACGGCCGCGCGGGGTGCGTGCGGTCGACGCCGCTCGACTGCCAGAACGGCACCGACGGGTTCGTCGCCGTGGAGCACGCCAAGGTGCCCGACACGGAGCGGAGCGTCGTGGACCTGGGCCTCAGCCTGGAGCAGTGCCGGAAGGCGTGCCTCATGAACTGCTCCTGCACGGCGTACGCGAGCGCCAACGTGAGCGGTGGCGGCCGCGGCCACGGCGCCGGCACCGGCTGCGTCATGTGGACGACCGGGCTCACCGACCTGCGCGTGTACCCGGAGTTCGGCCAGGACCTCTTCGTCCGCCTCGCCGCCGCAGATCTCGGTTTAACAAGCAAATCTAACAAGGCACGTGTAATAATCGCCATCGTTGTCAGCATCTCATCGGTGACGTTTCTGTCAGTTCTCGCTGGTTTTCTCGTCTGGACAAGAAAGAAGAAGAGAGCAAGAAAAACCGGATCAAGCAAATGGAGCGGTGGTTCCCGCAGTACTGGTCGCCGCTATGAAGGAAGCAGTCATCACGATGATGATCTGGAACTTCCAATCTTTGATCTGGGGACAATTGCAGCTGCTACTGATGGTTTCTCAATCAACAACAAGCTCGGTGAGGGTGGCTTCGGACCAGTATACAAGGGTAAGCTCGAGGATGGACAAGAAATAGCAGTTAAAACGTTGTCCAAAACATCCGTACAGGGTCTCGACGAATTCAAGAATGAGGTAATGTTGATAGCTAAACTTCAGCATAGGAATCTTGTTCGGCTTCTCGGCTTCAGCATTAGTGGACAAGAAAGGATACTTGTGTACGAATACATGGCAAACAAGAGCCTAGACTACTTTCTGTTCGCGCGATACCGTATAATAGAAGGCATTACTAGAGGTTTACTATATCTTCACCAGGATTCAAGATACAGAATCATCCACAGAGACCTGAAGGCAAGTAATGTTCTTCTTGACAAGGAGATGACTCCCAAAATTTCTGACTTTGGCATGGCAAGAATGTTTGGAAGTGAAGAGACAGAAATCAATACCAGAAAAGTGGTCGGCACATATGGCTATATGTCTCCAGAATATGCAATGGACGGAGTCTTTTCTGTCAAATCAGATGTATTTAGTTTTGGAGTTTTACTACTGGAAATAATTAGTGGCAGGAGGAACAGAGGGGTTTATTCATATTCAAACCACCTAAATCTTCTGGGACATGCATGGAGCTTATGGAATGAAGGAAAAAGCTTGGAGTTAGCAGATGAAACAATGAATGGCTCGTTCGACTCAGATGAAGTACTCAAATGCATCAGAGTGGGACTCCTATGTGTGCAAGAGAACCCAGATGACCGTCCATTGATGTCTCAGGTGCTTCTGATGTTAGCTACGACAGATGCTACCACATTGCCAACTCCTAAACAGCCTGGCTTTGCAGCTAGAAGAATTCTAATGGAAACAGACACATCATCAAGCAAGCCAGACTGCAGCATATTCGACAGTGCAACAGTTACTATACTTGAAGGTCGATAGGATGTTAATGTGCTAATTGAACTTACTAGGGGAATGTGCATTACATAATGTGCTTTCTTCATCACCGTGTGTTTGAGCAACA] [+] EMBL AY327041 [CCGTCTTGCAACTAGCTCCGGTCCAAAACCGCACTTGTGTGCACGACGGCTACTCACTCTCGCAGTGGCGTGTTAGCATAGCACCGCTCGCTCGTTGCTCGCGCGCGCCGGGAATCCTAGCAATGGCCTCCTCCTCCCCGCTCTGCTGCTACCTGCTGCTCTTCGTCGTCGTCGTGGTGCTCACGGGCAGCTGCCGTGCCAGGGACACAGTCGTGCCCGGCCGCCCGCTCGCCGCGAACGAGACGCTGGTCTCGGGCGGCGACGCCAACTTCGTGCTCGGCTTCTTCACCCGGCCGGGCGCCAACAGCACCTACGTCGGCGTCTGGTACAACAAGGTCTCGGTCCGCACCGTCGTCTGGGTCGCCAACCGCGAGGACCCGCTCCCCGGCGACGTCGCGGACAACCCCGACGCCACGCTCTCCGTGTCGCCCACGGGCACGCTCGCCATTGTAGCGGGGAACTCGACCGTTGTGTGGTCGGTCACGCCGGCGGCCAAGCTGGCGAGCCCCACGGCCCGGATCATGGACAGCGGAAACCTGGTGATCGCGGACGGCGCTGGCGGTGGCGTGGCGTGGCAGGGGTTCGACTACCCGACCGACACGCTGCTCCCGGAGATGAGGCTGGGCGTCGACTACGTGAAGGGGAGGAACAGGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCCTCGCCGGGCCCCGTCGTGATGGCCATGGACACGTCCGGCGACCCCCAGGTGTTCATCTGGAACGGCGCCGAGAAGGTCTGGCGCTCCGGCCCCTGGGACGGCGTCCAGTTCACCGGCGTCCCGGACACCGTCACCTACTCCGGCTTCACCTTCAGCTTCATCAACAACGCCAAGGAAGTCACGTACAGCTTCCAGGTGCACAACGTGTCGATCATATCGAGGCTGGGGCTGAACAGCACGGGGAGCTACGGGCTGCTGCAGCGGTCGACGTGGGTGGAGGCGGCGGGGACGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGAGGTGTCCCCGTGCGGGGCCAACGGCGTGTGCGACACAAACAACCTGCCCGTCTGCTCCTGCCTCCGCGGCTTCACGCCCAAGTCGCCCGAGGCGTGGGCGCTGCGTGACGGCCGCGCGGGGTGCGTGCGGTCGACGCCGCTCGACTGCCAGAACGGCACCGACGGGTTCGTCGCCGTGGAGCACGCCAAGGTGCCCGACACGGAGCGGAGCGTCGTGGACCTGGGCCTCAGCCTGGAGCAGTGCCGGAAGGCGTGCCTCATGAACTGCTCCTGCACGGCGTACGCGAGCGCCAACGTGAGCGGTGGCGGCCGCGGCCACGGCGCCGGCACCGGCTGCGTCATGTGGACGACCGGGCTCACCGACCTGCGCGTGTACCCGGAGTTCGGCCAGGACCTCTTCGTCCGCCTCGCCGCCGCAGATCTCGGTTTAACAAGCAAATCTAACAAGGCACGTGTAATAATCGCCATCGTTGTCAGCATCTCATCGGTGACGTTTCTGTCAGTTCTCGCTGGTTTTCTCGTCTGGACAAGAAAGAAGAAGAGAGCAAGAAAAACCGGATCAAGCAAATGGAGCGGTGGTTCCCGCAGTACTGGTCGCCGCTATGAAGGAAGCAGTCATCACGATGATGATCTGGAACTTCCAATCTTTGATCTGGGGACAATTGCAGCTGCTACTGATGGTTTCTCAATCAACAACAAGCTCGGTGAGGGTGGCTTCGGACCAGTATACAAGGGTAAGCTCGAGGATGGACAAGAAATAGCAGTTAAAACGTTGTCCAAAACATCCGTACAGGGTCTCGACGAATTCAAGAATGAGGTAATGTTGATAGCTAAACTTCAGCATAGGAATCTTGTTCGGCTTCTCGGCTTCAGCATTAGTGGACAAGAAAGGATACTTGTGTACGAATACATGGCAAACAAGAGCCTAGACTACTTTCTGTTCGCGCGATACCGTATAATAGAAGGCATTACTAGAGGTTTACTATATCTTCACCAGGATTCAAGATACAGAATCATCCACAGAGACCTGAAGGCAAGTAATGTTCTTCTTGACAAGGAGATGACTCCCAAAATTTCTGACTTTGGCATGGCAAGAATGTTTGGAAGTGAAGAGACAGAAATCAATACCAGAAAAGTGGTCGGCACATATGGCTATATGTCTCCAGAATATGCAATGGACGGAGTCTTTTCTGTCAAATCAGATGTATTTAGTTTTGGAGTTTTACTACTGGAAATAATTAGTGGCAGGAGGAACAGAGGGGTTTATTCATATTCAAACCACCTAAATCTTCTGGGACATGCATGGAGCTTATGGAATGAAGGAAAAAGCTTGGAGTTAGCAGATGAAACAATGAATGGCTCGTTCGACTCAGATGAAGTACTCAAATGCATCAGAGTGGGACTCCTATGTGTGCAAGAGAACCCAGATGACCGTCCATTGATGTCTCAGGTGCTTCTGATGTTAGCTACGACAGATGCTACCACATTGCCAACTCCTAAACAGCCTGGCTTTGCAGCTAGAAGAATTCTAATGGAAACAGACACATCATCAAGCAAGCCAGACTGCAGCATATTCGACAGTGCAACAGTTACTATACTTGAAGGTCGATAGGATGTTAATGTGCTAATTGAACTTACTAGGGGAATGTGCATTACATAATGTGCTTTCTTCATCACCGTGTGTTTGAGCAACA] consensusID : consensus_6978#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2705 fasta sequence [ACTCGCGCGCACCGCGACGAATCGACCATATGGCCATCCATCAGCTCAGCTTCGTGCTCCTCCTCATGCTGCACGCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCACGACACGCTCGTCTCTGCCGGCGCCGGCGACAGCGGCGGCTTCGCGCTCGGGTTCTTCACCCCGCCGGGATCCAACGACACCTACGTCGGGGTGTGGTACGCGCGGGTGTCCCCCCGCACCGTCGTCTGGGTCGCCAACCGCGCCGACCCCGTCCCGGGCCCCGTCGACGGCAACGCCGGCGCCACGTTGTCCGTGTCCCGCGCCTGCGAGCTCGCCGTCGCCGACGCCAACTCCACCGTCGTGTGGTCGGTCACGCCGGCGACGACAGGGCCCTGCACGGCGAGGATACGGGACGACGGCAACCTGGTCGTCACCGACGAGCGCGGCCGGGTGGCGTGGCAGGGGTTCGACCACCCCACCGACACGCTGCTCCCCGGGATGAGGATTGGGGTGGACTTCGCCGCCGGCAACAACATGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCGTCGCCGAGCTCTGTGGTCGTGGCCATGGACACCTCCGGCGATCCGGAGGTGTTCCTCTGGAACGGGCCGAACAAGGTGTGGCGCTCCGGCCCCTGGGACGGCATGCAGTTCACCGGCGTCCCGGACACCATCACCTACAAGAACTTCAGCTTCAGCTTCGTGAACAGCGCCCGGGAGGTCACCTACAGCTTCCAGGTGCCCGACGCGAGCATCATGTCGCGGCTGGTGCTGAACAGCAGCGGCGGCGGGCTGGTGCAGCGGTGGACGTGGGTGGAGGCGGCGGGGGCGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGCCGTGTCGCCGTGCGGCGCCAACGGGGTGTGCGACACCAACAGCCTCCCCGTGTGCTCCTGCCTCCGCGGGTTCGCGCCGCGGTCGCCGGCGGCGTGGGCGCTGCGGGACGGCCGCGACGGGTGCGCGCGGGAGACGCCGCTCGGTTGCGCCAACGGCACCGACGGGTTCGCCGTGGTGCGGCACGCCAAGGCGCCCGACACGACCGCCGCGACGGTGGACTACGACGCCGGCCTCCAGCTGTGCCGGCGGAGGTGCCTGGGCAACTGCTCGTGCACGGCGTACGCCAACGCCAACCTCAGCGCGCCGCCCGGGCGCCGCGGCTGCGTCATGTGGACCGGCGAGCTGGAAGACCTTCGAGTGTACCCGGCCTTCGGCCAGGACCTCTACGTCCGCCTCGCCGCCGCCGATCTCGATTCAACAAGCAAGTCTAAGAAGAAGACGCACATTATAATTGCAGTAGTTGTCAGCATCTGTGCGCTGGCAACTATTTTAGCCCTTACTGGGATGTACATTTGGAGAACAAAGAAGACAAAAGCAAGGCGACAAGGACCAAGTAACTGGAGTGGTGGTTTACACAGTAGAGAGCTCCACAGTGAAGGAAATAGCCATGGGGATGACCTGGATCTGCCTCTATTTGGTTTGGAGACAATAGCATCAGCCACAAATGGTTTCTCAGCAGACAACAAACTTGGAGAAGGTGGCTTTGGGCCAGTATACAAGGGTACACTAGAGGATGGGCAAGAAATAGCAGTTAAAACACTTTCAAAGACGTCAGTACAGGGTCTTGATGAGTTCAGGAATGAGGTTATGTTGATAGCTAAACTCCAGCATCGAAATCTTGTTCAACTTATTGGCTACAGCGTTTGTGGACAAGAAAAGATGCTTCTATACGAATTTATGGAAAACAAAAGCCTGGACTGTTTCCTGTTTGACAAATCCAAGAGCAAGCTACTTGACTGGCAAACAAGATACCACATAATCGAGGGGATTGCCCGAGGTTTGCTGTATCTTCACCAGGACTCAAGATATAGAATCATCCACAGAGACCTGAAGACAAGCAACATTCTTCTGGATAAGGAGATGACTCCTAAAATTTCAGACTTTGGTATGGCAAGAATGTTTGGCAGTGACGACACGGAAATAAATACAGTTAGAGTGGTTGGCACATACGGCTATATGGCCCCCGAGTACGCAATGGATGGAGTATTTTCAGTGAAATCAGATGTACTTAGTTTCGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGCTACTCCAGCCACCTAAACCTTCTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGATCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTTAAAGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCTCCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGTCGCAAGAAGAGCTGCAACGGAGGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGTGGACAGCATGACCATCACCATGATCGAGGGCAGGTAGGAATATAGGATCGGAGTCGGAGCGCGACATTGTACTGAAGATTACTAGAACGCCTTTGCCTTTGCATTTTACTAGGTATTCTGTGTAGAATCATATATAGTCTTGTGATTGATTAACCCTAGCACTGAGTTGCGAATTCAATCCCACCCAAATAACCAGAAA] [+] EMBL AK110116 [ACTCGCGCGCACCGCGACGAATCGACCATATGGCCATCCATCAGCTCAGCTTCGTGCTCCTCCTCATGCTGCACGCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCACGACACGCTCGTCTCTGCCGGCGCCGGCGACAGCGGCGGCTTCGCGCTCGGGTTCTTCACCCCGCCGGGATCCAACGACACCTACGTCGGGGTGTGGTACGCGCGGGTGTCCCCCCGCACCGTCGTCTGGGTCGCCAACCGCGCCGACCCCGTCCCGGGCCCCGTCGACGGCAACGCCGGCGCCACGTTGTCCGTGTCCCGCGCCTGCGAGCTCGCCGTCGCCGACGCCAACTCCACCGTCGTGTGGTCGGTCACGCCGGCGACGACAGGGCCCTGCACGGCGAGGATACGGGACGACGGCAACCTGGTCGTCACCGACGAGCGCGGCCGGGTGGCGTGGCAGGGGTTCGACCACCCCACCGACACGCTGCTCCCCGGGATGAGGATTGGGGTGGACTTCGCCGCCGGCAACAACATGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCGTCGCCGAGCTCTGTGGTCGTGGCCATGGACACCTCCGGCGATCCGGAGGTGTTCCTCTGGAACGGGCCGAACAAGGTGTGGCGCTCCGGCCCCTGGGACGGCATGCAGTTCACCGGCGTCCCGGACACCATCACCTACAAGAACTTCAGCTTCAGCTTCGTGAACAGCGCCCGGGAGGTCACCTACAGCTTCCAGGTGCCCGACGCGAGCATCATGTCGCGGCTGGTGCTGAACAGCAGCGGCGGCGGGCTGGTGCAGCGGTGGACGTGGGTGGAGGCGGCGGGGGCGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGCCGTGTCGCCGTGCGGCGCCAACGGGGTGTGCGACACCAACAGCCTCCCCGTGTGCTCCTGCCTCCGCGGGTTCGCGCCGCGGTCGCCGGCGGCGTGGGCGCTGCGGGACGGCCGCGACGGGTGCGCGCGGGAGACGCCGCTCGGTTGCGCCAACGGCACCGACGGGTTCGCCGTGGTGCGGCACGCCAAGGCGCCCGACACGACCGCCGCGACGGTGGACTACGACGCCGGCCTCCAGCTGTGCCGGCGGAGGTGCCTGGGCAACTGCTCGTGCACGGCGTACGCCAACGCCAACCTCAGCGCGCCGCCCGGGCGCCGCGGCTGCGTCATGTGGACCGGCGAGCTGGAAGACCTTCGAGTGTACCCGGCCTTCGGCCAGGACCTCTACGTCCGCCTCGCCGCCGCCGATCTCGATTCAACAAGCAAGTCTAAGAAGAAGACGCACATTATAATTGCAGTAGTTGTCAGCATCTGTGCGCTGGCAACTATTTTAGCCCTTACTGGGATGTACATTTGGAGAACAAAGAAGACAAAAGCAAGGCGACAAGGACCAAGTAACTGGAGTGGTGGTTTACACAGTAGAGAGCTCCACAGTGAAGGAAATAGCCATGGGGATGACCTGGATCTGCCTCTATTTGGTTTGGAGACAATAGCATCAGCCACAAATGGTTTCTCAGCAGACAACAAACTTGGAGAAGGTGGCTTTGGGCCAGTATACAAGGGTACACTAGAGGATGGGCAAGAAATAGCAGTTAAAACACTTTCAAAGACGTCAGTACAGGGTCTTGATGAGTTCAGGAATGAGGTTATGTTGATAGCTAAACTCCAGCATCGAAATCTTGTTCAACTTATTGGCTACAGCGTTTGTGGACAAGAAAAGATGCTTCTATACGAATTTATGGAAAACAAAAGCCTGGACTGTTTCCTGTTTGACAAATCCAAGAGCAAGCTACTTGACTGGCAAACAAGATACCACATAATCGAGGGGATTGCCCGAGGTTTGCTGTATCTTCACCAGGACTCAAGATATAGAATCATCCACAGAGACCTGAAGACAAGCAACATTCTTCTGGATAAGGAGATGACTCCTAAAATTTCAGACTTTGGTATGGCAAGAATGTTTGGCAGTGACGACACGGAAATAAATACAGTTAGAGTGGTTGGCACATACGGCTATATGGCCCCCGAGTACGCAATGGATGGAGTATTTTCAGTGAAATCAGATGTACTTAGTTTCGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGCTACTCCAGCCACCTAAACCTTCTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGATCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTTAAAGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCTCCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGTCGCAAGAAGAGCTGCAACGGAGGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGTGGACAGCATGACCATCACCATGATCGAGGGCAGGTAGGAATATAGGATCGGAGTCGGAGCGCGACATTGTACTGAAGATTACTAGAACGCCTTTGCCTTTGCATTTTACTAGGTATTCTGTGTAGAATCATATATAGTCTTGTGATTGATTAACCCTAGCACTGAGTTGCGAATTCAATCCCACCCAAATAACCAGAAA] [+] EMBL CB636103 [ ATCGACCATATGGCCATCCATCAGCTCAGCTTCGTGCTCCTCCTCATGCTGCTCGCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCACGACACGCTCGTCTCTGCCGGCGCCGGCGACGGCGGCGGCTTCGCGCTCGGGTTCTTCACCCCGCCGGGATCCAACGACACCTACGTCGGGGTGTGG ] [-] EMBL CB636104 [ GTATTTTCAGTGAAATCAGATGTATTCAGTTTCGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGTTACTCCAGCCACCTAAACCTTTTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGATCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTCAAAGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCTCCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGTCGCAAGAAGAGCTGCAACGGAGGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGTGGACAGCATGACCATCACCATGATCGAGGGCAGGTAGGAATATAGGATCGGAGTCGGAGCGCGACATTGTACTGAAGATTACTAGAACGCCTTTGCCTTTGCATTTTACTAGGTATTCTGTG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_6978#0 CCGTCTTGCAACTAGCTCCGGTCCAAAACCGCACTTGTGTGCACGACGGCTACTCACTCT 60 consensus_6978#1 ------------------------------------------------------------ consensus_6978#0 CGCAGTGGCGTGTTAGCATAGCACCGCTCGCTCGTTGCTCGCGCGCGCCGGGAATCCTAG 120 consensus_6978#1 ------------------------------------ACTCGCGCGCACCGCGAC-----G 19 ********* *** ** * consensus_6978#0 CAATGGCCTCCTCCTCCCCGCTCTGCTGCTACCTGCTGCTCTTCGTCGTCGTCGTGGTGC 180 consensus_6978#1 AATCGACCATATGGCCATCCATCAGCT-CAGCTTCGTGCTCCTCCTCAT----GCTGCAC 74 * * ** * * * ** *** * * * ***** ** ** * * * * consensus_6978#0 TCACGGGCAGCTGC-CGTGCCAGGGACACAGTCGTGCCCGGCCGCCCGCTCGCCGCGAAC 239 consensus_6978#1 GCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCAC 134 * * *** * * ****** * **** *** *** *** ******** * ** consensus_6978#0 GAGACGCTGGTCTCGGGCGGCGACGCCAAC---------TTCGTGCTCGGCTTCTTCACC 290 consensus_6978#1 GACACGCTCGTCTCTGCCGGCGCCGGCGACAGCGGCGGCTTCGCGCTCGGGTTCTTCACC 194 ** ***** ***** * ***** ** * ** **** ****** ********* consensus_6978#0 CGGCCGGGCGCCAACAGCACCTACGTCGGCGTCTGGTACAACAAGGTCTCGGTCCGCACC 350 consensus_6978#1 CCGCCGGGATCCAACGACACCTACGTCGGGGTGTGGTACGCGCGGGTGTCCCCCCGCACC 254 * ****** ***** ************ ** ****** *** ** ******* consensus_6978#0 GTCGTCTGGGTCGCCAACCGCGAGGACCCGCTCCCCGGCGACGTCGCGGACAACCCCGAC 410 consensus_6978#1 GTCGTCTGGGTCGCCAACCGCGCCGACCCCGTCCCGGGCCCCGTCGACGGCAACGCCGGC 314 ********************** ***** **** *** ***** * **** *** * consensus_6978#0 GCCACGCTCTCCGTGTCGCCCACGGGCACGCTCGCCATTGTAGCGGGGAACTCGACCGTT 470 consensus_6978#1 GCCACGTTGTCCGTGTCCCGCGCCTGCGAGCTCGCCGTCGCCGACGCCAACTCCACCGTC 374 ****** * ******** * * * ** ******* * * * * ***** ***** consensus_6978#0 GTGTGGTCGGTCACGCCGGCGGCCAAGCTGGCGAGCCCCACGGCCCGGATCATGGACAGC 530 consensus_6978#1 GTGTGGTCGGTCACGCCGGCGAC---GACAGGGCCCTGCACGGCGAGGATACGGGACGAC 431 ********************* * * * * * ****** **** **** * consensus_6978#0 GGAAACCTGGTGATCGCGGACGGCGCTGGCGGTGGCGTGGCGTGGCAGGGGTTCGACTAC 590 consensus_6978#1 GGCAACCTGGTCGTCACCGACGA-GC--GCGGCCGGGTGGCGTGGCAGGGGTTCGACCAC 488 ** ******** ** * **** ** **** * ********************* ** consensus_6978#0 CCGACCGACACGCTGCTCCCGGAGATGAGGCTGGGCGTCGACTACGTGAAGGGGAGGAAC 650 consensus_6978#1 CCCACCGACACGCTGCTCCCCGGGATGAGGATTGGGGTGGACTTCGCCGCCGGCAACAAC 548 ** ***************** * ******* * ** ** **** ** ** * *** consensus_6978#0 AGGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCCTCGCCGGGCCCCGTCGTGATGGCC 710 consensus_6978#1 ATGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCGTCGCCGAGCTCTGTGGTCGTGGCC 608 * ********************************* ****** ** * ** ** ***** consensus_6978#0 ATGGACACGTCCGGCGACCCCCAGGTGTTCATCTGGAACGGCGCCGAGAAGGTCTGGCGC 770 consensus_6978#1 ATGGACACCTCCGGCGATCCGGAGGTGTTCCTCTGGAACGGGCCGAACAAGGTGTGGCGC 668 ******** ******** ** ******** ********** * * ***** ****** consensus_6978#0 TCCGGCCCCTGGGACGGCGTCCAGTTCACCGGCGTCCCGGACACCGTCACCTACTCCGGC 830 consensus_6978#1 TCCGGCCCCTGGGACGGCATGCAGTTCACCGGCGTCCCGGACACCATCACCTACAAGAAC 728 ****************** * ************************ ******** * consensus_6978#0 TTCACCTTCAGCTTCATCAACAACGCCAAGGAAGTCACGTACAGCTTCCAGGTGCACAAC 890 consensus_6978#1 TTCAGCTTCAGCTTCGTGAACAGCGCCCGGGAGGTCACCTACAGCTTCCAGGTGCCCGAC 788 **** ********** * **** **** *** ***** **************** * ** consensus_6978#0 GTGTCGATCATATCGAGGCTGGGGCTGAACAGCACGGGGAGCTACGGGCTGCTGCAGCGG 950 consensus_6978#1 GCGAGCATCATGTCGCGGCTGGTGCTGAACAGCA---GCGGCGGCGGGCTGGTGCAGCGG 845 * * ***** *** ****** *********** * ** ******* ******** consensus_6978#0 TCGACGTGGGTGGAGGCGGCGGGGACGTGGAACCTGTACTGGTACGCGCCCAAGGACCAG 1010 consensus_6978#1 TGGACGTGGGTGGAGGCGGCGGGGGCGTGGAACCTGTACTGGTACGCGCCCAAGGACCAG 905 * ********************** *********************************** consensus_6978#0 TGCGACGAGGTGTCCCCGTGCGGGGCCAACGGCGTGTGCGACACAAACAACCTGCCCGTC 1070 consensus_6978#1 TGCGACGCCGTGTCGCCGTGCGGCGCCAACGGGGTGTGCGACACCAACAGCCTCCCCGTG 965 ******* ***** ******** ******** *********** **** *** ***** consensus_6978#0 TGCTCCTGCCTCCGCGGCTTCACGCCCAAGTCGCCCGAGGCGTGGGCGCTGCGTGACGGC 1130 consensus_6978#1 TGCTCCTGCCTCCGCGGGTTCGCGCCGCGGTCGCCGGCGGCGTGGGCGCTGCGGGACGGC 1025 ***************** *** **** ****** * *************** ****** consensus_6978#0 CGCGCGGGGTGCGTGCGGTCGACGCCGCTCGACTGCCAGAACGGCACCGACGGGTTCGTC 1190 consensus_6978#1 CGCGACGGGTGCGCGCGGGAGACGCCGCTCGGTTGCGCCAACGGCACCGACGGGTTCGCC 1085 **** ******* **** *********** *** ******************* * consensus_6978#0 GCCGTGGAGCACGCCAAGGTGCCCGACACGGAGCGGAGCGTCG-TGGACCTGGGCCTCAG 1249 consensus_6978#1 GTGGTGCGGCACGCCAAGGCGCCCGACACG-ACCGCCGCGACGGTGGACTACGACGCCGG 1144 * *** *********** ********** * ** *** ** ***** * * * * consensus_6978#0 CCTGGAGCAGTGCCGGAAGGCGTGCCTCATGAACTGCTCCTGCACGGCGTACGCGAGCGC 1309 consensus_6978#1 CCTCCAGCTGTGCCGGCGGAGGTGCCTGGGCAACTGCTCGTGCACGGCGTACGCCAACGC 1204 *** *** ******* * ****** ******** ************** * *** consensus_6978#0 CAACGTGAGCGGTGGCGGCCGCGGCCACGGCGCCGGCACCGGCTGCGTCATGTGGACGAC 1369 consensus_6978#1 CAACCTCAGCG--------CGCCGCCCGGGCGCCG----CGGCTGCGTCATGTGGACCGG 1252 **** * **** *** *** ******* ****************** consensus_6978#0 CGGGCTCACCGACCTGCGCGTGTACCCGGAGTTCGGCCAGGACCTCTTCGTCCGCCTCGC 1429 consensus_6978#1 CGAGCTGGAAGACCTTCGAGTGTACCCGGCCTTCGGCCAGGACCTCTACGTCCGCCTCGC 1312 ** *** ***** ** ********** **************** ************ consensus_6978#0 CGCCGCAGATCTCGGTTTAACAAGCAAATCTAACAAGG---CACGTGTAATAATCGCCAT 1486 consensus_6978#1 CGCCGCCGATCTCGATTCAACAAGCAAGTCTAAGAAGAAGACGCACATTATAATTGCAGT 1372 ****** ******* ** ********* ***** *** * * * ***** ** * consensus_6978#0 CGTTGTCAGCATCTCATCGGTGACGTTTCTGTCAGTTCTCGCTGGTTTTCTCGTCTGGAC 1546 consensus_6978#1 AGTTGTCAGCATCTGTGCGCTGGCAACTATTTTAGCCCTTACTGGGATGTACATTTGGAG 1432 ************* ** ** * * * * ** ** **** * * * **** consensus_6978#0 AAGAAAGAAGAAGAGAGCAAGAAAAACCGGATCAAGCAAATGGAGCGGTGGTTCCCGCAG 1606 consensus_6978#1 AACAAAGAAGACAAAAGCAAGGCGACAAGGACCAAGTAACTGGAGTGGTGGTTTACACAG 1492 ** ******** * ****** * *** **** ** ***** ******* * *** consensus_6978#0 TACTGGTCGCCGCTATGAAGGAAGCAGTCATCACGATGATGATCTGGAACTTCCAATCTT 1666 consensus_6978#1 TAGAGAGCTCCACAGTGAAGGAAATAGCCAT---GGGGATGACCTGGATCTGCCTCTATT 1549 ** * * ** * ******** ** *** * ***** ***** ** ** * ** consensus_6978#0 TGATCTGGGGACAATTGCAGCTGCTACTGATGGTTTCTCAATCAACAACAAGCTCGGTGA 1726 consensus_6978#1 TGGTTTGGAGACAATAGCATCAGCCACAAATGGTTTCTCAGCAGACAACAAACTTGGAGA 1609 ** * *** ****** *** * ** ** *********** ******* ** ** ** consensus_6978#0 GGGTGGCTTCGGACCAGTATACAAGGGTAAGCTCGAGGATGGACAAGAAATAGCAGTTAA 1786 consensus_6978#1 AGGTGGCTTTGGGCCAGTATACAAGGGTACACTAGAGGATGGGCAAGAAATAGCAGTTAA 1669 ******** ** **************** ** ******** ***************** consensus_6978#0 AACGTTGTCCAAAACATCCGTACAGGGTCTCGACGAATTCAAGAATGAGGTAATGTTGAT 1846 consensus_6978#1 AACACTTTCAAAGACGTCAGTACAGGGTCTTGATGAGTTCAGGAATGAGGTTATGTTGAT 1729 *** * ** ** ** ** *********** ** ** **** ********* ******** consensus_6978#0 AGCTAAACTTCAGCATAGGAATCTTGTTCGGCTTCTCGGCTTCAGCATTAGTGGACAAGA 1906 consensus_6978#1 AGCTAAACTCCAGCATCGAAATCTTGTTCAACTTATTGGCTACAGCGTTTGTGGACAAGA 1789 ********* ****** * ********** *** * **** **** ** ********** consensus_6978#0 AAGGATACTTGTGTACGAATACATGGCAAACAAGAGCCTAGACTACTTTCTGTTCG---- 1962 consensus_6978#1 AAAGATGCTTCTATACGAATTTATGGAAAACAAAAGCCTGGACTGTTTCCTGTTTGACAA 1849 ** *** *** * ******* **** ****** ***** **** ** ***** * consensus_6978#0 -----------------------------CGCGATACCGTATAATAGAAGGCATTACTAG 1993 consensus_6978#1 ATCCAAGAGCAAGCTACTTGACTGGCAAACAAGATACCACATAATCGAGGGGATTGCCCG 1909 * ****** ***** ** ** *** * * consensus_6978#0 AGGTTTACTATATCTTCACCAGGATTCAAGATACAGAATCATCCACAGAGACCTGAAGGC 2053 consensus_6978#1 AGGTTTGCTGTATCTTCACCAGGACTCAAGATATAGAATCATCCACAGAGACCTGAAGAC 1969 ****** ** ************** ******** ************************ * consensus_6978#0 AAGTAATGTTCTTCTTGACAAGGAGATGACTCCCAAAATTTCTGACTTTGGCATGGCAAG 2113 consensus_6978#1 AAGCAACATTCTTCTGGATAAGGAGATGACTCCTAAAATTTCAGACTTTGGTATGGCAAG 2029 *** ** ******* ** ************** ******** ******** ******** consensus_6978#0 AATGTTTGGAAGTGAAGAGACAGAAATCAATACCAGAAAAGTGGTCGGCACATATGGCTA 2173 consensus_6978#1 AATGTTTGGCAGTGACGACACGGAAATAAATACAGTTAGAGTGGTTGGCACATACGGCTA 2089 ********* ***** ** ** ***** ***** * ****** ******** ***** consensus_6978#0 TATGTCTCCAGAATATGCAATGGACGGAGTCTTTTCTGTCAAATCAGATGTATTTAGTTT 2233 consensus_6978#1 TATGGCCCCCGAGTACGCAATGGATGGAGTATTTTCAGTGAAATCAGATGTACTTAGTTT 2149 **** * ** ** ** ******** ***** ***** ** ************ ******* consensus_6978#0 TGGAGTTTTACTACTGGAAATAATTAGTGGCAGGAGGAACAGAGGGGTTTATTCATATTC 2293 consensus_6978#1 CGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGCTACTC 2209 ** ** ** * ** ***** *** *** * ******** ** ** ** ** ** consensus_6978#0 AAACCACCTAAATCTTCTGGGACATGCATGGAGCTTATGGAATGAAGGAAAAAGCTTGGA 2353 consensus_6978#1 CAGCCACCTAAACCTTCTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGA 2269 * ********* ***** * ** *********** ***** ****** ** *** * ** consensus_6978#0 GTTAGCAGATGAAACAATGAATGGCTCGTTCGACTCAGATGAAGTACTCAAATGCATCAG 2413 consensus_6978#1 TCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTTAA 2329 * * ** ***** **** ***** *** ** *** ***** ** ****** * * consensus_6978#0 AGTGGGACTCCTATGTGTGCAAGAGAACCCAGATGACCGTCCATTGATGTCTCAGGTGCT 2473 consensus_6978#1 AGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCT 2389 ****** *********** ** ******** ** ******** * ***** ******** consensus_6978#0 TCTGATGTTAGCTACGACAGATGCTACCACATTGCCAACTCCTAAACAGCCTGGCTTTGC 2533 consensus_6978#1 CCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGT 2449 ****** * ** * * ***** *** ******** *** * ******* ** * consensus_6978#0 AGCTAGAAGAATTCTAATGGAAACAGACACATCATCAAGCAAGCCAGACTGCAGCATATT 2593 consensus_6978#1 CGCAAGAAGAGCTGCAACGGA---GGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGT 2506 ** ****** * ** *** ***** ** ** **** ************ * * consensus_6978#0 CGACAGTGCAACAGTTACTATACTTGAAGGTCGATAGGATGTTAATGTGCTAATTGAA-C 2652 consensus_6978#1 GGACAGCATGACCATCACCATGATCGAGGGCAGGTAGGAATATAGGATCGGAGTCGGAGC 2566 ***** ** * ** ** * ** ** * ***** ** * * * * * * consensus_6978#0 TTACTAGGGGAATGTGCATTAC-ATAATGTGCTTTCTTCA-----TCACCGTGTGTT-TG 2705 consensus_6978#1 GCGACATTGTACTGAAGATTACTAGAACGCCTTTGCCTTTGCATTTTACTAGGTATTCTG 2626 * * * ** ***** * ** * ** * * * ** ** ** ** consensus_6978#0 AGCAACA----------------------------------------------------- 2712 consensus_6978#1 TGTAGAATCATATATAGTCTTGTGATTGATTAACCCTAGCACTGAGTTGCGAATTCAATC 2686 * * * consensus_6978#0 ------------------- consensus_6978#1 CCACCCAAATAACCAGAAA 2705 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||