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Oryza sativa
cluster # 6982 cluster # 6982       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6982#0 length = 2604 sequences # 3  
consensus_6982#1 length = 755 sequences # 1  

consensusID : consensus_6982#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2604
fasta sequence
                              [CCTCTTCTCCTCCAACCGCCCACCATCTCATCTCTCGCACGCACGCACGCACCCGCCATTGCTGATTGCACCTCCCCCCAACCCCACCTCCCCGATGGACGCCGTCGCGTTCCCGCCGCCGCCCGCCCCGTTCCTCGACGACGACCTCGATTTCGGCGACTTCGCCTTCGCCGATCCCCAGCCCGCCGCCGCCGCCGCCTTCGACGCCTTCGGCGCCTACGACGACGACTGGGGTGACTTCGTCGACAGCCGCCTCGGATCCTGGGAGAAGCCGCGGGGCCCGCTCCCCCTCTCCCTGTTCGGCGCCGACGAGGACGAGGAGGAGGAGGAGGGACCGGCCGAGCTGCCGCCGACGGCTGCGGATCAGCGGGGAGCGTCGCACGCGTCCTCCAATGGATCGAAGCCGGCTGATCTCAAGGACCTCATCGCCGGCCTCTATGGATCTCACCCGCAACCCTCCTCCACCGACGCCGCGGAGGTGGGTACACAGGAGGGGTCAGCGGTAGCGGCGGCGGAGGAGGAGGAGGAGGATGGTGACGGATTCGAAGATGATGGCTGGGAATTCAAGGCCGCGGCGCCTTCTTCTTCGTCGGATGCTGTACAGGATGGCGGCAGACAAGCCCATGGGGATCTTACTCAGGATGTACCAAAGTCAATGAGCAGCGACCAGGAGGGCTGGTCATTATTTACTAGTGTTAGCGAAAATTTGAACAATGTTCAAACTACAGATCATGTTGGAACTCGTGAGTCCGCTGGACAAAGTGTGAAGGCCTTTAGTTATTTTCCACCCAATAATGCAGCCATACTCGACCTGTACAAAGAAAGTGAACCGATTGATGCTGTCCACATTATGCAATGTTCTTCAGAAAGTGTGCAAAGCTCTTCTGATATGTTCTCTAATACTGAAATGAACTCTTCATTTGGAACAGATGAAAACCATTCAATTAAATCAGCAAGTGATAGGATTTTGATTGATTTCTACCATAAGCTGAGAGAAGAATCATTGACGGTAATATCCCAGTACAAGAAGGATCTTAAGGAAAGCCAGAAGAATTCTATGCTTTCTGATGAAAAGAATGAAGTGATGACAGAAACTGAAAGGGAGATTCAGGAAATTTGCAAGGAATTACAAGATTCTTCACTTGCGAAAGGTTTTTGCAAAGATGAACATCCTTCAAAGGATGTTTGCATTTCTGAGCTGCTTAACAGTGCCAAAGAGGATCATTTGAAGGATTTTGATAAAGAATACCATTTAACAGAAATAATAGCAATGGCACTGGAAGACATGAGTTCAGCTGTTAAACTCTATAAGCACAGCGTGTCAATCCTTCGTACCTTGGAAATAGCATCCAAAGAGGAGCAATGTGATTATGTCAGTGCATGGTACAGTATGCTTCTGTCCTGTGCCCAAGAATTGCAGCATGGTGCGATGATTTGGCAGGAATCTTGTCATGCAAATGTTGGCGAAACAGTAATTTCTCAAGGTGCTCATTACTTTATTGCTCTTGGGGAGATCTACAGAGTTGCACAGATCTTACATATATCCATGCTATCTTTCAAGCCTTGGGTTCTTGCAGATCCTGGAATGTTGAGTAAAATGTTGGTTTGTTGGAACAGCTGCGTTAATTCATGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAACTTACATGCACCTGTTGCTAAAGTTCTTCTCGAGTCTATCATCAATATTAATGACATTGAGGTGCCCAATCTTCAAAGCTTCCTTCCCAGTGACAAGATGGCATGTAAACTTACCCTCTTGCCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTT-GGGATGCCGATCACTACTTTGTTAAAGTTGC-AAATCTGTGGGCTAATCAGATATCTTCTGACCCTCCCCAGTTTTCAGTCTCTCGTGTTGCTTAAATTAGCAAGGAAATCAACAATTGTCCATCAAGCAACCTGTCAATGACGTGGGAACGGGATTGCCCCTTTTAAGAGAAAACTTGACTACTTATGATAGGACCATCGGAAGCTAAAGATTCTCCTGCACAACTGCTTCTGGAAGGTTAACAGTATTGGTCAATGATCATTCTTTTGTGCAAGTAGCATTTTGCACCATTTTTTACGTAGTGCTTGGCAACAGCACTAGTATGGGAAGCCAAAATGTTCCTTTAGCTACACATTCTGTTTAGACTGGACTGAAGTACAGCACATTGAAGTGTACAAACTGCGAAATCCAATGGGTGCATGCAATGCAGTAATAGACGTGTATAGATTGTAAGCTTAAATAATCGGTATAGAGGAGGGAGAGATGAGGCTGTATTGAGCTGATTACAAGCTATATAAATCAGCTGTTTGTTGTGACCTTTTCAGCAACGTCAGGTTTGTTCAGACATCATAGCCCATTTCAGCAAATGAGATCTGCAAATGATGTGGAATGTGTATGATTCTAGCTGACCCCAGTTGCTTTGTAATAAGTTAGTAAACCTGGAAGTCGCCGACCACAACAGGTTATCTGTTTTTGCTGTTTTAACATAGTTATTTTCTGTTTAAGTTCTTGTGTGGAAAACATGCCTGAATAGCAAGGAAGATTA]

[+] EMBL AK066122             [CCTCTTCTCCTCCAACCGCCCACCATCTCATCTCTCGCACGCACGCACGCACCCGCCATTGCTGATTGCACCTCCCCCCAACCCCACCTCCCCGATGGACGCCGTCGCGTTCCCGCCGCCGCCCGCCCCGTTCCTCGACGACGACCTCGATTTCGGCGACTTCGCCTTCGCCGATCCCCAGCCCGCCGCCGCCGCCGCCTTCGACGCCTTCGGCGCCTACGACGACGACTGGGGTGACTTCGTCGACAGCCGCCTCGGATCCTGGGAGAAGCCGCGGGGCCCGCTCCCCCTCTCCCTGTTCGGCGCCGACGAGGACGAGGAGGAGGAGGAGGGACCGGCCGAGCTGCCGCCGACGGCTGCGGATCAGCGGGGAGCGTCGCACGCGTCCTCCAATGGATCGAAGCCGGCTGATCTCAAGGACCTCATCGCCGGCCTCTATGGATCTCACCCGCAACCCTCCTCCACCGACGCCGCGGAGGTGGGTACACAGGAGGGGTCAGCGGTAGCGGCGGCGGAGGAGGAGGAGGAGGATGGTGACGGATTCGAAGATGATGGCTGGGAATTCAAGGCCGCGGCGCCTTCTTCTTCGTCGGATGCTGTACAGGATGGCGGCAGACAAGCCCATGGGGATCTTACTCAGGATGTACCAAAGTCAATGAGCAGCGACCAGGAGGGCTGGTCATTATTTACTAGTGTTAGCGAAAATTTGAACAATGTTCAAACTACAGATCATGTTGGAACTCGTGAGTCCGCTGGACAAAGTGTGAAGGCCTTTAGTTATTTTCCACCCAATAATGCAGCCATACTCGACCTGTACAAAGAAAGTGAACCGATTGATGCTGTCCACATTATGCAATGTTCTTCAGAAAGTGTGCAAAGCTCTTCTGATATGTTCTCTAATACTGAAATGAACTCTTCATTTGGAACAGATGAAAACCATTCAATTAAATCAGCAAGTGATAGGATTTTGATTGATTTCTACCATAAGCTGAGAGAAGAATCATTGACGGTAATATCCCAGTACAAGAAGGATCTTAAGGAAAGCCAGAAGAATTCTATGCTTTCTGATGAAAAGAATGAAGTGATGACAGAAACTGAAAGGGAGATTCAGGAAATTTGCAAGGAATTACAAGATTCTTCACTTGCGAAAGGTTTTTGCAAAGATGAACATCCTTCAAAGGATGTTTGCATTTCTGAGCTGCTTAACAGTGCCAAAGAGGATCATTTGAAGGATTTTGATAAAGAATACCATTTAACAGAAATAATAGCAATGGCACTGGAAGACATGAGTTCAGCTGTTAAACTCTATAAGCACAGCGTGTCAATCCTTCGTACCTTGGAAATAGCATCCAAAGAGGAGCAATGTGATTATGTCAGTGCATGGTACAGTATGCTTCTGTCCTGTGCCCAAGAATTGCAGCATGGTGCGATGATTTGGCAGGAATCTTGTCATGCAAATGTTGGCGAAACAGTAATTTCTCAAGGTGCTCATTACTTTATTGCTCTTGGGGAGATCTACAGAGTTGCACAGATCTTACATATATCCATGCTATCTTTCAAGCCTTGGGTTCTTGCAGATCCTGGAATGTTGAGTAAAATGTTGGTTTGTTGGAACAGCTGCGTTAATTCATGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAACTTACATGCACCTGTTGCTAAAGTTCTTCTCGAGTCTATCATCAATATTAATGACATTGAGGTGCCCAATCTTCAAAGCTTCCTTCCCAGTGACAAGATGGCATGTAAACTTACCCTCTTGCCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTT GGGATGCCGATCACTACTTTGTTAAAGTTGC AAATCTGTGGGCTAATCAGATATCTTCTGACCCTCCCCAGTTTTCAGTCTCTCGTGTTGCTTAAATTAGCAAGGAAATCAACAATTGTCCATCAAGCAACCTGTCAATGACGTGGGAACGGGATTGCCCCTTTTAAGAGAAAACTTGACTACTTATGATAGGACCATCGGAAGCTAAAGATTCTCCTGCACAACTGCTTCTGGAAGGTTAACAGTATTGGTCAATGATCATTCTTTTGTGCAAGTAGCATTTTGCACCATTTTTTACGTAGTGCTTGGCAACAGCACTAGTATGGGAAGCCAAAATGTTCCTTTAGCTACACATTCTGTTTAGACTGGACTGAAGTACAGCACATTGAAGTGTACAAACTGCGAAATCCAATGGGTGCATGCAATGCAGTAATAGACGTGTATAGATTGTAAGCTTAAATAATCGGTATAGAGGAGGGAGAGATGAGGCTGTATTGAGCTGATTACAAGCTATATAAATCAGCTGTTTGTTGTGACCTTTTCAGCAACGTCAGGTTTGTTCAGACATCATAGCCCATTTCAGCAAATGAGATCTGCAAATGATGTGGAATGTGTATGATTCTAGCTGACCCCAGTTGCTTTGTAATAAGTTAGTAAACCTGGAAGTCGCCGACCACAACAGGTTATCTGTTTTTGCTGTTTTAACATAGTTATTTTCTGTTTAAGTTCTTGTGTGGAAAACATGCCTGAATAGCAAGGAAGATTA]
[+] EMBL CB630971             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                aAAGATGATGGCTGGGAATTCAAGGCCGCGGCGCCTTCTTCTTCGTCGGATGCTGTACAGGATGGCGGCAGACAAGCCCATGGGGATCTTACTCAGGATGTACCAAAGTCAATGAGCAGCGACCAGGAGGGCTGGTCATTATTTACTAGTGTTAGCGAAAATTTGAACAATGTTCAAACTACAGATCATGTTGGAACTCGTGAGTCCGCTGGACAAAGTGTGAAGGCCTTTAGTTATTTTCCACCCAATAATGCAGCCATACTCCACCTGTACAAAGAAAGTGAACCGATTGATGCTGTCCACATTATGCAATGTTCTTCAGAAAGTGTGCAAAGCTCTTCTGATATGTTCTCTAATACTGAAATGAACTCTTCATTTGGAACAGATGAAAACCATTCAATTAAATCAGCAAGTGATAGGATTTTGATTGATTTCTACCATAAGCTGAGAGAAGAATCATTGACGGTAATATCCCAGTACAAGAAGGATCTTAAGGAAAGCCAGAAGAATTCTATGCTTTCTGATGAAAAGAATGAAGTGATGACAGAAACTGAAAGGGAGATTCAGGAAATTTGCAAGGAATTACAAGATTCTTCACTTGCGAAAGGTTTTTGCAAAGATGAACATCCTTCAAAGGATGTTTGCATTTCTGAGCTGCTTAACAGTGCCAAAGAGGATCATTTGAAGGATTTTGATAAAGAATACCATTTAACAGAAATAATAGCAATGGCACTGGAAGACATGAGTTCAGCTGTTAAACTCTATAAGCACAGCGTGTCAATCCTTCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA764244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACTGAAAGGGAGATTCAGGAAATTTGCAAGGAATTACAAGATTCTTCACTTGCGAAAGGTTTTTGCAAAGATGGACATCCTTCAAAGGATGTTTGCATTTCTGAGCTGCTTAACAGTGCCAAAGAGGATCATTTGAAGGATTTTGATAAAGAATACCATTTAACAGAAATAATAGCAATGGCACTGGAAGACATGAGTTCAGCTGTTAAACTCTATAAGCACAGCGTGTCAATCCTTCGTACCTTGGAAATAGCATCCAAAGAGGAGCAATGTGATTATGTCAGTGCATGGTACAGTATGCTTCTGTCCTGTGCCCAAGAATTGCAGCATGGTGCGATGATTTGGCAGGAATCTTGTCATGCAAATGTTGGCGAAACAGTAATTTCTCAAGGTGCTCATTACTTTATTGCTCTTGGGGAGATCTACAGAGTTGCACAGATCTTACATATATCCATGCTATCTTTCAAGCCTTGGGTTCTTGCAGATCCTGGAATGTTGAGCAAAATGTTGGTTTGTTGGAACAGCTGCGTTAATTCATGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAACTTAGATGCACCTGTTGCTAAAGNTCTTCTCGAGTCTATCATCAATATTAATGACATTGAGGTGCCCAATCTTCAAAGCTTCCTTTCCAGTGACAAGATGGCATGTAAACTTACCCTCTTGNCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTTGGGGATGNCAATCACTACTTTGGTTAAGGTGCNAAATCTGNGGGCTAATCANATATCTTCTGA NCTTCCCAANTTTCAGGCTCTCGGGGTGCTTAAATTAGC AGGGAATCAACAATTGGCCATCAAGCAA CTGTCAATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_6982#0 CCTCTTCTCCTCCAACCGCCCACCATCTCATCTCTCGCACGCACGCACGCACCCGCCATT GCTGATTGCACCTCCCCCCAACCCCACCTCCCCGATGGACGCCGTCGCGTTCCCGCCGCC GCCCGCCCCGTTCCTCGACGACGACCTCGATTTCGGCGACTTCGCCTTCGCCGATCCCCA GCCCGCCGCCGCCGCCGCCTTCGACGCCTTCGGCGCCTACGACGACGACTGGGGTGACTT CGTCGACAGCCGCCTCGGATCCTGGGAGAAGCCGCGGGGCCCGCTCCCCCTCTCCCTGTT CGGCGCCGACGAGGACGAGGAGGAGGAGGAGGGACCGGCCGAGCTGCCGCCGACGGCTGC GGATCAGCGGGGAGCGTCGCACGCGTCCTCCAATGGATCGAAGCCGGCTGATCTCAAGGA CCTCATCGCCGGCCTCTATGGATCTCACCCGCAACCCTCCTCCACCGACGCCGCGGAGGT GGGTACACAGGAGGGGTCAGCGGTAGCGGCGGCGGAGGAGGAGGAGGAGGATGGTGACGG ATTCGAAGATGATGGCTGGGAATTCAAGGCCGCGGCGCCTTCTTCTTCGTCGGATGCTGT ACAGGATGGCGGCAGACAAGCCCATGGGGATCTTACTCAGGATGTACCAAAGTCAATGAG CAGCGACCAGGAGGGCTGGTCATTATTTACTAGTGTTAGCGAAAATTTGAACAATGTTCA AACTACAGATCATGTTGGAACTCGTGAGTCCGCTGGACAAAGTGTGAAGGCCTTTAGTTA TTTTCCACCCAATAATGCAGCCATACTCGACCTGTACAAAGAAAGTGAACCGATTGATGC TGTCCACATTATGCAATGTTCTTCAGAAAGTGTGCAAAGCTCTTCTGATATGTTCTCTAA TACTGAAATGAACTCTTCATTTGGAACAGATGAAAACCATTCAATTAAATCAGCAAGTGA TAGGATTTTGATTGATTTCTACCATAAGCTGAGAGAAGAATCATTGACGGTAATATCCCA GTACAAGAAGGATCTTAAGGAAAGCCAGAAGAATTCTATGCTTTCTGATGAAAAGAATGA AGTGATGACAGAAACTGAAAGGGAGATTCAGGAAATTTGCAAGGAATTACAAGATTCTTC ACTTGCGAAAGGTTTTTGCAAAGATGAACATCCTTCAAAGGATGTTTGCATTTCTGAGCT GCTTAACAGTGCCAAAGAGGATCATTTGAAGGATTTTGATAAAGAATACCATTTAACAGA AATAATAGCAATGGCACTGGAAGACATGAGTTCAGCTGTTAAACTCTATAAGCACAGCGT GTCAATCCTTCGTACCTTGGAAATAGCATCCAAAGAGGAGCAATGTGATTATGTCAGTGC ATGGTACAGTATGCTTCTGTCCTGTGCCCAAGAATTGCAGCATGGTGCGATGATTTGGCA GGAATCTTGTCATGCAAATGTTGGCGAAACAGTAATTTCTCAAGGTGCTCATTACTTTAT TGCTCTTGGGGAGATCTACAGAGTTGCACAGATCTTACATATATCCATGCTATCTTTCAA GCCTTGGGTTCTTGCAGATCCTGGAATGTTGAGTAAAATGTTGGTTTGTTGGAACAGCTG CGTTAATTCATGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAA CTTACATGCACCTGTTGCTAAAGTTCTTCTCGAGTCTATCATCAATATTAATGACATTGA GGTGCCCAATCTTCAAAGCTTCCTTCCCAGTGACAAGATGGCATGTAAACTTACCCTCTT GCCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTTGGGATGCCGATCACTACTTTGT TAAAGTTGCAAATCTGTGGGCTAATCAGATATCTTCTGACCCTCCCCAGTTTTCAGTCTC TCGTGTTGCTTAAATTAGCAAGGAAATCAACAATTGTCCATCAAGCAACCTGTCAATGAC GTGGGAACGGGATTGCCCCTTTTAAGAGAAAACTTGACTACTTATGATAGGACCATCGGA AGCTAAAGATTCTCCTGCACAACTGCTTCTGGAAGGTTAACAGTATTGGTCAATGATCAT TCTTTTGTGCAAGTAGCATTTTGCACCATTTTTTACGTAGTGCTTGGCAACAGCACTAGT ATGGGAAGCCAAAATGTTCCTTTAGCTACACATTCTGTTTAGACTGGACTGAAGTACAGC ACATTGAAGTGTACAAACTGCGAAATCCAATGGGTGCATGCAATGCAGTAATAGACGTGT ATAGATTGTAAGCTTAAATAATCGGTATAGAGGAGGGAGAGATGAGGCTGTATTGAGCTG ATTACAAGCTATATAAATCAGCTGTTTGTTGTGACCTTTTCAGCAACGTCAGGTTTGTTC AGACATCATAGCCCATTTCAGCAAATGAGATCTGCAAATGATGTGGAATGTGTATGATTC TAGCTGACCCCAGTTGCTTTGTAATAAGTTAGTAAACCTGGAAGTCGCCGACCACAACAG GTTATCTGTTTTTGCTGTTTTAACATAGTTATTTTCTGTTTAAGTTCTTGTGTGGAAAAC ATGCCTGAATAGCAAGGAAGATTA



consensusID : consensus_6982#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 755
fasta sequence
                              [GAGACAAGGGGGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAACTTAGATGCACCTGTTGCTAAAGTTCTTCTCGAGTCTATCATCAATATTAATGACATTGAGGTGCCCAATCTTCAAAGCTTCCTTCCCAGTGACAAGATGGCATGTAAACTTACCCTCTTGCCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTTGGGATGCCAATCACTACTTTGTTAAAGTTGCAAATCTGTGGGCTAATCAGATATCTTCTGACACTCCCCAGTTTTCAGTCTCTCGTGTTGCTTAAATTAGCAAGGAAATCAACAATTGTCCATCAAGCAACCTGTCAATGACGTGGGAACGGGATTGCCCCTTTTAAGAGAAAACTTGACTACTTATGATAGGACCATCGGAAGCTAAAGATTCTCCTGCACAACTGCTTCTCGAAGGTTAACAGTATTGGTCAATGATCATTCTTTTGTGCAAGTAGCATTTTGCACCATTTTTTACGTAGTGCTTGGCAACAGCACTAGTATGGGAAGCCAAAATGTTCCTTTAGCTACACATTCTGTTTAGACTGGACTGAAGTACAGCACATTGAAGTGTACAAACTGCGAAATCCAATGGGTGCATGCAATGCAATAATAGACGTGTATAGATTGTAAGCTTAAATAATCGGTATAGAGGANGGAGAGATGANGCTGTATTGAGCTGATTACAAGCTATATAAATCAGCTGGTTGGTTGNGA]

[+] EMBL CB096843             [GAGACAAGGGGGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAACTTAGATGCACCTGTTGCTAAAGTTCTTCTCGAGTCTATCATCAATATTAATGACATTGAGGTGCCCAATCTTCAAAGCTTCCTTCCCAGTGACAAGATGGCATGTAAACTTACCCTCTTGCCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTTGGGATGCCAATCACTACTTTGTTAAAGTTGCAAATCTGTGGGCTAATCAGATATCTTCTGACACTCCCCAGTTTTCAGTCTCTCGTGTTGCTTAAATTAGCAAGGAAATCAACAATTGTCCATCAAGCAACCTGTCAATGACGTGGGAACGGGATTGCCCCTTTTAAGAGAAAACTTGACTACTTATGATAGGACCATCGGAAGCTAAAGATTCTCCTGCACAACTGCTTCTCGAAGGTTAACAGTATTGGTCAATGATCATTCTTTTGTGCAAGTAGCATTTTGCACCATTTTTTACGTAGTGCTTGGCAACAGCACTAGTATGGGAAGCCAAAATGTTCCTTTAGCTACACATTCTGTTTAGACTGGACTGAAGTACAGCACATTGAAGTGTACAAACTGCGAAATCCAATGGGTGCATGCAATGCAATAATAGACGTGTATAGATTGTAAGCTTAAATAATCGGTATAGAGGANGGAGAGATGANGCTGTATTGAGCTGATTACAAGCTATATAAATCAGCTGGTTGGTTGNGA]


>consensus_6982#1 GAGACAAGGGGGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAA CTTAGATGCACCTGTTGCTAAAGTTCTTCTCGAGTCTATCATCAATATTAATGACATTGA GGTGCCCAATCTTCAAAGCTTCCTTCCCAGTGACAAGATGGCATGTAAACTTACCCTCTT GCCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTTGGGATGCCAATCACTACTTTGT TAAAGTTGCAAATCTGTGGGCTAATCAGATATCTTCTGACACTCCCCAGTTTTCAGTCTC TCGTGTTGCTTAAATTAGCAAGGAAATCAACAATTGTCCATCAAGCAACCTGTCAATGAC GTGGGAACGGGATTGCCCCTTTTAAGAGAAAACTTGACTACTTATGATAGGACCATCGGA AGCTAAAGATTCTCCTGCACAACTGCTTCTCGAAGGTTAACAGTATTGGTCAATGATCAT TCTTTTGTGCAAGTAGCATTTTGCACCATTTTTTACGTAGTGCTTGGCAACAGCACTAGT ATGGGAAGCCAAAATGTTCCTTTAGCTACACATTCTGTTTAGACTGGACTGAAGTACAGC ACATTGAAGTGTACAAACTGCGAAATCCAATGGGTGCATGCAATGCAATAATAGACGTGT ATAGATTGTAAGCTTAAATAATCGGTATAGAGGANGGAGAGATGANGCTGTATTGAGCTG ATTACAAGCTATATAAATCAGCTGGTTGGTTGNGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6982#0      CCTCTTCTCCTCCAACCGCCCACCATCTCATCTCTCGCACGCACGCACGCACCCGCCATT 60
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GCTGATTGCACCTCCCCCCAACCCCACCTCCCCGATGGACGCCGTCGCGTTCCCGCCGCC 120
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GCCCGCCCCGTTCCTCGACGACGACCTCGATTTCGGCGACTTCGCCTTCGCCGATCCCCA 180
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GCCCGCCGCCGCCGCCGCCTTCGACGCCTTCGGCGCCTACGACGACGACTGGGGTGACTT 240
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      CGTCGACAGCCGCCTCGGATCCTGGGAGAAGCCGCGGGGCCCGCTCCCCCTCTCCCTGTT 300
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      CGGCGCCGACGAGGACGAGGAGGAGGAGGAGGGACCGGCCGAGCTGCCGCCGACGGCTGC 360
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GGATCAGCGGGGAGCGTCGCACGCGTCCTCCAATGGATCGAAGCCGGCTGATCTCAAGGA 420
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      CCTCATCGCCGGCCTCTATGGATCTCACCCGCAACCCTCCTCCACCGACGCCGCGGAGGT 480
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GGGTACACAGGAGGGGTCAGCGGTAGCGGCGGCGGAGGAGGAGGAGGAGGATGGTGACGG 540
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      ATTCGAAGATGATGGCTGGGAATTCAAGGCCGCGGCGCCTTCTTCTTCGTCGGATGCTGT 600
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      ACAGGATGGCGGCAGACAAGCCCATGGGGATCTTACTCAGGATGTACCAAAGTCAATGAG 660
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      CAGCGACCAGGAGGGCTGGTCATTATTTACTAGTGTTAGCGAAAATTTGAACAATGTTCA 720
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      AACTACAGATCATGTTGGAACTCGTGAGTCCGCTGGACAAAGTGTGAAGGCCTTTAGTTA 780
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      TTTTCCACCCAATAATGCAGCCATACTCGACCTGTACAAAGAAAGTGAACCGATTGATGC 840
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      TGTCCACATTATGCAATGTTCTTCAGAAAGTGTGCAAAGCTCTTCTGATATGTTCTCTAA 900
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      TACTGAAATGAACTCTTCATTTGGAACAGATGAAAACCATTCAATTAAATCAGCAAGTGA 960
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      TAGGATTTTGATTGATTTCTACCATAAGCTGAGAGAAGAATCATTGACGGTAATATCCCA 1020
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GTACAAGAAGGATCTTAAGGAAAGCCAGAAGAATTCTATGCTTTCTGATGAAAAGAATGA 1080
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      AGTGATGACAGAAACTGAAAGGGAGATTCAGGAAATTTGCAAGGAATTACAAGATTCTTC 1140
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      ACTTGCGAAAGGTTTTTGCAAAGATGAACATCCTTCAAAGGATGTTTGCATTTCTGAGCT 1200
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GCTTAACAGTGCCAAAGAGGATCATTTGAAGGATTTTGATAAAGAATACCATTTAACAGA 1260
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      AATAATAGCAATGGCACTGGAAGACATGAGTTCAGCTGTTAAACTCTATAAGCACAGCGT 1320
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GTCAATCCTTCGTACCTTGGAAATAGCATCCAAAGAGGAGCAATGTGATTATGTCAGTGC 1380
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      ATGGTACAGTATGCTTCTGTCCTGTGCCCAAGAATTGCAGCATGGTGCGATGATTTGGCA 1440
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GGAATCTTGTCATGCAAATGTTGGCGAAACAGTAATTTCTCAAGGTGCTCATTACTTTAT 1500
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      TGCTCTTGGGGAGATCTACAGAGTTGCACAGATCTTACATATATCCATGCTATCTTTCAA 1560
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GCCTTGGGTTCTTGCAGATCCTGGAATGTTGAGTAAAATGTTGGTTTGTTGGAACAGCTG 1620
consensus_6982#1      -----------------------------------------------------------G 1
                                                                                 *

consensus_6982#0      CGTTAATTCATGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAA 1680
consensus_6982#1      AGACAAGG-GGGGACTAGTGGTTTAGGAATGGCTCTTACAATGGTTGTCGACAGCAAGAA 60
                       *  **     *************************************************

consensus_6982#0      CTTACATGCACCTGTTGCTAAAGTTCTTCTCGAGTCTATCATCAATATTAATGACATTGA 1740
consensus_6982#1      CTTAGATGCACCTGTTGCTAAAGTTCTTCTCGAGTCTATCATCAATATTAATGACATTGA 120
                      **** *******************************************************

consensus_6982#0      GGTGCCCAATCTTCAAAGCTTCCTTCCCAGTGACAAGATGGCATGTAAACTTACCCTCTT 1800
consensus_6982#1      GGTGCCCAATCTTCAAAGCTTCCTTCCCAGTGACAAGATGGCATGTAAACTTACCCTCTT 180
                      ************************************************************

consensus_6982#0      GCCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTTGGGATGCCGATCACTACTTTGT 1860
consensus_6982#1      GCCCACTAGTCTTGTACCTGGAATGGAGGTCATCATTTGGGATGCCAATCACTACTTTGT 240
                      ********************************************** *************

consensus_6982#0      TAAAGTTGCAAATCTGTGGGCTAATCAGATATCTTCTGACCCTCCCCAGTTTTCAGTCTC 1920
consensus_6982#1      TAAAGTTGCAAATCTGTGGGCTAATCAGATATCTTCTGACACTCCCCAGTTTTCAGTCTC 300
                      **************************************** *******************

consensus_6982#0      TCGTGTTGCTTAAATTAGCAAGGAAATCAACAATTGTCCATCAAGCAACCTGTCAATGAC 1980
consensus_6982#1      TCGTGTTGCTTAAATTAGCAAGGAAATCAACAATTGTCCATCAAGCAACCTGTCAATGAC 360
                      ************************************************************

consensus_6982#0      GTGGGAACGGGATTGCCCCTTTTAAGAGAAAACTTGACTACTTATGATAGGACCATCGGA 2040
consensus_6982#1      GTGGGAACGGGATTGCCCCTTTTAAGAGAAAACTTGACTACTTATGATAGGACCATCGGA 420
                      ************************************************************

consensus_6982#0      AGCTAAAGATTCTCCTGCACAACTGCTTCTGGAAGGTTAACAGTATTGGTCAATGATCAT 2100
consensus_6982#1      AGCTAAAGATTCTCCTGCACAACTGCTTCTCGAAGGTTAACAGTATTGGTCAATGATCAT 480
                      ****************************** *****************************

consensus_6982#0      TCTTTTGTGCAAGTAGCATTTTGCACCATTTTTTACGTAGTGCTTGGCAACAGCACTAGT 2160
consensus_6982#1      TCTTTTGTGCAAGTAGCATTTTGCACCATTTTTTACGTAGTGCTTGGCAACAGCACTAGT 540
                      ************************************************************

consensus_6982#0      ATGGGAAGCCAAAATGTTCCTTTAGCTACACATTCTGTTTAGACTGGACTGAAGTACAGC 2220
consensus_6982#1      ATGGGAAGCCAAAATGTTCCTTTAGCTACACATTCTGTTTAGACTGGACTGAAGTACAGC 600
                      ************************************************************

consensus_6982#0      ACATTGAAGTGTACAAACTGCGAAATCCAATGGGTGCATGCAATGCAGTAATAGACGTGT 2280
consensus_6982#1      ACATTGAAGTGTACAAACTGCGAAATCCAATGGGTGCATGCAATGCAATAATAGACGTGT 660
                      *********************************************** ************

consensus_6982#0      ATAGATTGTAAGCTTAAATAATCGGTATAGAGGAGGGAGAGATGAGGCTGTATTGAGCTG 2340
consensus_6982#1      ATAGATTGTAAGCTTAAATAATCGGTATAGAGGANGGAGAGATGANGCTGTATTGAGCTG 720
                      ********************************** ********** **************

consensus_6982#0      ATTACAAGCTATATAAATCAGCTGTTTG-TTGTGACCTTTTCAGCAACGTCAGGTTTGTT 2399
consensus_6982#1      ATTACAAGCTATATAAATCAGCTGGTTGGTTGNGA------------------------- 755
                      ************************ *** *** **                         

consensus_6982#0      CAGACATCATAGCCCATTTCAGCAAATGAGATCTGCAAATGATGTGGAATGTGTATGATT 2459
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      CTAGCTGACCCCAGTTGCTTTGTAATAAGTTAGTAAACCTGGAAGTCGCCGACCACAACA 2519
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      GGTTATCTGTTTTTGCTGTTTTAACATAGTTATTTTCTGTTTAAGTTCTTGTGTGGAAAA 2579
consensus_6982#1      ------------------------------------------------------------
                                                                                  

consensus_6982#0      CATGCCTGAATAGCAAGGAAGATTA 2604
consensus_6982#1      -------------------------
                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)