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Oryza sativa
cluster # 6990 cluster # 6990       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6990#0 length = 1479 sequences # 2  
consensus_6990#1 length = 877 sequences # 1  
consensus_6990#2 length = 708 sequences # 1  

consensusID : consensus_6990#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1479
fasta sequence
                              [AGAAGAGGATGACTCACCAGTGCAATGCAGAGTTACCTCCTTGGAGAACATGTCGCCAGAGTCGGAGCCTCAAAGAACTCTCTTGTCAAGGGCTGGTTCCGCGAGTCCTGCAGAATTCAGAGTTTACAAGCCCACTGGCTGTGTGGATGCTGCAACTCAAACTGATGACCTCGGCAGAAGGTCAGTCCGGAAAGTGCCCGAGATGCATAAGAAGAGTTTGAGCACTGATCATGACTCCGTAGTCCGGGAAATTACTGAGTACCGGCAAAGCCAACCACGCCGGTCAGCAGAGCTCCAGGGGATCGCCAGGGAGGCCATGTCCCAGTGTCATACTCCACTGAGCATACCTTCATCCCGTGGCAAGTCGGAGAGTTTAGAGTCCTTGATACGAGCAGATAACAATGCATTGAATAGTTTTCGGATTCTTGAAGAGGATGATATCATTATGCCAACCTGCCCCAGGCTGAGGCCAGCGAATGTACTAATGCAACTTATCACCTGTGGTTCGCTTTCGGTGAAAGATCATGAGAATATCAGACTTGTTGAAGGATACAAGCCAAGGTTCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCGTACCATGATGATGGGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCGTCTGGAAGACAAGGAATACTTTAGTGGGAGCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTGCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGTTAAGTGCTAGTGGCCTCTCTTAACCCTCCCCAACTCTTTGTCATTGCTGGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTGCACCCATGATCAGCGTTGAGTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAATGCCTCTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTCAGTTAGCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGTTATTATCAAAATCTCTTCTCCTTATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATGTATTGTTCGTTTTGTATTTTGCTTCTGTCCTTAAATCAAGAGAGAGTAGTGAT]

[+] EMBL AK070368             [AGAAGAGGATGACTCACCAGTGCAATGCAGAGTTACCTCCTTGGAGAACATGTCGCCAGAGTCGGAGCCTCAAAGAACTCTCTTGTCAAGGGCTGGTTCCGCGAGTCCTGCAGAATTCAGAGTTTACAAGCCCACTGGCTGTGTGGATGCTGCAACTCAAACTGATGACCTCGGCAGAAGGTCAGTCCGGAAAGTGCCCGAGATGCATAAGAAGAGTTTGAGCACTGATCATGACTCCGTAGTCCGGGAAATTACTGAGTACCGGCAAAGCCAACCACGCCGGTCAGCAGAGCTCCAGGGGATCGCCAGGGAGGCCATGTCCCAGTGTCATACTCCACTGAGCATACCTTCATCCCGTGGCAAGTCGGAGAGTTTAGAGTCCTTGATACGAGCAGATAACAATGCATTGAATAGTTTTCGGATTCTTGAAGAGGATGATATCATTATGCCAACCTGCCCCAGGCTGAGGCCAGCGAATGTACTAATGCAACTTATCACCTGTGGTTCGCTTTCGGTGAAAGATCATGAGAATATCAGACTTGTTGAAGGATACAAGCCAAGGTTCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCGTACCATGATGATGGGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCGTCTGGAAGACAAGGAATACTTTAGTGGGAGCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTGCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGTTAAGTGCTAGTGGCCTCTCTTAACCCTCCCCAACTCTTTGTCATTGCTGGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTGCACCCATGATCAGCGTTGAGTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAATGCCTCTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTCAGTTAGCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGTTATTATCAAAATCTCTTCTCCTTATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATGTATTGTTCGTTTTGTATTTTGCTTCTGTCCTTAAATCAAGAGAGAGTAGTGAT]
[+] EMBL AK101780             [AGAAGAGGATGACTCACCAGTGCAATGCAGAGTTACCTCCTTGGAGAACATGTCGCCAGAGTCGGAGCCTCAAAGAACTCTCTTGTCAAGGGCTGGTTCCGCGAGTCCTGCAGAATTCAGAGTTTACAAGCCCACTGGCTGTGTGGATGCTGCAACTCAAACTGATGACCTCGGCAGAAGGTCAGTCCGGAAAGTGCCCGAGATGCATAAGAAGAGTTTGAGCACTGATCATGACTCCGTAGTCCGGGAAATTACTGAGTACCGGCAAAGCCAACCACGCCGGTCAGCAGAGCTCCAAGGGATCGCCAGGGAGGCCATGTCCCAGTGTCATACTCCACTGAGCATACCTTCATCCCGTGGCAAGTCGGAGAGTTTAGAGTCCTTGATACGAGCAGATAACAATGCATTGAATAGTTTTCGGATTCTTGAAGAGGATGATATCATTATGCCAACCTGCCCCAAGCTGAGGCCAGCGAATGTACTAATGCAACTTATCACCTGTGGTTCGCTTTCGGTGAAAGATCATGAGAATATCAGACTTGTTGAAGGATACAAGCCAAGGTTCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCGTACCATGATGATGGGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCGTCTGGAAGACAAGGAATACTTTAGTGGGAGCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCACGCAAGGTGCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGTTAAGTGCTAGTGGCCTCTCTTAACCCTCCCCAACTCTTTGTCATTGCTGGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTGCACCCATGATCAGCGTTGAGTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAATGCCTCTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTCAGTTAGCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGTTATTATCAAAATCTCTTCTCCTTATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATGTATTGTTCGTTTTGTATCTTGCTTCTGTCCTTAAATCAAGAGAGAGTAGT   ]


>consensus_6990#0 AGAAGAGGATGACTCACCAGTGCAATGCAGAGTTACCTCCTTGGAGAACATGTCGCCAGA GTCGGAGCCTCAAAGAACTCTCTTGTCAAGGGCTGGTTCCGCGAGTCCTGCAGAATTCAG AGTTTACAAGCCCACTGGCTGTGTGGATGCTGCAACTCAAACTGATGACCTCGGCAGAAG GTCAGTCCGGAAAGTGCCCGAGATGCATAAGAAGAGTTTGAGCACTGATCATGACTCCGT AGTCCGGGAAATTACTGAGTACCGGCAAAGCCAACCACGCCGGTCAGCAGAGCTCCAGGG GATCGCCAGGGAGGCCATGTCCCAGTGTCATACTCCACTGAGCATACCTTCATCCCGTGG CAAGTCGGAGAGTTTAGAGTCCTTGATACGAGCAGATAACAATGCATTGAATAGTTTTCG GATTCTTGAAGAGGATGATATCATTATGCCAACCTGCCCCAGGCTGAGGCCAGCGAATGT ACTAATGCAACTTATCACCTGTGGTTCGCTTTCGGTGAAAGATCATGAGAATATCAGACT TGTTGAAGGATACAAGCCAAGGTTCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCG TACCATGATGATGGGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCG TCTGGAAGACAAGGAATACTTTAGTGGGAGCCTTATCGAAACTAAGATGCAAAGAGATGT ACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAA CGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTG CCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTC ACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATC AGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTC TTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGTTAAGTGCTAGTGGCCTCTCT TAACCCTCCCCAACTCTTTGTCATTGCTGGGCTGTCGTCAGGAGCTCGAGTCGTGATTCA GTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTGCACCCATGATCAGCG TTGAGTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAAT GCCTCTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTCA GTTAGCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGTTATTATCAAAATCTCTTC TCCTTATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATGTATTGTTCGTTTTG TATTTTGCTTCTGTCCTTAAATCAAGAGAGAGTAGTGAT



consensusID : consensus_6990#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 877
fasta sequence
                              [AAGCCAAGTTCCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCGTACCATGATGATGGGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCGTCTGGAAGACAAGGAATACTTTAGTGGGAGCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTGCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTTCACCCATGATCAGCGTTGAGTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAATGCCTCTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTCAGTTAGCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGTTATTATCAAAATCTCTTCTCCTTATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATGTATTGTTCGTTTTGTATTTTGCTTCTGTCCTTAAATCAAGAGAGAGTAGTGATCT]

[-] EMBL CB621611             [AAGCCAAGTTCCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCGTACCATGATGATGGGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCGTCTGGAAGACAAGGAATACTTTAGTGGGAGCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTGCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTTCACCCATGATCAGCGTTGAGTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAATGCCTCTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTCAGTTAGCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGTTATTATCAAAATCTCTTCTCCTTATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATGTATTGTTCGTTTTGTATTTTGCTTCTGTCCTTAAATCAAGAGAGAGTAGTGATCT]


>consensus_6990#1 AAGCCAAGTTCCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCGTACCATGATGATG GGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCGTCTGGAAGACAAG GAATACTTTAGTGGGAGCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGA TATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGAT TGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTGCCTCCCTCGGACG CCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGAC TGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGC AAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAG GAGAAGCTCGTCAAGATCGAAGAAAGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTAC ACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTTCACCCATGATCAGCGTTGA GTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAATGCCT CTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTCAGTTA GCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGTTATTATCAAAATCTCTTCTCCT TATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATGTATTGTTCGTTTTGTATT TTGCTTCTGTCCTTAAATCAAGAGAGAGTAGTGATCT



consensusID : consensus_6990#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 708
fasta sequence
                              [AGTGGGAGCCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTGCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTTCACCCATGATCAGCGTTGAGTTATTCATATAGGGGGGGGTGTGGACGGACACCGCGCGGCGAGGGCGGTTAGCTAGCTAGCTGCTGCCTGCTCGGCGAGGACGGGGCACGTACGAGGAGGCCGCCACGCCGGGCATGGTGGTGGCGATGGCGGCGGACATGGTGGGTGGCATTGATTGCTCGCTCGCTCGCGCCGGGGCGGGGAGGCAACGCGAGCGCGGCGTGGCGTGGCGCGGCGCGACGCGAACGGAGCGCC]

[-] EMBL CB621610             [AGTGGGAGCCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTGCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTTCACCCATGATCAGCGTTGAGTTATTCATATAGGGGGGGGTGTGGACGGACACCGCGCGGCGAGGGCGGTTAGCTAGCTAGCTGCTGCCTGCTCGGCGAGGACGGGGCACGTACGAGGAGGCCGCCACGCCGGGCATGGTGGTGGCGATGGCGGCGGACATGGTGGGTGGCATTGATTGCTCGCTCGCTCGCGCCGGGGCGGGGAGGCAACGCGAGCGCGGCGTGGCGTGGCGCGGCGCGACGCGAACGGAGCGCC]


>consensus_6990#2 AGTGGGAGCCCTTATCGAAACTAAGATGCAAAGAGATGTACCCGCTGACAGATATTCAGC GCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCAACGAGACGCTAGATTGCGCGAG ACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGTGCCTCCCTCGGACGCCGATACT GTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGTCACCGATCTCCGACTGCCGGAG GAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCATCAGGAGACGGCAGCAAGAGGTT CATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACTCTTTCAGGAAGGAGGAGAAGCT CGTCAAGATCGAAGAAAGGCTGTCGTCAGGAGCTCGAGTCGTGATTCAGTACACGGTGCC CTGCAATGGCGACAGCGATGAAGGCTGAGCTTTCACCCATGATCAGCGTTGAGTTATTCA TATAGGGGGGGGTGTGGACGGACACCGCGCGGCGAGGGCGGTTAGCTAGCTAGCTGCTGC CTGCTCGGCGAGGACGGGGCACGTACGAGGAGGCCGCCACGCCGGGCATGGTGGTGGCGA TGGCGGCGGACATGGTGGGTGGCATTGATTGCTCGCTCGCTCGCGCCGGGGCGGGGAGGC AACGCGAGCGCGGCGTGGCGTGGCGCGGCGCGACGCGAACGGAGCGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6990#0      AGAAGAGGATGACTCACCAGTGCAATGCAGAGTTACCTCCTTGGAGAACATGTCGCCAGA 60
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      GTCGGAGCCTCAAAGAACTCTCTTGTCAAGGGCTGGTTCCGCGAGTCCTGCAGAATTCAG 120
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      AGTTTACAAGCCCACTGGCTGTGTGGATGCTGCAACTCAAACTGATGACCTCGGCAGAAG 180
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      GTCAGTCCGGAAAGTGCCCGAGATGCATAAGAAGAGTTTGAGCACTGATCATGACTCCGT 240
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      AGTCCGGGAAATTACTGAGTACCGGCAAAGCCAACCACGCCGGTCAGCAGAGCTCCAGGG 300
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      GATCGCCAGGGAGGCCATGTCCCAGTGTCATACTCCACTGAGCATACCTTCATCCCGTGG 360
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      CAAGTCGGAGAGTTTAGAGTCCTTGATACGAGCAGATAACAATGCATTGAATAGTTTTCG 420
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      GATTCTTGAAGAGGATGATATCATTATGCCAACCTGCCCCAGGCTGAGGCCAGCGAATGT 480
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      ACTAATGCAACTTATCACCTGTGGTTCGCTTTCGGTGAAAGATCATGAGAATATCAGACT 540
consensus_6990#1      ------------------------------------------------------------
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      TGTTGAAGGATACAAGCCAAGGTTCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCG 600
consensus_6990#1      -------------AAGCCAAGTTCCCCAAACATGAAGTTCCCGTCACCGTTAATTTCTCG 47
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      TACCATGATGATGGGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCG 660
consensus_6990#1      TACCATGATGATGGGTGAGCTTGATTACCTGTCAGAGAATCCCAGATTGATGGGTATGCG 107
consensus_6990#2      ------------------------------------------------------------
                                                                                  

consensus_6990#0      TCTGGAAGACAAGGAATACTTTAGTGGGAGCC-TTATCGAAACTAAGATGCAAAGAGATG 719
consensus_6990#1      TCTGGAAGACAAGGAATACTTTAGTGGGAGCC-TTATCGAAACTAAGATGCAAAGAGATG 166
consensus_6990#2      ----------------------AGTGGGAGCCCTTATCGAAACTAAGATGCAAAGAGATG 38
                                            ********** ***************************

consensus_6990#0      TACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCA 779
consensus_6990#1      TACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCA 226
consensus_6990#2      TACCCGCTGACAGATATTCAGCGCTTAAACGTTCTTCTTCCTACAATGCGGAAAGGAGCA 98
                      ************************************************************

consensus_6990#0      ACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGT 839
consensus_6990#1      ACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGT 286
consensus_6990#2      ACGAGACGCTAGATTGCGCGAGACCTGACGAAGACACCGTCAACACATCTCGCGCAAGGT 158
                      ************************************************************

consensus_6990#0      GCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGT 899
consensus_6990#1      GCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGT 346
consensus_6990#2      GCCTCCCTCGGACGCCGATACTGTCATCCTTCCTGCACCCCAAGAGCGAGGCAATGAAGT 218
                      ************************************************************

consensus_6990#0      CACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCAT 959
consensus_6990#1      CACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCAT 406
consensus_6990#2      CACCGATCTCCGACTGCCGGAGGAGCTCGTCGGCCGGACCAGACTGCAGCCTTGCTTCAT 278
                      ************************************************************

consensus_6990#0      CAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACT 1019
consensus_6990#1      CAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACT 466
consensus_6990#2      CAGGAGACGGCAGCAAGAGGTTCATTGACGCCACAGGAGCACCGGGCAGCAGGATAGACT 338
                      ************************************************************

consensus_6990#0      CTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAAGTTAAGTGCTAGTGGCCTCTC 1079
consensus_6990#1      CTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAA--------------------- 505
consensus_6990#2      CTTTCAGGAAGGAGGAGAAGCTCGTCAAGATCGAAGAAA--------------------- 377
                      ***************************************                     

consensus_6990#0      TTAACCCTCCCCAACTCTTTGTCATTGCTGGGCTGTCGTCAGGAGCTCGAGTCGTGATTC 1139
consensus_6990#1      ------------------------------GGCTGTCGTCAGGAGCTCGAGTCGTGATTC 535
consensus_6990#2      ------------------------------GGCTGTCGTCAGGAGCTCGAGTCGTGATTC 407
                                                    ******************************

consensus_6990#0      AGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTGCACCCATGATCAGC 1199
consensus_6990#1      AGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTTCACCCATGATCAGC 595
consensus_6990#2      AGTACACGGTGCCCTGCAATGGCGACAGCGATGAAGGCTGAGCTTTCACCCATGATCAGC 467
                      ********************************************* **************

consensus_6990#0      GTTGAGTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAA 1259
consensus_6990#1      GTTGAGTTATTCATATAGGCTCTGTTGATAGAGAGAGATCAAGTTACTGACGAAATGAAA 655
consensus_6990#2      GTTGAGTTATTCATATAGGGGGGGGTG-TGGACGGACACCGCGCGGCGAGGGCGGTTAGC 526
                      *******************    * ** * **  ** * *  *   *    *   * *  

consensus_6990#0      TGCCTCTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTC 1319
consensus_6990#1      TGCCTCTCGTTTCTTTCTTCAGATTGAGATGTTAAGTTTGGAATTATTTTTCAAGCATTC 715
consensus_6990#2      TAGCTAGCTGCTGCCTGCTCGG----------CGAGGACGGGGC-ACGTACGAGGAGGCC 575
                      *  **  *   *   *  ** *            **   **    *  *   * *    *

consensus_6990#0      AGTTAGCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGT-TATTATCAAAATCTCT 1378
consensus_6990#1      AGTTAGCCTAGAGTATTCTTCTCTCTTCTTCCTATCTTTACGT-TATTATCAAAATCTCT 774
consensus_6990#2      GCCACGCCGGGCATGGTGGTGGCGATGGCGGCGGACATGGTGGGTGGCATTGATTGCTCG 635
                           ***  *  *  *  *  *  *     *   * *   *  *   **  *   *** 

consensus_6990#0      TCTCCTTATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATG-TATTGTTCGTT 1437
consensus_6990#1      TCTCCTTATCATCTGTAAGTGCCTTTAAATTAATTATAGAGTATAATG-TATTGTTCGTT 833
consensus_6990#2      -CTCGCTCGCGCCGGGGCGGGGAGGCAACGCGAGCGCGGCGTGGCGTGGCGCGGCGCGAC 694
                       ***  *  *  * *   * *     **    *     * **    **     *  **  

consensus_6990#0      TTGTATTTTGCTTCTGTCCTTAAATCAAGAGAGAGTAGTGAT-- 1479
consensus_6990#1      TTGTATTTTGCTTCTGTCCTTAAATCAAGAGAGAGTAGTGATCT 877
consensus_6990#2      GCGAACGGAGCGCC------------------------------ 708
                        * *    **  *                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)