cluster # 6998

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Oryza sativa
cluster # 6998 cluster # 6998 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6998#0 length = 437 sequences # 4

consensusID : consensus_6998#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 437
fasta sequence

                              [GGCCCCGGCGGCGGGTCCCACNAGGTCGGCCACGACTGGGTGCCCCGGCC-GGGCCCCGGCC-CCCCCCGGCT-GGANAAGCTCATGGACAGGANCGTCAGGTCGGAGGCCCTCCGTCAACAGCCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTTTTCTGTGGTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL C98975               [GGCCCCGGCGGCGGGTCCCACNAGGTCGGCCACGACTGGGTGCCCCGGCC GGGCCCCGGCC CCCCCCGGCT GGANAAGCTCATGGACAGGANCGTCAGGTCGGAGGCCCTCCGTCAACAGCCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAATCTGCATCGTGTAANTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTNAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTTTTCTGTGGTTAAAAAAAAAAAAAAAAA  ]
[+] EMBL C99471               [                               ACGACTGGGTGCTCCGGCCGGGGCCCCGGCCGCCGCGCGGCTGGGACAAGCNCATGGACAGGATCGTCAGGTCGGAGGCCNTCCGTCAACAGCCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAANCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTTTTCTGTAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU094649             [                                                                                                     GTCGGAGG CCTTCGTCAACAGCCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAG                                        ]
[-] EMBL CB663972             [                                                                                                      TCGGAGG CCTTCGTCATCACCCAGTGCAAGTAGTTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTCCCATACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAACCTTAAAAGCATATATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGGTAGTACTAATTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTT                             ]




>consensus_6998#0
GGCCCCGGCGGCGGGTCCCACNAGGTCGGCCACGACTGGGTGCCCCGGCCGGGCCCCGGC
CCCCCCCGGCTGGANAAGCTCATGGACAGGANCGTCAGGTCGGAGGCCCTCCGTCAACAG
CCAGTGCAAGTAGCTAAGCTAGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATC
ACTCACTGGTTAATCTTAATCTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTT
ACCCTACTGATTTACTTGCAGGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATAT
ATATGTATAGAGATAGAGAGAGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAA
TTAACTGTAATCCATTTTCATTATCCCATCTCGAAAGGACAAGGTGTTTTCTGTGGTTAA
AAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case