cluster # 7001

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Oryza sativa
cluster # 7001 cluster # 7001 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7001#0 length = 1962 sequences # 4
consensusID : consensus_7001#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1962
fasta sequence
                              [CCACCGGCAGTTACGCCTCCGCGCTCCTCCTTCCCAAGAGACGCAGATCTCCACCCCGCGCTCGCCTCGCTTCCCCCAAAAAGTCTTCTCGTGAGAGCTTTCCCCCCCCTCCTCCACCCAACAAATCCCCAGCCTCCCAGATTCGTGGCGGAGGCTGCGGCCTGCGGCTGTTCTAGGGTTAGCTCTCGCTCCGCCGGCATTTCTCGGTAGATAAAGTATTGTAAGGGCTTGGGTTTGCAACCGGAGATGGATGCTAAAAAGAAGAGGAACAAGAAGAAGAAGGGGAACCAAGGGAAGAACACTGGTGATGTAACGTCCAGCACTGCAGAGGCTGCCATTCGGTCCCACAATCATGAGACAGCCCCTAATGACCATCATAATGGCACTGATGCTGATGATGCAATGTCCACTGTTGGAGAGGAAGCTCCTCAGTACCAGAATCATGAGCCAGATCGACAGGCAAATCATGATAGCACAAACACTGATGATGTCATGTCCTCTGTTGGAGAGGGGATTCCATTTCAGAACCTTGACCCTGCCATGACACATGAAAATCACAAAGTCAGTAGTACAGCCCATGCTGATCAGAGGAGTGTTGAGATGTCAGATTCCACCGTGGAGCTTGACATGCACAGACTATATGAAGCAAAGCTTGATAAATTACATGATACGATAAAGAAGTTGGAAGATGAGAAGAGTTTGTGGCATCAAAAAATGAGCTCCATGGAGATTGAGGTTGAAAAGTTGCATAACAAAGTGGATTATCATGCACAGAATGAGGTCCGTTTGGAGGAAAAGCTCAATAATTTACAGAATGGGTATGATGTGCTGATTAAGAAGGAGGTAGCTTTGGATAACAAAGTCAGGTCCATAGAGGTCATCAATGATGCCTTAACTCATCAGGAGACGTCTCTTAAAGAGAGATTAAGTGGACTGGAGGAGACAAATAAAGTACTGCTTGTACAGGTGAAGGTGCTGGAGGAAGCTTCAAACAATACTGTTGAGGAAAGCCAGAGGTTGGTAAAAGGTTTTGATGAACTGGCATCAAGATTAGGAGTCTTTGAAGCAAAGTCTGCTCTTACTGAAGCCTCCGTGACTAAAAAGGGTAATGAACTGATTGTTGATAGAAGTGTAAACAGTTCTGCAGCAATTACTTCTGTGGATAACTATAGTCCAATCAACAGCAGTCCTAGCAACGCCTATGTTAATAATCATCTAGAAGAAGCTCCAATGCAACTTCCAGAAACAACAATCAATGATGTTTCTTCCGAGGGCCTCATTGACATGAATGCACATCAAAGGTCAAAGCAAGATTTTGATGAACCAAGAACAAGCGAAGAAATTCTGCCAGTTGCATTAGATGATATACAGATTCATGAGGAAGACCCATAACCACCGGTAGCCGATGATGAGGCAGAGGAGGTTCCATTTTCTGATGCTCCAATCGTCGGTGCTCCATTCCGGTTGATTTCATTCGTTGCTAGGTATGTCAGTGGTGCTGATTTGGTGAACCAGAAGTAATTCTCCATTAATGCCATCAAGCAGCTTGAGATCTGTATTTCTTGGAAAGAGGAGTCTTCCTGTTTTGATTCTGCTCACACAGTTATCTCGCTAAGATTGTGAGGATGTATACGATGGATGCACTGAATTCAACAGAGATATGGAACCTCTGTTCAGTTCTTGGTAGTGTGCTCGTGTCACTACCAGTTTTTCTTCCTCCCCTGTCAATTTTTCAGGGGCAGCAGAAGCTCTTGTTCCCCAGTTATAGTGTTATACACACAAGAGGCCTTCCTGACCATGTGGGGTGTACTGACCATATTTATTCTACAGAAACTGAAAATTTTTGGTATTCCAACAGATGTTTAATGCACTGAACAATGACCATGCATCTTGAAGAAAGTTGACCATTTGGATTTGATGTATTGCATTGATTGGATGGTTGCTAAAAAATGTTGTTTTGTC]

[+] EMBL AK109811             [CCACCGGCAGTTACGCCTCCGCGCTCCTCCTTCCCAAGAGACGCAGATCTCCACCCCGCGCTCGCCTCGCTTCCCCCAAAAAGTCTTCTCGTGAGAGCTTTCCCCCCCCTCCTCCACCCAACAAATCCCCAGCCTCCCAGATTCGTGGCGGAGGCTGCGGCCTGCGGCTGTTCTAGGGTTAGCTCTCGCTCCGCCGGCATTTCTCGGTAGATAAAGTATTGTAAGGGCTTGGGTTTGCAACCGGAGATGGATGCTAAAAAGAAGAGGAACAAGAAGAAGAAGGGGAACCAAGGGAAGAACACTGGTGATGTAACGTCCAGCACTGCAGAGGCTGCCATTCGGTCCCACAATCATGAGACAGCCCCTAATGACCATCATAATGGCACTGATGCTGATGATGCAATGTCCACTGTTGGAGAGGAAGCTCCTCAGTACCAGAATCATGAGCCAGATCGACAGGCAAATCATGATAGCACAAACACTGATGATGTCATGTCCTCTGTTGGAGAGGGGATTCCATTTCAGAACCTTGACCCTGCCATGACACATGAAAATCACAAAGTCAGTAGTACAGCCCATGCTGATCAGAGGAGTGTTGAGATGTCAGATTCCACCGTGGAGCTTGACATGCACAGACTATATGAAGCAAAGCTTGATAAATTACATGATACGATAAAGAAGTTGGAAGATGAGAAGAGTTTGTGGCATCAAAAAATGAGCTCCATGGAGATTGAGGTTGAAAAGTTGCATAACAAAGTGGATTATCATGCACAGAATGAGGTCCGTTTGGAGGAAAAGCTCAATAATTTACAGAATGGGTATGATGTGCTGATTAAGAAGGAGGTAGCTTTGGATAACAAAGTCAGGTCCATAGAGGTCATCAATGATGCCTTAACTCATCAGGAGACGTCTCTTAAAGAGAGATTAAGTGGACTGGAGGAGACAAATAAAGTACTGCTTGTACAGGTGAAGGTGCTGGAGGAAGCTTCAAACAATACTGTTGAGGAAAGCCAGAGGTTGGTAAAAGGTTTTGATGAACTGGCATCAAGATTAGGAGTCTTTGAAGCAAAGTCTGCTCTTACTGAAGCCTCCGTGACTAAAAAGGGTAATGAACTGATTGTTGATAGAAGTGTAAACAGTTCTGCAGCAATTACTTCTGTGGATAACTATAGTCCAATCAACAGCAGTCCTAGCAACGCCTATGTTAATAATCATCTAGAAGAAGCTCCAATGCAACTTCCAGAAACAACAATCAATGATGTTTCTTCCGAGGGCCTCATTGACATGAATGCACATCAAAGGTCAAAGCAAGATTTTGATGAACCAAGAACAAGCGAAGAAATTCTGCCAGTTGCATTAGATGATATACAGATTCATGAGGAAGACCCATAACCACCGGTAGCCGATGATGAGGCAGAGGAGGTTCCATTTTCTGATGCTCCAATCGTCGGTGCTCCATTCCGGTTGATTTCATTCGTTGCTAGGTATGTCAGTGGTGCTGATTTGGTGAACCAGAAGTAATTCTCCATTAATGCCATCAAGCAGCTTGAGATCTGTATTTCTTGGAAAGAGGAGTCTTCCTGTTTTGATTCTGCTCACACAGTTATCTCGCTAAGATTGTGAGGATGTATACGATGGATGCACTGAATTCAACAGAGATATGGAACCTCTGTTCAGTTCTTGGTAGTGTGCTCGTGTCACTACCAGTTTTTCTTCCTCCCCTGTCAATTTTTCAGGGGCAGCAGAAGCTCTTGTTCCCCAGTTATAGTGTTATACACACAAGAGGCCTTCCTGACCATGTGGGGTGTACTGACCATATTTATTCTACAGAAACTGAAAATTT                                                                                                                       ]
[+] EMBL CB637520             [                                                    ACCCCGCGCTCGCCTCGCTTCCCCC AAAAGTCTTCTCGTGAGAGCTTTCCCCCCCCTCCTCCACCCAACAAATCCCCAGCCTCCCAGATTCGTGGCGGAGGCTGCGGCCTGCGGCTGTTCTAGGGTTAGCTCTCGCTCCGCCGGCATTTCTCGGTAGATAAAGTATTGTAAGGGCTTGGGTTTGCAACCGGAGATGGATGCTAAAAAGAAGAGGAACAAGAAGAAGAAGGGGAACCAAGGGAAGAACACTGGTGATGTAACGTCCAGCACTGCAGAGGCTGCCATTCGGTCCCACAATCATGAGACAGCCCCTAATGACCATCATAATGGCACTGATGCTGATGATGCAATGTCCACTGTTGGAGAGGAAGCTCCTCAGTACCAGAATCATGAGCCAGATCGACAGGCAAATCATGATAGCACAAACACTGATGATGTCATGTCCTCTGTTGGAGAGGGGATTCCATTTCANAACCTTGACCCTGCCATGACACATGAAAATCACAAAGTCAGTAGTACAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF304870             [                                                                                                                                                                                                                   TAAAGTATTGTAAGGGCTTGGGTTTGCAACCGGAGATGGATGCTAAAAAGAAGAGGAACAAGAAGAAGAAGGGGAACCAAGGGAAGAACACTGGTGATGTAACGTCCAGCACTGCAGAGGCTGCCATTCGGTCCCACAATCATGAGACAGCCCCTAATGACCATCATAATGGCACTGATGCTGATGATGCAATGTCCACTGTTGGAGAGGAAGCTCCTCAGTACCAGAATCATGAGCCAGATCGACAGGCAAATCATGATAGCACAAACACTGATGATGTCATGTCCTCTGTTGGAGAGGGGATTCCATTTCAGAACCTTGACCCTGCCATGACACATGAAAATCACAAAGTCAGTAGTACAGCCCATGCTGATCAGAGGAGTGTTGAGATGTCAGATTCCACCGTGGAGCTTGACATGCACAGACTATATGAAGCAAAGCTTGATAAATTACATGATACGATAAAGAAGTTGGAAGATGAGAAGAGTTTGTGGCATCAAAAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB637521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGATGATATACAGATTCATGAGGAAGACCCACAACCACCGGTAGCCGATGATGAGGCAGAGGAGGTTCCATTTTCTGATGCTCCAATCGTCGGTGCTCCATTCCGGTTGATTTCATTCGTTGCTAGGTATGTCAGTGGTGCTGATTTGGTGAACCAGAAGTAATTCTCCATTAATGCCATCAAGCAGCTTGAGATCTGTATTTCTTGGAAAGAGGAGTCTTCCTGTTTTGATTCTGCTCACACAGTTATCTCGCTAAGATTGTGAGGATGTATACGATGGATGCACTGAATTCAACAGAGATATGGAACCTCTGTTCAGTTCTTGGTAGTGTGCTCGTGTCACTACCAGTTTTTCTTCCTCCCCTGTCAATTTTTCAGGGGCAGCAGAAGCTCTTGTTCCCCAGTTATAGTGTTATACACACAAGAGGCCTTCCTGACCATGTGGGGTGTACTGACCATATTTATTCTACAGAAACTGAAAATTTTTGGTATTCCAACAGATGTTTAATGCACTGAACAATGACCATGCATCTTGAAGAAAGTTGACCATTTGGATTTGATGTATTGCATTGATTGGATGGTTGCTAAAAAATGTTGTTTTGTC]




>consensus_7001#0
CCACCGGCAGTTACGCCTCCGCGCTCCTCCTTCCCAAGAGACGCAGATCTCCACCCCGCG
CTCGCCTCGCTTCCCCCAAAAAGTCTTCTCGTGAGAGCTTTCCCCCCCCTCCTCCACCCA
ACAAATCCCCAGCCTCCCAGATTCGTGGCGGAGGCTGCGGCCTGCGGCTGTTCTAGGGTT
AGCTCTCGCTCCGCCGGCATTTCTCGGTAGATAAAGTATTGTAAGGGCTTGGGTTTGCAA
CCGGAGATGGATGCTAAAAAGAAGAGGAACAAGAAGAAGAAGGGGAACCAAGGGAAGAAC
ACTGGTGATGTAACGTCCAGCACTGCAGAGGCTGCCATTCGGTCCCACAATCATGAGACA
GCCCCTAATGACCATCATAATGGCACTGATGCTGATGATGCAATGTCCACTGTTGGAGAG
GAAGCTCCTCAGTACCAGAATCATGAGCCAGATCGACAGGCAAATCATGATAGCACAAAC
ACTGATGATGTCATGTCCTCTGTTGGAGAGGGGATTCCATTTCAGAACCTTGACCCTGCC
ATGACACATGAAAATCACAAAGTCAGTAGTACAGCCCATGCTGATCAGAGGAGTGTTGAG
ATGTCAGATTCCACCGTGGAGCTTGACATGCACAGACTATATGAAGCAAAGCTTGATAAA
TTACATGATACGATAAAGAAGTTGGAAGATGAGAAGAGTTTGTGGCATCAAAAAATGAGC
TCCATGGAGATTGAGGTTGAAAAGTTGCATAACAAAGTGGATTATCATGCACAGAATGAG
GTCCGTTTGGAGGAAAAGCTCAATAATTTACAGAATGGGTATGATGTGCTGATTAAGAAG
GAGGTAGCTTTGGATAACAAAGTCAGGTCCATAGAGGTCATCAATGATGCCTTAACTCAT
CAGGAGACGTCTCTTAAAGAGAGATTAAGTGGACTGGAGGAGACAAATAAAGTACTGCTT
GTACAGGTGAAGGTGCTGGAGGAAGCTTCAAACAATACTGTTGAGGAAAGCCAGAGGTTG
GTAAAAGGTTTTGATGAACTGGCATCAAGATTAGGAGTCTTTGAAGCAAAGTCTGCTCTT
ACTGAAGCCTCCGTGACTAAAAAGGGTAATGAACTGATTGTTGATAGAAGTGTAAACAGT
TCTGCAGCAATTACTTCTGTGGATAACTATAGTCCAATCAACAGCAGTCCTAGCAACGCC
TATGTTAATAATCATCTAGAAGAAGCTCCAATGCAACTTCCAGAAACAACAATCAATGAT
GTTTCTTCCGAGGGCCTCATTGACATGAATGCACATCAAAGGTCAAAGCAAGATTTTGAT
GAACCAAGAACAAGCGAAGAAATTCTGCCAGTTGCATTAGATGATATACAGATTCATGAG
GAAGACCCATAACCACCGGTAGCCGATGATGAGGCAGAGGAGGTTCCATTTTCTGATGCT
CCAATCGTCGGTGCTCCATTCCGGTTGATTTCATTCGTTGCTAGGTATGTCAGTGGTGCT
GATTTGGTGAACCAGAAGTAATTCTCCATTAATGCCATCAAGCAGCTTGAGATCTGTATT
TCTTGGAAAGAGGAGTCTTCCTGTTTTGATTCTGCTCACACAGTTATCTCGCTAAGATTG
TGAGGATGTATACGATGGATGCACTGAATTCAACAGAGATATGGAACCTCTGTTCAGTTC
TTGGTAGTGTGCTCGTGTCACTACCAGTTTTTCTTCCTCCCCTGTCAATTTTTCAGGGGC
AGCAGAAGCTCTTGTTCCCCAGTTATAGTGTTATACACACAAGAGGCCTTCCTGACCATG
TGGGGTGTACTGACCATATTTATTCTACAGAAACTGAAAATTTTTGGTATTCCAACAGAT
GTTTAATGCACTGAACAATGACCATGCATCTTGAAGAAAGTTGACCATTTGGATTTGATG
TATTGCATTGATTGGATGGTTGCTAAAAAATGTTGTTTTGTC
clustalw multiple alignements is not computed in this case