cluster # 7006

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Oryza sativa
cluster # 7006 cluster # 7006 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7006#0 length = 612 sequences # 4

consensusID : consensus_7006#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 612
fasta sequence

                              [ATCATCCCATAAATCACAGGATGCTGCTGTGGGTTATCTTGTCCACATGCTGAAGTCTGCGCGGCCGCTGCGAGACTCTAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGGAGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATCCACCTTTGTTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTGCTGGAAGTATATGATGATCACCGTGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGTTTATTTATTCTATTTTAGCTCTTACCTTA-CTGCTCTTAATATACCAAACTGTTTGTTTATTGCTAAAAAAAA]

[+] EMBL AU174969             [ATCATCCCATAAATCACAGGATGCTGCTGTGGGTTATCTTGTCCACATGCTGAAGTCTGCGCGGCCGCTGCGAGACTCTAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGGAGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATT                                                                                                                                                                                                                          ]
[+] EMBL BF430816             [                                                                             CTAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGGAGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATCCACCTTTGCTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTCCTGGAAGTATATGATGATCACCGCGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGTTTATTTATTCTATTTTAGCTCTTACCTTACCTGCTCTTAATATACCAAACTGTTTGTTTATTGCTA       ]
[+] EMBL CB964552             [                                                                              TAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGGAGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATCCACCTTTGTTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTGCTGGAAGTATATGATGATCACCGTGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGTTTATTTATTCTATTTTAGCTCTTACCTTA CTGCTCTTAATATACCAAACT                      ]
[+] EMBL AU174968             [                                                                                                                                                            TGATGCGCTCGAGGAGCTTGAATCTTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATTGGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGGTTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCGCTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATCCACCTTTGTTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTGCTGGAAGTATATGATGATCACCGTGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGTTTATTTATTCTATTTTAGCTCTTACCTTA CTGCTCTTAATATACCAAACTGTTTGTTTATTGTTAAAAAAAA]




>consensus_7006#0
ATCATCCCATAAATCACAGGATGCTGCTGTGGGTTATCTTGTCCACATGCTGAAGTCTGC
GCGGCCGCTGCGAGACTCTAGCAATTCACCTCTTACATCAAGGGTTGAATCTGTTGAAGG
AGGTAATGTCAGTTCTTTCATGTCCCGTAGGACATCTGATGCGCTCGAGGAGCTTGAATC
TTTTAAAGAAATAAAGGAGAACCTGCTTGCCCGTAGTAGATCAAGGATGCAAGAGTCATT
GGATAAATCCTTGCGCCATTCTTAACATAGCTGGTGAAGTATCCCAACCATTTAAGGAGG
TTGTGTGGTAAGAGATGTTCTTACCGCGGGCATCTCCATGTGTATAACTGTCAACCGGCG
CTTGTTATGAAATGAGGATATACAAGTCGTTCATTCTTAAACTCAAGCAGGATCATGATC
CACCTTTGTTCATAGTGTTTTGTATGCAAGCAAAACCAACCGGATACATGCATCCTGCTG
GAAGTATATGATGATCACCGTGTGCGTACGTGTGGGATTATGTAATCATACTAAACCTGT
TTATTTATTCTATTTTAGCTCTTACCTTACTGCTCTTAATATACCAAACTGTTTGTTTAT
TGCTAAAAAAAA

clustalw multiple alignements is not computed in this case