cluster # 7011

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Oryza sativa
cluster # 7011 cluster # 7011 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7011#0 length = 717 sequences # 4

consensusID : consensus_7011#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 717
fasta sequence

                              [CACAAAAATCACTAAGCTCTCGCAGTGTCACTAGCCACTAGTGTGAGGTTACAAACCAAAGTTTTTTTTTCGTTGTGTCATGGCAAAGGCGCA-GCGGCGGCGAGGATCAT-GACAGAGGTGGCGCCGCCGCAGCTGGTGTCGGTGAT-CGGCGGAGGAAGCA-GTGGCGAGGAACCTCGACACGATCGCCGAGGACGACAGGGAGCTGATGCACCAGGCGCCCTACGCCGGCGACGGCCACCACCACGGCGTCAAGAAGCAGGCCGCAGCGACCAGCTCGGCGAGCACCTTCGCCACGCCGCCGTTGGCCTTCGAGCGGCAGCCACCGCCTGCGCCGGCGCCGGCGAGCGGGTTCATGAGGGGGCTCAGCAAGTGGTTCTCCAACAACGGCGTCCACGGC-CAGGAGGGGTGGCCGGAGATCAGCCGCGAAGGTCACCGGCGAGCCATCTATTCACAGCAGGCGCACATACGTGGGCACGCCACGGGATTGAATTCAAATTCATTAACTAGCTAGTCGAGTTTAGTACGTTTATCAAGATGAGATGTACCCAAGTACCCATATGCTTAGTTATGATGGATTAAGGCTTAAAACAATTTTGTCTCCTTGACAATAATAATATTTGCAAGACATA-GTTGTCCTCTGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGTACCGTAT]

[+] EMBL CA753235             [CACAAAAATCACTAAGCTCTCGCAGTGTCACTAGCCACTAGTGTGAGGTTACAAACCAAAGTTTTTTTTTCGTTGTGTCATGGCAAAGGCGCAGGCGGCGGCGAGGATCAT GACAGAGGTGGCGCCGCCGCAGCTGGTGTCGGTGATGCGGCGGAGGAAGCAGGTGGCGAGGAACCTCGACACGATCGCCGAGGACGACAGGGAGCTGATGCACCAGGCGCCCTACGCCGGCGACGGCCACCACCACGGCGTCAAGAAGCAGGCCGCAGCGACCAGCTCGGCGAGCACCTTCGCCACGCCGCCGTTGGCCTTCGAGCGGCAGCCACCGCCTGCGCCGGCGCCGGCGAGCGGGTTCATGAGGGGGCTCAGCAAGTGGTTCTCCAACAACGGCGTCCACGGC CAGGAGGGGTGGGCCGAGATCAGCCcgcc                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BQ908414             [                                                                              ccgGGCAAAGGCGCA GCGGCGGCGAGGATCAT GACAGAGGTGGCGCCGCCGCAGCTGGTGTCGGTGAT CGGCGGAGGAAGCA GTGGCGAGGAACCTCGACACGATCGCCGAGGACGACAGGGAGCTGATGCACCAGGCGCCCTACGCCGGCGACGGCCACCACCACGGCGTCAAGAAGCAGGCCGCAGCGACCAGCTCGGCGAGCACCTTCGCCACGCCGCCGTTGGCCTTCGAGCGGCAGCCACCGCCTGCGCCGGCGCCGGCGAGCGGGTTCATGAGGGGGCTCAGCAAGTGGTTCTCCAACAACGGCGTCCACGGC CAGGAGGGGTGGCCGGAGATCAGCCGCGAAGGTCACCGGCGAGCCATCTATTCACAGCAGGCGCACATACGTGGGCACGCCACGGGATTGAATTCAAATTCATTAACTAGCTAGTCGAGTTTAGTACGTTTATCAAGATGAGATGTACCCAAGTACCCATATGCTTAGTTATGATGGATTAAGGCTTAAAACAATTTTGTCTCCTTGACAATAATAATATTTGCAAGACATA GTTGTCCTCTGAAACAAAAAA                                                                   ]
[+] EMBL BI802894             [                                                                                                 GCGGCGAGTATCATCGACAGAGGTGGC CC CCCCAGCT GT TC GTAAT CGCCGGAGGAACCA GT GCGAGGAACCTCGACACGATCGCCGAGGACGACAGGGAGCTGATGCACCAGGCGCCCTACGCCGGCGACGGCCACCACCACGGCGTCAAGAAGCAGGCCGCAGCGACCAGCTCGGCGAGCACCTTCGCCACGCCGCCGTTGGCCTTCGAGCGGCAGCCACCGCCTGCGCCGGCGCCGGCGAGCGGGTTCATGAGGGGGCTCAGCAAGTGGTTCTCCAACAACGGCGTCCACGACACAGGAGGGGTGGCCGGAGATCAGCCGCGAAGGTCACCGGCGAGCCATCTATTCACAGCAGGCGCACATACGTGGGCACGCCACGGGATTGAATTCAAATTCATTAACTAGCTAGTCGAGTTTAGTACGTTTATCAAGATGAGATGTACCCAAGTACCCCTACGCTTAGTTATGATGGATTAAGGCTTAAAA                                                                                                                                  ]
[+] EMBL CF308518             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCACGGGATTGAATTCAAGTTCATTAACTAGCTAGTCGAGTTTAGTACGTTTATCAAGATGAGATGTACCCAAGTACCCATATGCTTAGTTATGATGAATTAAGGCTTAAAACAATTTTGTCTCCTTGACAATAATAATATTTGCAAGACATATGTTGTCCTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGTACCGTAT]




>consensus_7011#0
CACAAAAATCACTAAGCTCTCGCAGTGTCACTAGCCACTAGTGTGAGGTTACAAACCAAA
GTTTTTTTTTCGTTGTGTCATGGCAAAGGCGCAGCGGCGGCGAGGATCATGACAGAGGTG
GCGCCGCCGCAGCTGGTGTCGGTGATCGGCGGAGGAAGCAGTGGCGAGGAACCTCGACAC
GATCGCCGAGGACGACAGGGAGCTGATGCACCAGGCGCCCTACGCCGGCGACGGCCACCA
CCACGGCGTCAAGAAGCAGGCCGCAGCGACCAGCTCGGCGAGCACCTTCGCCACGCCGCC
GTTGGCCTTCGAGCGGCAGCCACCGCCTGCGCCGGCGCCGGCGAGCGGGTTCATGAGGGG
GCTCAGCAAGTGGTTCTCCAACAACGGCGTCCACGGCCAGGAGGGGTGGCCGGAGATCAG
CCGCGAAGGTCACCGGCGAGCCATCTATTCACAGCAGGCGCACATACGTGGGCACGCCAC
GGGATTGAATTCAAATTCATTAACTAGCTAGTCGAGTTTAGTACGTTTATCAAGATGAGA
TGTACCCAAGTACCCATATGCTTAGTTATGATGGATTAAGGCTTAAAACAATTTTGTCTC
CTTGACAATAATAATATTTGCAAGACATAGTTGTCCTCTGAAACAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGTACCGTAT

clustalw multiple alignements is not computed in this case