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Oryza sativa
cluster # 7025 cluster # 7025       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7025#0 length = 1598 sequences # 4  

consensusID : consensus_7025#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1598
fasta sequence
                              [TCGGCCGTCGCGCGCCG-CGC-AA-CCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCGGCGGCGGCGCCACCACCGTCCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCACCTCGCCCACCGTCTCCTCCTCTCCCTCCCCTCCCCATCCCTCGAC-CTCTTCAACCTCCTCCTTCCCCCGCTCGCCTCCTCGCCGGACCCCTCCACCGCCGCCGCCCTCTTCCTTCGCCTCCGCCGCGGGGGTCTCCGCCCCGACGCGCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTCGCCCCGGGATCCCTCCCCGTTGTCGGATCCGTGCACTCGGAGGCCGTCAAGGACGGCCTCGCCTCCGCGGTGGTGTACGTCCCGAACGCGCTCATGGCCGCGTACTCGGCCTGTGGGCAACTGGAGCGCGCCGTGCAGGTGTTCGACGAAATGCCGCGCCGGACCGTCGTGTCCTGGAACACCGCGCTCACCGCCTGCGCGGGCAACGGCCGCCACGAGCTGTGCGTCGAGCTGTTCGCGGAGATGCTAGAGGCTGGTTCCGTGCCGGACCCGACCACGTTCGTGGTCATGCTGTCCGCCGCGGCCGAGCTGGGCAACCTGGCGCTCGGCAAGTGGGCGCATGGACAGGTTGTTTCCCGGAGGCTGGACATGACGCTTCAGCTTGGGACGGCGGCAGTGAACATGTACTCCAAGTGTGCCACGGTGAGTTATGCCCTGCGCTTGTTCGAGAGGATGCCCGCGAGGAATGTCTGGACATGGACTGCCATGATCGTAGGGTTTGCGCAGAATGGTTTGGCTCAGGAAGCGCTGGAGCTGTTTGACAGGATGAAACTCTCAAAGATCATACCCAATTATGTCACATTTCTTGGTCTGCTTTGTGCATGTAGCCATGCTGGCCTGGTTGATGAGGGGCGCCGGTTCTTCCACGAAATGCAGCATGTTTATGGTATTGTGCCGATGATGACGCACTACAGCGCCATGGTTGATGTCCTAGGCCGCAACGGTCTTCTCCAGGAAGCTTATGACTTTGTTGTAGGAATGCCAGTCGAGGCTGACCCAGTTGTGTGGAGGACATTATTGGCAGCCTGCCAGCTGCATAGCTCCAAGGACTGTATTGAGATCATTGACAAGGTGCAGGGCAAACTGCTGGAGCTAGAGCCCCGGAGAAGCGGGAACTACGTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATCTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGATGATGCTGACTAGCTTTCAAATTTCGTGCATTCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C74579               [TCGGCCGTCGCGCGCCGNCGCNAANCCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCNG NGCGGCGCCACCACCGTNCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCAACTCG CCACCGTCTCCTCCTCTCCCT CCCTCCCAATCCTTCGACTCT TTCAAacntctt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK102254             [              CCG CGC AA CCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCGGCGGCGGCGCCACCACCGTCCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCACCTCGCCCACCGTCTCCTCCTCTCCCTCCCCTCCCCATCCCTCGAC CTCTTCAACCTCCTCCTTCCCCCGCTCGCCTCCTCGCCGGACCCCTCCACCGCCGCCGCCCTCTTCCTTCGCCTCCGCCGCGGGGGTCTCCGCCCCGACGCGCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTCGCCCCGGGATCCCTCCCCGTTGTCGGATCCGTGCACTCGGAGGCCGTCAAGGACGGCCTCGCCTCCGCGGTGGTGTACGTCCCGAACGCGCTCATGGCCGCGTACTCGGCCTGTGGGCAACTGGAGCGCGCCGTGCAGGTGTTCGACGAAATGCCGCGCCGGACCGTCGTGTCCTGGAACACCGCGCTCACCGCCTGCGCGGGCAACGGCCGCCACGAGCTGTGCGTCGAGCTGTTCGCGGAGATGCTAGAGGCTGGTTCCGTGCCGGACCCGACCACGTTCGTGGTCATGCTGTCCGCCGCGGCCGAGCTGGGCAACCTGGCGCTCGGCAAGTGGGCGCATGGACAGGTTGTTTCCCGGAGGCTGGACATGACGCTTCAGCTTGGGACGGCGGCAGTGAACATGTACTCCAAGTGTGCCACGGTGAGTTATGCCCTGCGCTTGTTCGAGAGGATGCCCGCGAGGAATGTCTGGACATGGACTGCCATGATCGTAGGGTTTGCGCAGAATGGTTTGGCTCAGGAAGCGCTGGAGCTGTTTGACAGGATGAAACTCTCAAAGATCATACCCAATTATGTCACATTTCTTGGTCTGCTTTGTGCATGTAGCCATGCTGGCCTGGTTGATGAGGGGCGCCGGTTCTTCCACGAAATGCAGCATGTTTATGGTATTGTGCCGATGATGACGCACTACAGCGCCATGGTTGATGTCCTAGGCCGCAACGGTCTTCTCCAGGAAGCTTATGACTTTGTTGTAGGAATGCCAGTCGAGGCTGACCCAGTTGTGTGGAGGACATTATTGGCAGCCTGCCAGCTGCATAGCTCCAAGGACTGTATTGAGATCATTGACAAGGTGCAGGGCAAACTGCTGGAGCTAGAGCCCCGGAGAAGCGGGAACTACGTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATCTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGATGATGCTG                                                           ]
[+] EMBL AK102867             [                       A CCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCATCGCCGGCGGCGGCGGCGCCACCACCGTCCCCCATCTCCGGCAGATCCACGCCCATCTCCTCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGCCCAATCCCCACCTCCACCTCGCCCACCGTCTCCTCCTCTCCCTCCCCTCCCCATCCCTCGAC CTCTTCAACCTCCTCCTTCCCCCGCTCGCCTCCTCGCCGGACCCCTCCACCGCCGCCGCCCTCTTCCTTCGCCTCCGCCGCGGGGGTCTCCGCCCCGACGCGCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTCGCCCCGGGATCCCTCCCCGTTGTCGGATCCGTGCACTCGGAGGCCGTCAAGGACGGCCTCGCCTCCGCGGTGGTGTACGTCCCGAACGCGCTCATGGCCGCGTACTCGGCCTGTGGGCAACTGGAGCGCGCCGTGCAGGTGTTCGACGAAATGCCGCGCCGGACCGTCGTGTCCTGGAACACCGCGCTCACCGCCTGCGCGGGCAACGGCCGCCACGAGCTGTGCGTCGAGCTGTTCGCGGAGATGCTAGAGGCTGGTTCCGTGCCGGACCCGACCACGTTCGTGGTCATGCTGTCCGCCGCGGCCGAGCTGGGCAACCTGGCGCTCGGCAAGTGGGCGCATGGACAGGTTGTTTCCCGGAGGCTGGACATGACGCTTCAGCTTGGGACGGCGGCAGTGAACATGTACTCCAAGTGTGCCACGGTGAGTTATGCCCTGCGCTTGTTCGAGAGGATGCCCGCGAGGAATGTCTGGACATGGACTGCCATGATCGTAGGGTTTGCGCAGAATGGTTTGGCTCAGGAAGCGCTGGAGCTGTTTGACAGGATGAAACTCTCAAAGATCATACCCAATTATGTCACATTTCTTGGTCTGCTTTGTGCATGTAGCCATGCTGGCCTGGTTGATGAGGGGCGCCGGTTCTTCCACGAAATGCAGCATGTTTATGGTATTGTGCCGATGATGACGCACTACAGCGCCATGGTTGATGTCCTAGGCCGCAACGGTCTTCTCCAGGAAGCTTATGACTTTGTTGTAGGAATGCCAGTCGAGGCTGACCCAGTTGTGTGGAGGACATTATTGGCAGCCTGCCAGCTGCATAGCTCCAAGGACTGTATTGAGATCATTGACAAGGTGCAGGGCAAACTGCTGGAGCTAGAGCCCCGGAGAAGCGGGAACTACGTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATCTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGATGATGCTG                                                           ]
[+] EMBL AU094848             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTCATGGTTTCAAACATCTACTGCGAAATTGGATCATGGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGGGAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTTGCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATNTCAACATGAGAAAATGTGAACCTATTGACCCAATCTTATTTACTGATGATGCTGACTAGCTTTCAAATTTCGTGCATTCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_7025#0 TCGGCCGTCGCGCGCCGCGCAACCTCCATGGAATGGCCGCTCTCCACCTCCACGCCCTCA TCGCCGGCGGCGGCGGCGCCACCACCGTCCCCCATCTCCGGCAGATCCACGCCCATCTCC TCACCTCCGGCCGCTTCCCCTCCCTCGGCCCCGTCCTCCTCCGCCGCCTCATTTCGCTGC CCAATCCCCACCTCCACCTCGCCCACCGTCTCCTCCTCTCCCTCCCCTCCCCATCCCTCG ACCTCTTCAACCTCCTCCTTCCCCCGCTCGCCTCCTCGCCGGACCCCTCCACCGCCGCCG CCCTCTTCCTTCGCCTCCGCCGCGGGGGTCTCCGCCCCGACGCGCACACGCTCCCGCACG TCCTCAAGGCGCTCGCGCGCCTCGCCCCGGGATCCCTCCCCGTTGTCGGATCCGTGCACT CGGAGGCCGTCAAGGACGGCCTCGCCTCCGCGGTGGTGTACGTCCCGAACGCGCTCATGG CCGCGTACTCGGCCTGTGGGCAACTGGAGCGCGCCGTGCAGGTGTTCGACGAAATGCCGC GCCGGACCGTCGTGTCCTGGAACACCGCGCTCACCGCCTGCGCGGGCAACGGCCGCCACG AGCTGTGCGTCGAGCTGTTCGCGGAGATGCTAGAGGCTGGTTCCGTGCCGGACCCGACCA CGTTCGTGGTCATGCTGTCCGCCGCGGCCGAGCTGGGCAACCTGGCGCTCGGCAAGTGGG CGCATGGACAGGTTGTTTCCCGGAGGCTGGACATGACGCTTCAGCTTGGGACGGCGGCAG TGAACATGTACTCCAAGTGTGCCACGGTGAGTTATGCCCTGCGCTTGTTCGAGAGGATGC CCGCGAGGAATGTCTGGACATGGACTGCCATGATCGTAGGGTTTGCGCAGAATGGTTTGG CTCAGGAAGCGCTGGAGCTGTTTGACAGGATGAAACTCTCAAAGATCATACCCAATTATG TCACATTTCTTGGTCTGCTTTGTGCATGTAGCCATGCTGGCCTGGTTGATGAGGGGCGCC GGTTCTTCCACGAAATGCAGCATGTTTATGGTATTGTGCCGATGATGACGCACTACAGCG CCATGGTTGATGTCCTAGGCCGCAACGGTCTTCTCCAGGAAGCTTATGACTTTGTTGTAG GAATGCCAGTCGAGGCTGACCCAGTTGTGTGGAGGACATTATTGGCAGCCTGCCAGCTGC ATAGCTCCAAGGACTGTATTGAGATCATTGACAAGGTGCAGGGCAAACTGCTGGAGCTAG AGCCCCGGAGAAGCGGGAACTACGTCATGGTTTCAAACATCTACTGCGAAATTGGATCAT GGGACGAGGCAGCGAAGGCAAGGAGGGTGATGAGGGAAGGAGGGATGAAGAAGGTTGCGG GAGAGAGTTGTGTTGAGGTGGGAGGACGGGTGCATCGGTTCATCTTCGGGGATGATTCTT GCCCTGAATTTCATGGGGCTTGTAGGATTCTCCATGAATTGAATCTCAACATGAGAAAAT GTGAACCTATTGACCCAATCTTATTTACTGATGATGCTGACTAGCTTTCAAATTTCGTGC ATTCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)