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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7046#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2324 fasta sequence
[TCGCATCCCGTCTACTGACCACACACGGCCGGACGGAAGACCCGAACCGTATCGCCTCCACAATCCATCCCCCAGAACCATACCACGCGTTCCCGTTCCCCTCCTAAATACTCGATCAATATCAATCAATCTCCGCCAACTCCCTCGAATCGCTCCTGAATAACTTAGTTTTCTCTTGTTAGATTAGGGTTTCGAGTCTTTCGACGTCCTGCTTGCTTGCAGGGAGATTCTGATGCCGAAGAAGCCGTCGCTGTCGCGGGTTGCTTCAGAGACGCGGCTGCTGTTTTCTAGCTGGGAACCTGAATCCCCGTTGGATGCTACCAGCGGATCCGGAAAAGATGCACCCGCCGATCAACAGGAAGGCGACGGGAAGCGGGGCCGACAACGCTCGCCTGGTGACGAAGCGAGGTCATTGAAGGATCGATTCAAGGGTCGATTGAAGGAGGGCGTTGCTTCAGCCCGATTGAAGTGTTTAGACACACTATTGAATGAGTCGAGGGATTTATCGCAGGGGAATGAGTCCAAGGGGAATTTGTTGAAGAGCCTCATTCAAAAGGCAGAGTTGGATTTGTGGCAGGTGAAGGAACTGGAAACCGATCCCACGTCCGGTGCTAGCCAATCCAAAGAAGAAGCTTCTGCTGCAGCTTCTGATGGACAGGGAGACGATAAGGAAAGGGGTGACTTGCAAGCAGTCGAGGCCTATGGTTCTCCTCCTGGTAAGGAGAAGGTTGACTTGCAAGCAGCTAAGGACTCTTCTCCCACTGCTGGGAGGAAGGGAAAGGGCAAGCGTATTATAGGGTATGAAGCACAACAGAAGGAAAGCAACATTCAAGATGTTAAAACATCAAGTCAACAAGAAACTAGAAAGCCAAAGAGGAAGAAGCAGAAGAAGAGGCAGAGGCGCAAGATGGAGGAATCCACGGAAAATCTATCATGCCGCAGTGGCAGCAGCCCATCCTCTTCTCATGATGCAACAAGCACATCGACAATAGAGGGGGAGCCAGAACAACCATCTTTTGGGGATCTTGCGAGCATTGCACAAGACCATGATGACAAGATTGCATCTGACGTTGTTGACATCAAACAAGAACAAGAATCAGCAGAAGATATCCTAGCTCTCCTCGACATGATGGATAAGGATGCCATCCAAGAAAAATTCAATTACTATCTCAAGCAGCTGGGCTTTGAGTCAAATGAGTATGATTTTTGGTCTGAAACCTATGAGCCAGAGCAACTCACTGCGTTGCACGAGCGGTTAGCCATCTACCGCATCGTAGGTTATGAGCTATCAAAGGGTAGGAAGCTTGGCAAACAGGATATTGCAAAACTGAAAGAGCAGTACAATCCGTCCATTCTTCGTAAGGAAGGATACTTCCGGCACTATGAGGAGAGTCTTGAGTGGTACTTCGATCTTGAATGGTGCAAGTACTCTGGTTTTCAAGACTATCAGCGGCTAGTGCTTCATGATAATGTTGAGTTCTTAGAGTGGGAGCATTACCACTTAAATTATAATACCTATGAGGATGATCTAGCATATGTCAGGTATCGTGCACGCTTAGCAAATGAGACTAAGTGGATTGAAGATTATCTGGCCCGTGACATAACTCAGGCTGAGTGGCGTAGGGTTAAGGATATAGCTTCAGTTCAAGCACTGAAGATTGCAAGAGTCTCTGGTGGTGTCAAGGCACAGGCAGCTTTGGCTGGTTTCAGAGATCATATATGGAGCATTCAGTTTGATTTCAATCACTATAAGGATTTTGATGGTGTTTACTTCAAGATTTGGAAGCGGGTTGCTAAGAGAAAGATGAATTTTAGAGAAGCTTTGTTGGAAGTGTATAGAGAAGATATGTTTCCTGTGCGCAAGAATGGTATTAAGTACGAACTTGATAATACTCAACTAAGATTCAAGTCGATGAAAGAAAAGTATGATGCCCACGTGGCTTGCCTTGATGAGTCGGTGCCAGAAGATGAAGTTCGTCAGTTGATCAAAGAGGCCGTTATAAAAATGAAACCAAAACCACATACCTATTTGGACTACGCCAGGAAGAAGTTACAGATATCAATGAATATCGATTTGATTACCAAAAGTACGTGTACTCTTCTCAATTATCAAACATGATTCAATGCTAATCAATGCCGTTTGAAAGAATTTTAGCTTTCTTAGTCTGAGAAATATGTCTTTCGTTTGAATTCAATAACTAGTAATCTGTCCGTGCTAATGCTATGGTGACATTTAGTAATCGTCTGCATGTAACGCTTATCATCATGAACATAAATTAATTTGAACATTTGCAAGAATCTGATTATCGTTTGAAATACTATCG]
[+] EMBL AK105434 [TCGCATCCCGTCTACTGACCACACACGGCCGGACGGAAGACCCGAACCGTATCGCCTCCACAATCCATCCCCCAGAACCATACCACGCGTTCCCGTTCCCCTCCTAAATACTCGATCAATATCAATCAATCTCCGCCAACTCCCTCGAATCGCTCCTGAATAACTTAGTTTTCTCTTGTTAGATTAGGGTTTCGAGTCTTTCGACGTCCTGCTTGCTTGCAGGGAGATTCTGATGCCGAAGAAGCCGTCGCTGTCGCGGGTTGCTTCAGAGACGCGGCTGCTGTTTTCTAGCTGGGAACCTGAATCCCCGTTGGATGCTACCAGCGGATCCGGAAAAGATGCACCCGCCGATCAACAGGAAGGCGACGGGAAGCGGGGCCGACAACGCTCGCCTGGTGACGAAGCGAGGTCATTGAAGGATCGATTCAAGGGTCGATTGAAGGAGGGCGTTGCTTCAGCCCGATTGAAGTGTTTAGACACACTATTGAATGAGTCGAGGGATTTATCGCAGGGGAATGAGTCCAAGGGGAATTTGTTGAAGAGCCTCATTCAAAAGGCAGAGTTGGATTTGTGGCAGGTGAAGGAACTGGAAACCGATCCCACGTCCGGTGCTAGCCAATCCAAAGAAGAAGCTTCTGCTGCAGCTTCTGATGGACAGGGAGACGATAAGGAAAGGGGTGACTTGCAAGCAGTCGAGGCCTATGGTTCTCCTCCTGGTAAGGAGAAGGTTGACTTGCAAGCAGCTAAGGACTCTTCTCCCACTGCTGGGAGGAAGGGAAAGGGCAAGCGTATTATAGGGTATGAAGCACAACAGAAGGAAAGCAACATTCAAGATGTTAAAACATCAAGTCAACAAGAAACTAGAAAGCCAAAGAGGAAGAAGCAGAAGAAGAGGCAGAGGCGCAAGATGGAGGAATCCACGGAAAATCTATCATGCCGCAGTGGCAGCAGCCCATCCTCTTCTCATGATGCAACAAGCACATCGACAATAGAGGGGGAGCCAGAACAACCATCTTTTGGGGATCTTGCGAGCATTGCACAAGACCATGATGACAAGATTGCATCTGACGTTGTTGACATCAAACAAGAACAAGAATCAGCAGAAGATATCCTAGCTCTCCTCGACATGATGGATAAGGATGCCATCCAAGAAAAATTCAATTACTATCTCAAGCAGCTGGGCTTTGAGTCAAATGAGTATGATTTTTGGTCTGAAACCTATGAGCCAGAGCAACTCACTGCGTTGCACGAGCGGTTAGCCATCTACCGCATCGTAGGTTATGAGCTATCAAAGGGTAGGAAGCTTGGCAAACAGGATATTGCAAAACTGAAAGAGCAGTACAATCCGTCCATTCTTCGTAAGGAAGGATACTTCCGGCACTATGAGGAGAGTCTTGAGTGGTACTTCGATCTTGAATGGTGCAAGTACTCTGGTTTTCAAGACTATCAGCGGCTAGTGCTTCATGATAATGTTGAGTTCTTAGAGTGGGAGCATTACCACTTAAATTATAATACCTATGAGGATGATCTAGCATATGTCAGGTATCGTGCACGCTTAGCAAATGAGACTAAGTGGATTGAAGATTATCTGGCCCGTGACATAACTCAGGCTGAGTGGCGTAGGGTTAAGGATATAGCTTCAGTTCAAGCACTGAAGATTGCAAGAGTCTCTGGTGGTGTCAAGGCACAGGCAGCTTTGGCTGGTTTCAGAGATCATATATGGAGCATTCAGTTTGATTTCAATCACTATAAGGATTTTGATGGTGTTTACTTCAAGATTTGGAAGCGGGTTGCTAAGAGAAAGATGAATTTTAGAGAAGCTTTGTTGGAAGTGTATAGAGAAGATATGTTTCCTGTGCGCAAGAATGGTATTAAGTACGAACTTGATAATACTCAACTAAGATTCAAGTCGATGAAAGAAAAGTATGATGCCCACGTGGCTTGCCTTGATGAGTCGGTGCCAGAAGATGAAGTTCGTCAGTTGATCAAAGAGGCCGTTATAAAAATGAAACCAAAACCACATACCTATTTGGACTACGCCAGGAAGAAGTTACAGATATCAATGAATATCGATTTGATTACCAAAAGTACGTGTACTCTTCTCAATTATCAAACATGATTCAATGCTAATCAATGCCGTTTGAAAGAATTTTAGCTTTCTTAGTCTGAGAAATATGTCTTTCGTTTGAATTCAATAACTAGTAATCTGTCCGTGCTAATGCTATGGTGACATTTAGTAATCGTCTGCATGTAACGCTTATCATCATGAACATAAATTAATTTGAACATTTGCAAGAATCTGATTATCGTTTGAAATACTATCG]
consensusID : consensus_7046#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2283 fasta sequence
[TCTACTGACCACACACGGCCGGACGGAAGACCCGAACCGTATCGCCTCCACAATCCATCCCCCAGAACCATACCACGCGTTCCCGTTCCCCTCCTAAATACTCGATCAATATCAATCAATCTCCGCCAACTCCCTCGAATCGCTCCTGAATAACTTAGTTTTCTCTTGTTAGATTAGGGTTTCGAGTCTTTCGACGTCCTGCTTGCTTGCAGGGAGATTCTGATGCCGAAGAAGCCGTCGCTGTCGCGGGTTGCTTCAGAGACGCGGCTGCTGTTTTCTAGCTGGGAACCTGAATCCCCGTTGGATGCTACCAGCGGATCCGGAAAAGATGCACCCGCCGATCAACAGGAAGGCGACGGGAAGCGGGGCCGACAACGCTCGCCTGGTGACGAAGCGAGGCCTAAGCGGCAGCGCAAGACGAAGAAGAAGAATAAGAAGCAGTTGGATTTATTGGAGCGGGAGGACGATCCCCTAATCCAATTGAGGTCATTGAAGGATCGATTCAAGGGTCGATTGAAGGAGGGCGTTGCTTCAGCCCGATTGAAGTGTTTAGACACACTATTGAATGAGTCGAGGGATTTATCGCAGGGGAATGAGTCCAAGGGGAATTTGTTGAAGAGCCTCATTCAAAAGGCAGAGTTGGATTTGTGGCAGGTGAAGGAACTGGAAACCGATCCCACGTCCGGTGCTAGCCAATCCAAAGAAGAAGCTTCTGCTGCAGCTTCTGATGGACAGGGAGACGATAAGGAAAGGGGTGACTTGCAAGCAGTCGAGGCCTATGGTTCTCCTCCTGGTAAGGAGAAGGTTGACTTGCAAGCAGCTAAGGACTCTTCTCCCACTGCTGGGAGGAAGGGAAAGGGCAAGCGTATTATAGGGTATGAAGCACAACAGAAGGAAAGCAACATTCAAGATGTTAAAACATCAAGTCAACAAGAAACTAGAAAGCCAAAGAGGAAGAAGCAGAAGAAGAGGCAGAGGCGCAAGATGGAGGAATCCACGGAAAATCTATCATGCCGCAGTGGCAGCAGCCCATCCTCTTCTCATGATGCAACAAGCACATCGACAATAGAGGGGGAGCCAGAACAACCATCTTTTGGGGATCTTGCGAGCATTGCACAAGACCATGATGACAAGATTGCATCTGACGTTGTTGACATCAAACAAGAACAAGAATCAGCAGAAGATATCCTAGCTCTCCTCGACATGATGGATAAGGATGCCATCCAAGAAAAATTCAATTACTATCTCAAGCAGCTGGGCTTTGAGTCAAATGTGTATGATTTTTGGTCTGAAACCTATGAGCCAGAGCAACTCACTGCGTTGCACGAGCGGTTAGCCATCTACCGCATCGTAGGTTATGAGCTATCAAAGGGTAGGAAGCTTGGCAAACAGGATATTGCAAAACTGAAAGAGCAGTACAATCCGTCCATTCTTCGTAAGGAAGGATACTTCCGGCACTATGAGGAGAGTCTTGAGTGGTACTTCGATCTTGAATGGTGCAAGTACTCTGGTTTTCAAGACTATCAGCGGCTAGTGCTTCATGATAATGTTGAGTTCTTAGAGTGGGAGCATTACCACTTAAATTATAATACCTATGAGGATGATCTAGCATATGTCAGGTATCGTGCACGCTTAGCAAATGAGACTAAGTGGATTGAAGATTATCTGGCCCGTGACATAACTCAGGCTGAGTGGCGTAGGGTTAAGGATATAGCTTCAGTTCAAGCACTGAAGATTGCAAGAGTCTCTGGTGGTGTCAAGGCACAGGCAGCTTTGGCTGGTTTCAGAGATCATATATGGAGCATTCAGTTTGATTTCAATCACTATAAGGATTTTGATGGTGTTTACTTCAAGATTTGGAAGCGGGTTGCTAAGAGAAAGATGAATTTTAGAGAAGCTTTGTTGGAAGTGTATAGAGAAGATATGTTTCCTGTGCGCAAGAATGGTATTAAGTACGAACTTGATAATACTCAACTAAGATTCAAGTCGATGAAAGAAAAGTATGATGCCCACGTGGCTTGCCTTGATGAGTCGGTGCCAGAAGATGAAGTTCGTCAGTTGATCAAAGAGGCCGTTATAAAAATGAAACCAAAACCACATACCTATTTGGACTACGCCAGGAAGAAGTTACAGATATCAATGAATATCGATTTGATTACCAAAAGTACGTGTACTCTTCTCAATTATCAAACATGATTCAATGCTAATCAATGCCGTTTGAAAGATTTTTAGCTTTCTTAGTCTGAGAAATATGTCTTTCGTTTGAATTCAATAACTAGTAAT]
[+] EMBL AK103535 [TCTACTGACCACACACGGCCGGACGGAAGACCCGAACCGTATCGCCTCCACAATCCATCCCCCAGAACCATACCACGCGTTCCCGTTCCCCTCCTAAATACTCGATCAATATCAATCAATCTCCGCCAACTCCCTCGAATCGCTCCTGAATAACTTAGTTTTCTCTTGTTAGATTAGGGTTTCGAGTCTTTCGACGTCCTGCTTGCTTGCAGGGAGATTCTGATGCCGAAGAAGCCGTCGCTGTCGCGGGTTGCTTCAGAGACGCGGCTGCTGTTTTCTAGCTGGGAACCTGAATCCCCGTTGGATGCTACCAGCGGATCCGGAAAAGATGCACCCGCCGATCAACAGGAAGGCGACGGGAAGCGGGGCCGACAACGCTCGCCTGGTGACGAAGCGAGGCCTAAGCGGCAGCGCAAGACGAAGAAGAAGAATAAGAAGCAGTTGGATTTATTGGAGCGGGAGGACGATCCCCTAATCCAATTGAGGTCATTGAAGGATCGATTCAAGGGTCGATTGAAGGAGGGCGTTGCTTCAGCCCGATTGAAGTGTTTAGACACACTATTGAATGAGTCGAGGGATTTATCGCAGGGGAATGAGTCCAAGGGGAATTTGTTGAAGAGCCTCATTCAAAAGGCAGAGTTGGATTTGTGGCAGGTGAAGGAACTGGAAACCGATCCCACGTCCGGTGCTAGCCAATCCAAAGAAGAAGCTTCTGCTGCAGCTTCTGATGGACAGGGAGACGATAAGGAAAGGGGTGACTTGCAAGCAGTCGAGGCCTATGGTTCTCCTCCTGGTAAGGAGAAGGTTGACTTGCAAGCAGCTAAGGACTCTTCTCCCACTGCTGGGAGGAAGGGAAAGGGCAAGCGTATTATAGGGTATGAAGCACAACAGAAGGAAAGCAACATTCAAGATGTTAAAACATCAAGTCAACAAGAAACTAGAAAGCCAAAGAGGAAGAAGCAGAAGAAGAGGCAGAGGCGCAAGATGGAGGAATCCACGGAAAATCTATCATGCCGCAGTGGCAGCAGCCCATCCTCTTCTCATGATGCAACAAGCACATCGACAATAGAGGGGGAGCCAGAACAACCATCTTTTGGGGATCTTGCGAGCATTGCACAAGACCATGATGACAAGATTGCATCTGACGTTGTTGACATCAAACAAGAACAAGAATCAGCAGAAGATATCCTAGCTCTCCTCGACATGATGGATAAGGATGCCATCCAAGAAAAATTCAATTACTATCTCAAGCAGCTGGGCTTTGAGTCAAATGTGTATGATTTTTGGTCTGAAACCTATGAGCCAGAGCAACTCACTGCGTTGCACGAGCGGTTAGCCATCTACCGCATCGTAGGTTATGAGCTATCAAAGGGTAGGAAGCTTGGCAAACAGGATATTGCAAAACTGAAAGAGCAGTACAATCCGTCCATTCTTCGTAAGGAAGGATACTTCCGGCACTATGAGGAGAGTCTTGAGTGGTACTTCGATCTTGAATGGTGCAAGTACTCTGGTTTTCAAGACTATCAGCGGCTAGTGCTTCATGATAATGTTGAGTTCTTAGAGTGGGAGCATTACCACTTAAATTATAATACCTATGAGGATGATCTAGCATATGTCAGGTATCGTGCACGCTTAGCAAATGAGACTAAGTGGATTGAAGATTATCTGGCCCGTGACATAACTCAGGCTGAGTGGCGTAGGGTTAAGGATATAGCTTCAGTTCAAGCACTGAAGATTGCAAGAGTCTCTGGTGGTGTCAAGGCACAGGCAGCTTTGGCTGGTTTCAGAGATCATATATGGAGCATTCAGTTTGATTTCAATCACTATAAGGATTTTGATGGTGTTTACTTCAAGATTTGGAAGCGGGTTGCTAAGAGAAAGATGAATTTTAGAGAAGCTTTGTTGGAAGTGTATAGAGAAGATATGTTTCCTGTGCGCAAGAATGGTATTAAGTACGAACTTGATAATACTCAACTAAGATTCAAGTCGATGAAAGAAAAGTATGATGCCCACGTGGCTTGCCTTGATGAGTCGGTGCCAGAAGATGAAGTTCGTCAGTTGATCAAAGAGGCCGTTATAAAAATGAAACCAAAACCACATACCTATTTGGACTACGCCAGGAAGAAGTTACAGATATCAATGAATATCGATTTGATTACCAAAAGTACGTGTACTCTTCTCAATTATCAAACATGATTCAATGCTAATCAATGCCGTTTGAAAGATTTTTAGCTTTCTTAGTCTGAGAAATATGTCTTTCGTTTGAATTCAATAACTAGTAAT]
[+] EMBL CB641106 [ CTACTGACCACACACGGCCGGACGGAAGACCCGAACCGTATCGCCTCCACAATCCATCCCCCAGAACCATACCACGCGTTCCCGTTCCCCTCCTAAATACTCGATCAATATCAATCAATCTCCGCCAACTCCCTCGAATCGCTCCTGAATAACTTAGTTTTCTCTTGTTAGATTAGGGTTTCGAGTCTTTCGACGTCCTGCTTGCTTGCAGGGAGATTCTGATGCCGAAGAAGCCGTCGCTGTCGCGGGTTGCTTCAGAGACGCGGCTGCTGTTTTCTAGCTGGGAACCTGAATCCCCGTTGGATGCTACCAGCGGATCCGGAAAAGATGCACCCGCCGATCAACAGGAAGGCGACGGGAAGCGGGGCCGACAACGCTCGCCTGGTGACGAAGCGAGGCCTAAGCGGCAGCGCAAGACGAAGAAGAAGAATAAGAAGCAGTTGGATTTATTGGAGCGGGAGGACGATCCCCTAATCCAATTGAGGTCATTGAAGGATCGATTCAAGGGTCGATTGAAGGAGGGCGTTGCTTCAGCCCGATTGAAGTGTTTAGACACACTATTGAATGAGTCGAG ]
consensusID : consensus_7046#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1491 fasta sequence
[TCAAGTCAACAAGAAATTAGCAAGCCGAAGAAGAAGAAGAAACAGAAGAAGAGGCAGAGGCGCAAGATGGACGAATCCACAGAAAATCTATCATGCCACAGTGGTAGCCCATCCTCTTCTCATGATGGAACAAGCACATCAACAATAGAGGGGGAGCCAAAACCATCTTCTGGGGACCTTGCCAAGATTTCACGAGAACACAAACAAGAACAAGAATCAATGGAGGATTTAGAAGATCTCCTTGGCATGGATGAGGATACCATCTCAAACAAAGTCAGTTACTACTTTCATCAGTTATATGTTCAGGACCATCTTGATGATGATGATGATGATGATGATTGGCTTGAATGCGATGGGCCACAGCAGCTCACTGAGTTGCATGAGCAGCTGGCCTTCTACCGCATCATAGGTTATGAGTTATCAAATGGTAGAAAGCTTGACGAACTGGATATTGCAAAACTGAAAGAGAAGTACCCTCCCTCCATTCTTTATGAGAAGGGGTACTTTCAGTACTATGAGGATAGTCTTGAATGGTACTTTGATCCTGAACGATTCCAGCCTGCTGCCCTTGATAACTACCAGCGTCTAGTGCTTTGTGATAATGGTTTGTACATGGACTGGGATCAATACCACTCAAATTATAGTACCTATGAGAGTGATCTAGCATATGTCAAATTCTGTGAAGAGCTAGCACATAAGACTAAGTGGTTTCAAGATTATTTGGTACTCATTGCTGTTGAGGATAAGATAACCATGGGTCAGTGGGACAAAGTTAAAAATACAGTTTACCTTCAAGCAATGAAGATCGCACTACGCATTCGTGTTGTTTCTCTAATGCAAGTTATGACTGCTTTCCAGGAATATATATGGAGCATGCGGTTTGATTGTTGTAACTACAAGGATTTTGATGGTGTGTATTTTGAGGTTTGGAAGCGGGTTGCTAAGCAGAAGATGGAATTCACTGATGCCCTGTCAGAACTTCATAGAGAAGATATGTTTCCCTTGCGCAATGTTGATATTAAGGATGAGCTTCGCAGTACTCGAGGGAGATTCCGTTCGATGAAGGAAAATTACGATCTCTACGTGGCTTGCATTGATGAAACGGTGCCAGAAAAGGAAGCTCGTCAATTGATCAAAGATGCCATTATAGAAATGATTCCAAAACCACAGACTTATTTGGATTACGCCAGAAACAAGATAAAAATCGCAGAAGATATCGGTTTGATTACCAAAAGCAGAGGACCAGAGCCAAGAACCTAGAAGGTCACTGCACAACACAGCCCAGGGGAGACAATAGCGAGGCAATGCATGCCATGGACAACTAAGCAAATGGCGGCTGAAATCTTTTTGAGTATATTATTAGTAATAAGAAAGGATATTGGCGCTACGGTTTATTATCAAATTTCTTATTTATTATCTTCTGTTGAGATATGATACTTTTATCCCGTGTTACACTGGGCAACCCTATTACAGTGTAATGTTACGGTCTTA]
[+] EMBL AK072478 [TCAAGTCAACAAGAAATTAGCAAGCCGAAGAAGAAGAAGAAACAGAAGAAGAGGCAGAGGCGCAAGATGGACGAATCCACAGAAAATCTATCATGCCACAGTGGTAGCCCATCCTCTTCTCATGATGGAACAAGCACATCAACAATAGAGGGGGAGCCAAAACCATCTTCTGGGGACCTTGCCAAGATTTCACGAGAACACAAACAAGAACAAGAATCAATGGAGGATTTAGAAGATCTCCTTGGCATGGATGAGGATACCATCTCAAACAAAGTCAGTTACTACTTTCATCAGTTATATGTTCAGGACCATCTTGATGATGATGATGATGATGATGATTGGCTTGAATGCGATGGGCCACAGCAGCTCACTGAGTTGCATGAGCAGCTGGCCTTCTACCGCATCATAGGTTATGAGTTATCAAATGGTAGAAAGCTTGACGAACTGGATATTGCAAAACTGAAAGAGAAGTACCCTCCCTCCATTCTTTATGAGAAGGGGTACTTTCAGTACTATGAGGATAGTCTTGAATGGTACTTTGATCCTGAACGATTCCAGCCTGCTGCCCTTGATAACTACCAGCGTCTAGTGCTTTGTGATAATGGTTTGTACATGGACTGGGATCAATACCACTCAAATTATAGTACCTATGAGAGTGATCTAGCATATGTCAAATTCTGTGAAGAGCTAGCACATAAGACTAAGTGGTTTCAAGATTATTTGGTACTCATTGCTGTTGAGGATAAGATAACCATGGGTCAGTGGGACAAAGTTAAAAATACAGTTTACCTTCAAGCAATGAAGATCGCACTACGCATTCGTGTTGTTTCTCTAATGCAAGTTATGACTGCTTTCCAGGAATATATATGGAGCATGCGGTTTGATTGTTGTAACTACAAGGATTTTGATGGTGTGTATTTTGAGGTTTGGAAGCGGGTTGCTAAGCAGAAGATGGAATTCACTGATGCCCTGTCAGAACTTCATAGAGAAGATATGTTTCCCTTGCGCAATGTTGATATTAAGGATGAGCTTCGCAGTACTCGAGGGAGATTCCGTTCGATGAAGGAAAATTACGATCTCTACGTGGCTTGCATTGATGAAACGGTGCCAGAAAAGGAAGCTCGTCAATTGATCAAAGATGCCATTATAGAAATGATTCCAAAACCACAGACTTATTTGGATTACGCCAGAAACAAGATAAAAATCGCAGAAGATATCGGTTTGATTACCAAAAGCAGAGGACCAGAGCCAAGAACCTAGAAGGTCACTGCACAACACAGCCCAGGGGAGACAATAGCGAGGCAATGCATGCCATGGACAACTAAGCAAATGGCGGCTGAAATCTTTTTGAGTATATTATTAGTAATAAGAAAGGATATTGGCGCTACGGTTTATTATCAAATTTCTTATTTATTATCTTCTGTTGAGATATGATACTTTTATCCCGTGTTACACTGGGCAACCCTATTACAGTGTAATGTTACGGTCTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7046#0 TCGCATCCCGTCTACTGACCACACACGGCCGGACGGAAGACCCGAACCGTATCGCCTCCA 60
consensus_7046#1 ----------TCTACTGACCACACACGGCCGGACGGAAGACCCGAACCGTATCGCCTCCA 50
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 CAATCCATCCCCCAGAACCATACCACGCGTTCCCGTTCCCCTCCTAAATACTCGATCAAT 120
consensus_7046#1 CAATCCATCCCCCAGAACCATACCACGCGTTCCCGTTCCCCTCCTAAATACTCGATCAAT 110
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 ATCAATCAATCTCCGCCAACTCCCTCGAATCGCTCCTGAATAACTTAGTTTTCTCTTGTT 180
consensus_7046#1 ATCAATCAATCTCCGCCAACTCCCTCGAATCGCTCCTGAATAACTTAGTTTTCTCTTGTT 170
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 AGATTAGGGTTTCGAGTCTTTCGACGTCCTGCTTGCTTGCAGGGAGATTCTGATGCCGAA 240
consensus_7046#1 AGATTAGGGTTTCGAGTCTTTCGACGTCCTGCTTGCTTGCAGGGAGATTCTGATGCCGAA 230
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 GAAGCCGTCGCTGTCGCGGGTTGCTTCAGAGACGCGGCTGCTGTTTTCTAGCTGGGAACC 300
consensus_7046#1 GAAGCCGTCGCTGTCGCGGGTTGCTTCAGAGACGCGGCTGCTGTTTTCTAGCTGGGAACC 290
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 TGAATCCCCGTTGGATGCTACCAGCGGATCCGGAAAAGATGCACCCGCCGATCAACAGGA 360
consensus_7046#1 TGAATCCCCGTTGGATGCTACCAGCGGATCCGGAAAAGATGCACCCGCCGATCAACAGGA 350
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 AGGCGACGGGAAGCGGGGCCGACAACGCTCGCCTGGTGACGAAGCGAGG----------- 409
consensus_7046#1 AGGCGACGGGAAGCGGGGCCGACAACGCTCGCCTGGTGACGAAGCGAGGCCTAAGCGGCA 410
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 ------------------------------------------------------------
consensus_7046#1 GCGCAAGACGAAGAAGAAGAATAAGAAGCAGTTGGATTTATTGGAGCGGGAGGACGATCC 470
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 ----------------TCATTGAAGGATCGATTCAAGGGTCGATTGAAGGAGGGCGTTGC 453
consensus_7046#1 CCTAATCCAATTGAGGTCATTGAAGGATCGATTCAAGGGTCGATTGAAGGAGGGCGTTGC 530
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 TTCAGCCCGATTGAAGTGTTTAGACACACTATTGAATGAGTCGAGGGATTTATCGCAGGG 513
consensus_7046#1 TTCAGCCCGATTGAAGTGTTTAGACACACTATTGAATGAGTCGAGGGATTTATCGCAGGG 590
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 GAATGAGTCCAAGGGGAATTTGTTGAAGAGCCTCATTCAAAAGGCAGAGTTGGATTTGTG 573
consensus_7046#1 GAATGAGTCCAAGGGGAATTTGTTGAAGAGCCTCATTCAAAAGGCAGAGTTGGATTTGTG 650
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 GCAGGTGAAGGAACTGGAAACCGATCCCACGTCCGGTGCTAGCCAATCCAAAGAAGAAGC 633
consensus_7046#1 GCAGGTGAAGGAACTGGAAACCGATCCCACGTCCGGTGCTAGCCAATCCAAAGAAGAAGC 710
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 TTCTGCTGCAGCTTCTGATGGACAGGGAGACGATAAGGAAAGGGGTGACTTGCAAGCAGT 693
consensus_7046#1 TTCTGCTGCAGCTTCTGATGGACAGGGAGACGATAAGGAAAGGGGTGACTTGCAAGCAGT 770
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 CGAGGCCTATGGTTCTCCTCCTGGTAAGGAGAAGGTTGACTTGCAAGCAGCTAAGGACTC 753
consensus_7046#1 CGAGGCCTATGGTTCTCCTCCTGGTAAGGAGAAGGTTGACTTGCAAGCAGCTAAGGACTC 830
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 TTCTCCCACTGCTGGGAGGAAGGGAAAGGGCAAGCGTATTATAGGGTATGAAGCACAACA 813
consensus_7046#1 TTCTCCCACTGCTGGGAGGAAGGGAAAGGGCAAGCGTATTATAGGGTATGAAGCACAACA 890
consensus_7046#2 ------------------------------------------------------------
consensus_7046#0 GAAGGAAAGCAACATTCAAGATGTTAAAACATCAAGTCAACAAGAAACTAGAAAGCCAAA 873
consensus_7046#1 GAAGGAAAGCAACATTCAAGATGTTAAAACATCAAGTCAACAAGAAACTAGAAAGCCAAA 950
consensus_7046#2 -------------------------------TCAAGTCAACAAGAAATTAGCAAGCCGAA 29
**************** *** ***** **
consensus_7046#0 GAGGAAGAAG---CAGAAGAAGAGGCAGAGGCGCAAGATGGAGGAATCCACGGAAAATCT 930
consensus_7046#1 GAGGAAGAAG---CAGAAGAAGAGGCAGAGGCGCAAGATGGAGGAATCCACGGAAAATCT 1007
consensus_7046#2 GAAGAAGAAGAAACAGAAGAAGAGGCAGAGGCGCAAGATGGACGAATCCACAGAAAATCT 89
** ******* ***************************** ******** ********
consensus_7046#0 ATCATGCCGCAGTGGCAGCAGCCCATCCTCTTCTCATGATGCAACAAGCACATCGACAAT 990
consensus_7046#1 ATCATGCCGCAGTGGCAGCAGCCCATCCTCTTCTCATGATGCAACAAGCACATCGACAAT 1067
consensus_7046#2 ATCATGCCACAGTGGTAGC---CCATCCTCTTCTCATGATGGAACAAGCACATCAACAAT 146
******** ****** *** ******************* ************ *****
consensus_7046#0 AGAGGGGGAGCCAGAACAACCATCTTTTGGGGATCTTGCGAGCATTGCACAAGACCATGA 1050
consensus_7046#1 AGAGGGGGAGCCAGAACAACCATCTTTTGGGGATCTTGCGAGCATTGCACAAGACCATGA 1127
consensus_7046#2 AGAGGGGGAGCCAAA---ACCATCTTCTGGGGACCTTGCCAAGATTTCACGAGAACA--- 200
************* * ******** ****** ***** * *** *** *** **
consensus_7046#0 TGACAAGATTGCATCTGACGTTGTTGACATCAAACAAGAACAAGAATCAGCAGAAGATAT 1110
consensus_7046#1 TGACAAGATTGCATCTGACGTTGTTGACATCAAACAAGAACAAGAATCAGCAGAAGATAT 1187
consensus_7046#2 ------------------------------CAAACAAGAACAAGAATCAATGGAGGATTT 230
******************* ** *** *
consensus_7046#0 CCTAGCTCTCCTCGACATGATGGATAAGGATGCCATCCAAGAAAAATTCAATTACTATCT 1170
consensus_7046#1 CCTAGCTCTCCTCGACATGATGGATAAGGATGCCATCCAAGAAAAATTCAATTACTATCT 1247
consensus_7046#2 AGAAGATCTCCTTGGCAT---GGATGAGGATACCATCTCAAACAAAGTCAGTTACTACTT 287
** ****** * *** **** ***** ***** * * *** *** ****** *
consensus_7046#0 CAAGCAGCTGGGCTTTGAG-------TCAA--------ATGAGTATGATTTTTGGTCTGA 1215
consensus_7046#1 CAAGCAGCTGGGCTTTGAG-------TCAA--------ATGTGTATGATTTTTGGTCTGA 1292
consensus_7046#2 TCATCAGTTATATGTTCAGGACCATCTTGATGATGATGATGATGATGATGATTGGCTTGA 347
* *** * ** ** * * *** ***** **** ***
consensus_7046#0 AACCTATGAGCCAGAGCAACTCACTGCGTTGCACGAGCGGTTAGCCATCTACCGCATCGT 1275
consensus_7046#1 AACCTATGAGCCAGAGCAACTCACTGCGTTGCACGAGCGGTTAGCCATCTACCGCATCGT 1352
consensus_7046#2 ATGCGATGGGCCACAGCAGCTCACTGAGTTGCATGAGCAGCTGGCCTTCTACCGCATCAT 407
* * *** **** **** ******* ****** **** * * *** *********** *
consensus_7046#0 AGGTTATGAGCTATCAAAGGGTAGGAAGCTTGGCAAACAGGATATTGCAAAACTGAAAGA 1335
consensus_7046#1 AGGTTATGAGCTATCAAAGGGTAGGAAGCTTGGCAAACAGGATATTGCAAAACTGAAAGA 1412
consensus_7046#2 AGGTTATGAGTTATCAAATGGTAGAAAGCTTGACGAACTGGATATTGCAAAACTGAAAGA 467
********** ******* ***** ******* * *** *********************
consensus_7046#0 GCAGTACAATCCGTCCATTCTTCGTAAGGAAGGATACTTCCGGCACTATGAGGAGAGTCT 1395
consensus_7046#1 GCAGTACAATCCGTCCATTCTTCGTAAGGAAGGATACTTCCGGCACTATGAGGAGAGTCT 1472
consensus_7046#2 GAAGTACCCTCCCTCCATTCTTTATGAGAAGGGGTACTTTCAGTACTATGAGGATAGTCT 527
* ***** *** ********* * ** * ** ***** * * ********** *****
consensus_7046#0 TGAGTGGTACTTCGATCTTGAATGGTGCAAGTACTCTGGTTTTCAAGACTATCAGCGGCT 1455
consensus_7046#1 TGAGTGGTACTTCGATCTTGAATGGTGCAAGTACTCTGGTTTTCAAGACTATCAGCGGCT 1532
consensus_7046#2 TGAATGGTACTTTGATCCTGAACGATTCCAGCCTGCTGCCCTTGATAACTACCAGCGTCT 587
*** ******** **** **** * * * ** *** ** * **** ***** **
consensus_7046#0 AGTGCTTCATGATAATGTTGAGTTCTTAGAGTGGGAGCATTACCACTTAAATTATAATAC 1515
consensus_7046#1 AGTGCTTCATGATAATGTTGAGTTCTTAGAGTGGGAGCATTACCACTTAAATTATAATAC 1592
consensus_7046#2 AGTGCTTTGTGATAATGGTTTGTACATGGACTGGGATCAATACCACTCAAATTATAGTAC 647
******* ******** * ** * * ** ***** ** ******* ******** ***
consensus_7046#0 CTATGAGGATGATCTAGCATATGTCAGGTATCGTGCACGCTTAGCAAATGAGACTAAGTG 1575
consensus_7046#1 CTATGAGGATGATCTAGCATATGTCAGGTATCGTGCACGCTTAGCAAATGAGACTAAGTG 1652
consensus_7046#2 CTATGAGAGTGATCTAGCATATGTCAAATTCTGTGAAGAGCTAGCACATAAGACTAAGTG 707
******* ***************** * *** * ***** ** **********
consensus_7046#0 GATTGAAGATTATCTGGCCC---------------GTGACATAACTCAGGCTGAGTGGCG 1620
consensus_7046#1 GATTGAAGATTATCTGGCCC---------------GTGACATAACTCAGGCTGAGTGGCG 1697
consensus_7046#2 GTTTCAAGATTATTTGGTACTCATTGCTGTTGAGGATAAGATAACCATGGGTCAGTGGGA 767
* ** ******** *** * * * ***** ** * *****
consensus_7046#0 TAGGGTTAAGGATATAGCTTCAGTTCAAGCACTGAAGATTGCAAGAGTCTCTGGTGGTGT 1680
consensus_7046#1 TAGGGTTAAGGATATAGCTTCAGTTCAAGCACTGAAGATTGCAAGAGTCTCTGGTGGTGT 1757
consensus_7046#2 CAAAGTTAAAAATACAGTTTACCTTCAAGCAATGAAGATCGCACTACGCATTCGTGTTGT 827
* ***** *** ** ** ******** ******* *** * * * *** ***
consensus_7046#0 CAAGGCACAGGCAGCTTTGGCTGGTTTCAGAGATCATATATGGAGCATTCAGTTTGATTT 1740
consensus_7046#1 CAAGGCACAGGCAGCTTTGGCTGGTTTCAGAGATCATATATGGAGCATTCAGTTTGATTT 1817
consensus_7046#2 TTCTCTAATGCAAGTTATGACTGCTTTCCAGGAATATATATGGAGCATGCGGTTTGATTG 887
* * ** * ** *** **** ** ************* * ********
consensus_7046#0 CAATCACTATAAGGATTTTGATGGTGTTTACTTCAAGATTTGGAAGCGGGTTGCTAAGAG 1800
consensus_7046#1 CAATCACTATAAGGATTTTGATGGTGTTTACTTCAAGATTTGGAAGCGGGTTGCTAAGAG 1877
consensus_7046#2 TTGTAACTACAAGGATTTTGATGGTGTGTATTTTGAGGTTTGGAAGCGGGTTGCTAAGCA 947
* **** ***************** ** ** ** ********************
consensus_7046#0 AAAGATGAATTTTAGAGAAGCTTTGTTGGAAGTGTATAGAGAAGATATGTTTCCTGTGCG 1860
consensus_7046#1 AAAGATGAATTTTAGAGAAGCTTTGTTGGAAGTGTATAGAGAAGATATGTTTCCTGTGCG 1937
consensus_7046#2 GAAGATGGAATTCACTGATGCCCTGTCAGAACTTCATAGAGAAGATATGTTTCCCTTGCG 1007
****** * ** * ** ** *** *** * ******************* ****
consensus_7046#0 CAAGAATGGTATTAAGTACGAACTTGATAATACTCAACTAAGATTCAAGTCGATGAAAGA 1920
consensus_7046#1 CAAGAATGGTATTAAGTACGAACTTGATAATACTCAACTAAGATTCAAGTCGATGAAAGA 1997
consensus_7046#2 CAATGTTGATATTAAGGATGAGCTTCGCAGTACTCGAGGGAGATTCCGTTCGATGAAGGA 1067
*** ** ******* * ** *** * ***** * ****** ******** **
consensus_7046#0 AAAGTATGATGCCCACGTGGCTTGCCTTGATGAGTCGGTGCCAGAAGATGAAGTTCGTCA 1980
consensus_7046#1 AAAGTATGATGCCCACGTGGCTTGCCTTGATGAGTCGGTGCCAGAAGATGAAGTTCGTCA 2057
consensus_7046#2 AAATTACGATCTCTACGTGGCTTGCATTGATGAAACGGTGCCAGAAAAGGAAGCTCGTCA 1127
*** ** *** * *********** ******* *********** * **** ******
consensus_7046#0 GTTGATCAAAGAGGCCGTTATAAAAATGAAACCAAAACCACATACCTATTTGGACTACGC 2040
consensus_7046#1 GTTGATCAAAGAGGCCGTTATAAAAATGAAACCAAAACCACATACCTATTTGGACTACGC 2117
consensus_7046#2 ATTGATCAAAGATGCCATTATAGAAATGATTCCAAAACCACAGACTTATTTGGATTACGC 1187
*********** *** ***** ****** *********** ** ******** *****
consensus_7046#0 CAGGAAGAAGTTACAGATATCAATGAATATCGATTTGATTACCAAAAGTACGTGTACTCT 2100
consensus_7046#1 CAGGAAGAAGTTACAGATATCAATGAATATCGATTTGATTACCAAAAGTACGTGTACTCT 2177
consensus_7046#2 CAGAAACAAGATAAAAATCGCAGAAGATATCGGTTTGATTACCAAAAGCA-GAGGACCAG 1246
*** ** *** ** * ** ** ****** *************** * * * **
consensus_7046#0 TCTCAATTATCAAA-----CATGATTCAATGCTAATCAATGCCGTT-----TGAAAGAAT 2150
consensus_7046#1 TCTCAATTATCAAA-----CATGATTCAATGCTAATCAATGCCGTT-----TGAAAGATT 2227
consensus_7046#2 AGCCAAGAACCTAGAAGGTCACTGCACAACACAGCCCAGGGGAGACAATAGCGAGGCAAT 1306
*** * * * ** *** * ** * * ** * *
consensus_7046#0 TTTAGCTTTCTTAGTCTGAG-AAATA-TGTCTT---TCGTTTGAATTCAATAACTAGTAA 2205
consensus_7046#1 TTTAGCTTTCTTAGTCTGAG-AAATA-TGTCTT---TCGTTTGAATTCAATAACTAGTAA 2282
consensus_7046#2 GCATGCCATGGACAACTAAGCAAATGGCGGCTGAAATCTTTTTGAGTATATTATTAGTAA 1366
** * ** ** **** * ** ** *** * * ** * ******
consensus_7046#0 TCTGTCCG--TGCTAATGCTATGGTGACATTTAGTAATCGTCTGCATGTAACGCTTATCA 2263
consensus_7046#1 T----------------------------------------------------------- 2283
consensus_7046#2 TAAGAAAGGATATTGGCGCTACGGTT-TATTATCAAATTTCTTATTTATTATCTTCTGTT 1425
*
consensus_7046#0 TCATGAACATAAATTAATTTGAACATTTGCAAGAATCTGATTATCGTTTGAAATACTATC 2323
consensus_7046#1 ------------------------------------------------------------
consensus_7046#2 GAGATATGATACTTTTATCCCGTGTTACACTGGGCAACCCTATTACAGTGTAATGTTACG 1485
consensus_7046#0 G----- 2324
consensus_7046#1 ------
consensus_7046#2 GTCTTA 1491
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||