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Oryza sativa
cluster # 7105 cluster # 7105       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7105#0 length = 872 sequences # 4  

consensusID : consensus_7105#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 872
fasta sequence
                              [ATGCTATGCTACCGCGCGTTAGCTAGCCGTCGGTGTGTAGAGAGAGAGAGAGAGGGGTTAATTTAATTCGGCTCAAAGAAAGAACCCTAAAAAGCAGGTTGTAGAGAGAGAAATTAATCTCGAGGAGTTTTGTGGTCGACATGCGTCCTCCTCTCCCCTCTAATACTCCAAAATCACCACCAAACTAGTCTTGTTCTCTCCTCTCTCTCTCTCTCTTCTTCCTCCTTTCTCTCTCCCCATCTTCTTCTCCTTCCTATCCATTAGCTAGCTAGCTTGAGAGATCTCCATTAGAGAGAGCTTGCCCATATGCACTAGCACCATCCATGCATATGCATCTTGTAGTTATTGCTTGCTCTCTTCAATCCCAGCTTTGCCTCTAAATCCAGCAGACGCATCGGATATATATCTTCAATCTTCAACCATATAGTGGTTGAATTGAATCTACATGTATATATAGATGAGAATTAGAGGCTTAGAGCTGGAGATTTCGAAGTAAATATATTTCTTGGTCGCCTGCCGATCTTGCGAGGTGTAGAGGGGAGAGATTTTGGGATGCTTGAGGTGTCCACGC-TGCGAAGCCCTAAGGCGGATCAGCGGGCGGGCGTCGGCGGCCACCATGTCGTCGGCTTCGTCCCGGCGCCGCCGTCGCCGGCCGACGTCGCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCGAGTACATCGACTTCAGCTGCTGCGACGTGCC-GTTCTTCCACGCC-GACGACGGCGACATCCTCCCGGACCTCGAGGTCGACCCCACGGAGCTCCTCGCCGAGTTCGCCAGCTCCCCGGACGACGAGCCGCCGCCGACGACGTCGGCTCCGGGCCCCGGCGAGCCATC]

[+] EMBL AK109503             [ATGCTATGCTACCGCGCGTTAGCTAGCCGTCGGTGTGTAGAGAGAGAGAGAGAGGGGTTAATTTAATTCGGCTCAAAGAAAGAACCCTAAAAAGCAGGTTGTAGAGAGAGAAATTAATCTCGAGGAGTTTTGTGGTCGACATGCGTCCTCCTCTCCCCTCTAATACTCCAAAATCACCACCAAACTAGTCTTGTTCTCTCCTCTCTCTCTCTCTCTTCTTCCTCCTTTCTCTCTCCCCATCTTCTTCTCCTTCCTATCCATTAGCTAGCTAGCTTGAGAGATCTCCATTAGAGAGAGCTTGCCCATATGCACTAGCACCATCCATGCATATGCATCTTGTAGTTATTGCTTGCTCTCTTCAATCCCAGCTTTGCCTCTAAATCCAGCAGACGCATCGGATATATATCTTCAATCTTCAACCATATAGTGGTTGAATTGAATCTACATGTATATATAGATGAGAATTAGAGGCTTAGAGCTGGAGATTTCGAAGTAAATATATTTCTTGGTCGCCTGCCGATCTTGCGAGGTGTAGAGGGGAGAGATTTTGGGATGCTTGAGGTGTCCACGC TGCGAAGCCCTAAGGCGGATCAGCGGGCGGGCGTCGGCGGCCACCATGTCGTCGGCTTCGTCCCGGCGCCGCCGTCGCCGGCCGACGTCGCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCGAGTACATCGACTTCAGCTGCTGCGACGTGCC GTTCTTCCACGCC GACGACGGCGACATCCTCCCGGACCTCGAGGTCGACCCCACGGAGCTCCTCGCCGAGTTCGCCAGCTCCCCGGACGACGAGCCGCCGCCGACGACGTCGGCTCCGGGCCCCGGCG       ]
[+] EMBL CB682575             [                                                                                                                                                                                                                                   TCTCCCTCTCCATCTTCTTCTCCTTCCTATCCATTAGCTAGCTAGCTTGAGAGATCTCCATTAGAGAGAGCTTGCCCATATGCACTAGCACCATCCATGCATATGCATCTTGTAGTTATTGCTTGCTCTCTTTAATCCCAGCTTTGCCTCTAAATCCAGCAGACGCATCGGATATATATCTTCAATCTTCAACCATATAGTGGTTGAATTGAATCTACATGTATATATAGATGAGAATTAGAGGCTTAGAGCTGGAGATTTCGAAGTAAATATATTTCTTGGTCGCCTGCCGATCTTGCGAGGTGTAGAGGGGAGAGATTTTGGGATGCTTGAGGTGTCCACGC TGCGAAGCCCTAAGGCGGATCAGCGGGCGGGCGTCGGCGGCCACCATGTCGTCGGCTTCGTCCCGGCGCCGCCGTCGCCGGCCGACGTCGCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCGAGTACATCGACTTCAGCTGCTGCGACGTGCC GTTCTTCCACGCC GACGACGGTGACATCCTCCCGGACCTCGAGGTCGACCCCACGGAGCTCCTCGTCGAGTTCGGCAG                                                         ]
[+] EMBL CB648304             [                                                                                                                                                                                                                                                                                     GAGATCTCCATTAGAGAGAGCTTGCCCATATGCACTAGCACCATCCATGCATATGCATCTTGTAGTTATTGCTTGCTCTCTTCAATCCCAGCTTTGCCTCTAAATCCAGCAGACGCATCGGATATATATCTTCAATCTTCAACCATATAGTGGTTGAATTGAATCTACATGTATATATAGATGAGAATTAGAGGCTTAGAGCTGGAGATTTCGAAGTAAATATATTTCTTGGTCGCCTGCCGATCTTGCGAGGTGTAGAGGGGAGAGATTTTGGGATGCTTGAGGTGTCCACGC TGCGAAGCCCTAAGGCGGATCAGCGGGCGGGCGTCAGCGGCCACCATGTCTTCAGCTTCATCCCGGCGCCGCCGTCGCCGGCCGACGTCGCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCCAGTACATCGACTTCAGCTGCTGCGACGAGCC GTTCTTCCACGCC GACGACGGCGACATCCTCCCGGACCTCGAGGTCTACCCCACGGAGCTCCTCGCCGAGTTCGCCAGCTCCCCGGACGACGAGCCGCCGCCGACGACGTCGGCTCCGGGCCCCGGCGAGCCATC]
[+] EMBL CB652067             [                                                                                                                                                                                                                                                                                     GAGATCCCCTTTAGAGAGAGCTTGCCCATATGCACTAGCACCATCCATGCATATGCATCTTGTAGTTATTGCTTGCTCTCTTCAATCCCAGCTTTGCCTCTAAATCCAGCAGACGCATCGGATATATATCTTCAATCTTCAACCATATAGTGGTTGAATTGAATCTACATGTATATATAGATGACAATTAGAGGCTTAGAGCTGGAGATTTCGAAGTAAATATATTTCTTGGTCGCCTGCCGATCTTGCGAGGTGTAGAGGGGAGAGATTTTGGGATGCTTGAGGTGTCCACGCATGCGAAGCCCTAAGGCGGATCAGCGGGCGGGCGTCGGCGGCCACCATGTCGTCGGCTTCGTCCCGGCGCCGCCGTCACCGGCCGACGTCGCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCGAGTACATCAACTTCAACTGCTGCGACGTGCCAGATCTTCCACGCCTTACGACGGCGACATCC                                                                                                          ]


>consensus_7105#0 ATGCTATGCTACCGCGCGTTAGCTAGCCGTCGGTGTGTAGAGAGAGAGAGAGAGGGGTTA ATTTAATTCGGCTCAAAGAAAGAACCCTAAAAAGCAGGTTGTAGAGAGAGAAATTAATCT CGAGGAGTTTTGTGGTCGACATGCGTCCTCCTCTCCCCTCTAATACTCCAAAATCACCAC CAAACTAGTCTTGTTCTCTCCTCTCTCTCTCTCTCTTCTTCCTCCTTTCTCTCTCCCCAT CTTCTTCTCCTTCCTATCCATTAGCTAGCTAGCTTGAGAGATCTCCATTAGAGAGAGCTT GCCCATATGCACTAGCACCATCCATGCATATGCATCTTGTAGTTATTGCTTGCTCTCTTC AATCCCAGCTTTGCCTCTAAATCCAGCAGACGCATCGGATATATATCTTCAATCTTCAAC CATATAGTGGTTGAATTGAATCTACATGTATATATAGATGAGAATTAGAGGCTTAGAGCT GGAGATTTCGAAGTAAATATATTTCTTGGTCGCCTGCCGATCTTGCGAGGTGTAGAGGGG AGAGATTTTGGGATGCTTGAGGTGTCCACGCTGCGAAGCCCTAAGGCGGATCAGCGGGCG GGCGTCGGCGGCCACCATGTCGTCGGCTTCGTCCCGGCGCCGCCGTCGCCGGCCGACGTC GCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCGAGTACATCGACTTC AGCTGCTGCGACGTGCCGTTCTTCCACGCCGACGACGGCGACATCCTCCCGGACCTCGAG GTCGACCCCACGGAGCTCCTCGCCGAGTTCGCCAGCTCCCCGGACGACGAGCCGCCGCCG ACGACGTCGGCTCCGGGCCCCGGCGAGCCATC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)