These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7112#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2361 fasta sequence [TCTCCTCCGCCTCCGCCGCCGGTTGCCTCTGCCCATAAACACGAGGGCCTTCTCGCCGTCTTCACCCTCCCCTGCGCCCCATGAGATCCCCACCGTCTACTCCTTCCTCCAGCCTTCCGTCTTCGCGCCGCGGCCCAAACCCCAGCCGCCGCCGCCGCCGCCGCCACCTACACCTCCCGCGCACAAGACGCTGCCCGTCGGCGATGCCGTCGCGCTCGAGGACGAGCTGCTCGCCGCCGTCTCCGAGGACCGCTCGGACGACGCGTGGCTCGCGTTCAGGTCCCTGGCGTCGGCCTCCCTCTCGCCCTCGCCTCCCGCCGCCGCGGCGCTCGTCTCCCACCTCGCCGCAGCGCACCACCACCGTCTCGGCCTCAAGCGTGCCTTCGCGGCCGCCGTGTTCCTGCTCGAGAAGAGCCCCCACGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCGCCGCAGCGGCCTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGCGCCGCCTCCCGGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACACGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGCTCATAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTGTATACTCCTCAATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGCTTGTCTCAGAGATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTATTGATGCTTCTATGACAGCACATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGAGAGAGGCGAGGTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAGAGAACAACCGTCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGATAGAAATTGCAACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGTTGGAGGATGCTCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATCAGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAAATCTTAAATGAGCTAATATCATGTTTATCCTGAAATACTCATGCAATACATATTTGTGTTCATTTGGTTCAAAAAAAAAGA] [+] EMBL AK105428 [TCTCCTCCGCCTCCGCCGCCGGTTGCCTCTGCCCATAAACACGAGGGCCTTCTCGCCGTCTTCACCCTCCCCTGCGCCCCATGAGATCCCCACCGTCTACTCCTTCCTCCAGCCTTCCGTCTTCGCGCCGCGGCCCAAACCCCAGCCGCCGCCGCCGCCGCCGCCACCTACACCTCCCGCGCACAAGACGCTGCCCGTCGGCGATGCCGTCGCGCTCGAGGACGAGCTGCTCGCCGCCGTCTCCGAGGACCGCTCGGACGACGCGTGGCTCGCGTTCAGGTCCCTGGCGTCGGCCTCCCTCTCGCCCTCGCCTCCCGCCGCCGCGGCGCTCGTCTCCCACCTCGCCGCAGCGCACCACCACCGTCTCGGCCTCAAGCGTGCCTTCGCGGCCGCCGTGTTCCTGCTCGAGAAGAGCCCCCACGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCGCCGCAGCGGCCTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGCGCCGCCTCCCGGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACACGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGCTCATAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTGTATACTCCTCAATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGCTTGTCTCAGAGATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTATTGATGCTTCTATGACAGCACATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGAGAGAGGCGAGGTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAGAGAACAACCGTCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGATAGAAATTGCAACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGTTGGAGGATGCTCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATCAGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAAATCTTAAATGAGCTAATATCATGTTTATCCTGAAATACTCATGCAATACATATTTGTGTT ] [+] EMBL AK073287 [ ACGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCGCCGCAGCGGCCTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGCGCCGCCTCCCGGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACACGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGCTCATAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTGTATACTCCTCAATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGCTTGTCTCAGAGATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTATTGATGCTTCTATGACAGCCCATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGAGAGAGGCGAGGTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAGAGAACAACCGTCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGATAGAAATTGCAACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGTTGGAGGATGCTCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATCAGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAAATCTTAAATGAGCTAATATCATG ] [+] EMBL CB649774 [ taaggGCGCTGACACGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGC ] [-] EMBL CB649775 [ TATGAACCAAATAATCAGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAAATCTTAAATGAGCTAATATCATGTTTATCCTGAAATACTCATGCAATACATATTTGTGTTCATTTGGTTCAAAAAAAAAGA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||