cluster # 7112

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7112 cluster # 7112 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7112#0 length = 2361 sequences # 4
consensusID : consensus_7112#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2361
fasta sequence
                              [TCTCCTCCGCCTCCGCCGCCGGTTGCCTCTGCCCATAAACACGAGGGCCTTCTCGCCGTCTTCACCCTCCCCTGCGCCCCATGAGATCCCCACCGTCTACTCCTTCCTCCAGCCTTCCGTCTTCGCGCCGCGGCCCAAACCCCAGCCGCCGCCGCCGCCGCCGCCACCTACACCTCCCGCGCACAAGACGCTGCCCGTCGGCGATGCCGTCGCGCTCGAGGACGAGCTGCTCGCCGCCGTCTCCGAGGACCGCTCGGACGACGCGTGGCTCGCGTTCAGGTCCCTGGCGTCGGCCTCCCTCTCGCCCTCGCCTCCCGCCGCCGCGGCGCTCGTCTCCCACCTCGCCGCAGCGCACCACCACCGTCTCGGCCTCAAGCGTGCCTTCGCGGCCGCCGTGTTCCTGCTCGAGAAGAGCCCCCACGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCGCCGCAGCGGCCTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGCGCCGCCTCCCGGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACACGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGCTCATAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTGTATACTCCTCAATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGCTTGTCTCAGAGATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTATTGATGCTTCTATGACAGCACATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGAGAGAGGCGAGGTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAGAGAACAACCGTCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGATAGAAATTGCAACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGTTGGAGGATGCTCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATCAGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAAATCTTAAATGAGCTAATATCATGTTTATCCTGAAATACTCATGCAATACATATTTGTGTTCATTTGGTTCAAAAAAAAAGA]

[+] EMBL AK105428             [TCTCCTCCGCCTCCGCCGCCGGTTGCCTCTGCCCATAAACACGAGGGCCTTCTCGCCGTCTTCACCCTCCCCTGCGCCCCATGAGATCCCCACCGTCTACTCCTTCCTCCAGCCTTCCGTCTTCGCGCCGCGGCCCAAACCCCAGCCGCCGCCGCCGCCGCCGCCACCTACACCTCCCGCGCACAAGACGCTGCCCGTCGGCGATGCCGTCGCGCTCGAGGACGAGCTGCTCGCCGCCGTCTCCGAGGACCGCTCGGACGACGCGTGGCTCGCGTTCAGGTCCCTGGCGTCGGCCTCCCTCTCGCCCTCGCCTCCCGCCGCCGCGGCGCTCGTCTCCCACCTCGCCGCAGCGCACCACCACCGTCTCGGCCTCAAGCGTGCCTTCGCGGCCGCCGTGTTCCTGCTCGAGAAGAGCCCCCACGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCGCCGCAGCGGCCTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGCGCCGCCTCCCGGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACACGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGCTCATAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTGTATACTCCTCAATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGCTTGTCTCAGAGATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTATTGATGCTTCTATGACAGCACATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGAGAGAGGCGAGGTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAGAGAACAACCGTCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGATAGAAATTGCAACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGTTGGAGGATGCTCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATCAGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAAATCTTAAATGAGCTAATATCATGTTTATCCTGAAATACTCATGCAATACATATTTGTGTT                     ]
[+] EMBL AK073287             [                                                                                                                                                                                                                                                                                                                                                                                                                                   ACGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCGCCGCAGCGGCCTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGCGCCGCCTCCCGGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACACGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGCTCATAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTGTATACTCCTCAATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGCTTGTCTCAGAGATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTATTGATGCTTCTATGACAGCCCATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGAGAGAGGCGAGGTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAGAGAACAACCGTCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGATAGAAATTGCAACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGTTGGAGGATGCTCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATCAGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAAATCTTAAATGAGCTAATATCATG                                                          ]
[+] EMBL CB649774             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                taaggGCGCTGACACGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB649775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TATGAACCAAATAATCAGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAAATCTTAAATGAGCTAATATCATGTTTATCCTGAAATACTCATGCAATACATATTTGTGTTCATTTGGTTCAAAAAAAAAGA]




>consensus_7112#0
TCTCCTCCGCCTCCGCCGCCGGTTGCCTCTGCCCATAAACACGAGGGCCTTCTCGCCGTC
TTCACCCTCCCCTGCGCCCCATGAGATCCCCACCGTCTACTCCTTCCTCCAGCCTTCCGT
CTTCGCGCCGCGGCCCAAACCCCAGCCGCCGCCGCCGCCGCCGCCACCTACACCTCCCGC
GCACAAGACGCTGCCCGTCGGCGATGCCGTCGCGCTCGAGGACGAGCTGCTCGCCGCCGT
CTCCGAGGACCGCTCGGACGACGCGTGGCTCGCGTTCAGGTCCCTGGCGTCGGCCTCCCT
CTCGCCCTCGCCTCCCGCCGCCGCGGCGCTCGTCTCCCACCTCGCCGCAGCGCACCACCA
CCGTCTCGGCCTCAAGCGTGCCTTCGCGGCCGCCGTGTTCCTGCTCGAGAAGAGCCCCCA
CGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCGCCGCAGCGGC
CTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGCGCCGCCTCCC
GGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACACGGGCGCCTT
CGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAGAAGTCCCC
CTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTTGGTGGCTG
CTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATGTCGGCTAT
TGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCTTGGAGAGA
TATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTCGGCAAGAA
GATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAGTCAGTTTC
ATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCATTTGATTT
AGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGGGAATTAGC
TCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCAGTTGAGGA
TTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAACAAGGCTCA
TAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTGTATACTCCTC
AATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGCTTGTCTCAGA
GATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTATTGATGCTTC
TATGACAGCACATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGAGAGAGGCGAG
GTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAGAGAACAACCG
TCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGATAGAAATTGC
AACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGTTGGAGGATGC
TCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATCAGACCTACCT
TTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATACTATGGAC
TGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTTCTGTATGC
TTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCACAAGAGTT
GAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCACAAAAAACT
GAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATTGCATTTAA
GAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTATCATGACTGAT
TTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAACAAGCAGCGGA
CCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGATAAGGTTAGGA
AGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTAACTATATAGG
CTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCAAACCATGAAA
ATCTTAAATGAGCTAATATCATGTTTATCCTGAAATACTCATGCAATACATATTTGTGTT
CATTTGGTTCAAAAAAAAAGA
clustalw multiple alignements is not computed in this case