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Oryza sativa
cluster # 7116 cluster # 7116       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7116#0 length = 2169 sequences # 4  

consensusID : consensus_7116#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2169
fasta sequence
                              [TCGCTCCCAGTCTCCCTCGTCGTCTCCTCCTCCTCCTCCTCCATCCGCCGCCGCCACCGGCCTCGTCCTCTCTCCTTCGATGGCGACCGCCGCCGCCACGCAGTCGCAGCCGGTGCGCGTCGTGCTACGGGTGCGCCCGCACCTCCCGTCCGAGGCGAACTCCGCGGAGGCGCCGTGCGTCGGGCTTCTCGGGAGCCACCCCGGCGGCGAGGTCACCGTCCAGCTCAAGGACCAGTACACCAGCCGGAACGAGTGCTATAAGCTGGACGCTTTCTTCGGCCAAGAGAGCCGTGTCTGCGAGATATTCGATCAGGAGGTCAGCGCCGTGATCCCGGGAATCTTCGAGGGGACCAACGCGACGGTCTTCGCCTATGGCGCTACCGGCAGCGGCAAGACCTACACGATGCAGGGCACTGAGGATTTGCCGGGGCTCATCCCCTTGGCGGTTTCGACCGTGTTGGCGCTATGTACTGGCACATGGTGCTCTGTTGAGATCTCATACTATGAGGTATACATGGAGCGGTGCTATGACTTGCTAGAGCCCAAGGCAAGAGAGATCATGGTGCTGGATGACAAAGATGGCAACTTACAGCTAAAGGGCTTGGCCTGGGTGCCTGTGCGATCTCTGGAGGAATTCCACGAGATATACTCTATAGGAGTGCAGAGGAGAAAAGTTGCCCACACAGGCCTGAACGATGTTTCAAGTAGGAGCCATGCTGTGCTATCGATCAGGATTACTACTGATGTTGTTAAAGGGAAGCTTAACCTCATCGACTTGGCTGGTAATGAGGACAACCGGAGAACTTGCAATGAGGGGATCCGGCTACAAGAGAGCGCCAAGATCAACCAGTCGCTGTTTGCGTTGTCTAATGTCATATCGGCTCTCAACAAGAAAGAGCCACGGATACCATACAGAGAGAGTAAATTGACCCGCATACTGCAAGATTCTCTTGGAGGCAATAGCCATGCTGTCATGATAGCATGCCTTAATCCCGTGGAATACCAGGAGGCAGTCCACACAGTAAGCTTGGCTGCTCGTTCGCGCCATGTTACGAACCACATGAGTTCAGCAAGCAAGCAAGAGACTCCTAAAGATAAGGTTGACATGGAAGCCAAATTGCGAGCTTGGTTGGAATCCAAGGGGAAAACGAAGAGCATACAAAGAATGGATGGACTTCTCTCCCCAAATGCAATCAAGACTCCTCTATCCATGAGCCATAAGAAGCAATCAGCATCTGGCAGGGTTTCTGGTAGAGGTAAAGCAATGGATCAAGATGGTGGTAAAATCAAGAAGGTGCTTTTTGACTCAGCAGCCCGTATTCCGGCTGAAAACTTCCACAGAGAGGGCACACAAGATATAGTAAATACAACAAAGAAAGTGGTGCTCCCTTCATTAACTCCATGCAAAGAGGACAAAACTGGATCATCTCTTAGGAAGGCACTTTCCCCCATTTCTTCAAACATGGATCCTCAAAAGCAACGGACAGCTGATGATAGCAATTGCTTGATGTTGTTGGAGCTGAGAACTCCAATGGGATCATGCAACATAGTAGGGAAGGTCACAGGTGCTACACCCCTTGATAAATTTATTGCACTTGGCTCTAACCTGAAGGAATCTCTTATTCAGCAATACCTTGATTTCTTAAATGTTGCAAACAAGGAAGAACTACAGAAGTTGAAAGGCATTGGTGAAAGGAGGGCAGAGTACATTCTTGAGCTTCGAGAAGATTCGCCCAGACCATTTAAATCTCTTTCAGATTTGGGAAATATTGGTCTATCATCAAAACAGATACAAGATATTTTGTGCAAGACAGCGACTGGAATCTTCAAATGATCACCGGAATGGAAATGCCACCGAACTCTACCACTTTGAAGATGCTGGCTCATATTAACGGTCAGATTGTTGTGGGCTATTGACTTGTGATTATCAGCCAGGTCTGCCGCTGAATCAAGTTAGCTCCCTCCTGTATTGCCGAATTTAAGCAATCTGTAGTTTGTGTACCATCCATGATTCCTTGGGTGTAATTGTAGCTGTAGTCATCTGATGTACTACTAGAGTATGGAGCAATGGTTGCTCCTCTCTGTTGTAGATTTTCTCCGAGAAACCGCCGTTTAATTTGAGCTGACTTGCACGAGCAGCAGGAAATGAAATTTGTGGAATAAAAAAAA]

[+] EMBL AK073413             [TCGCTCCCAGTCTCCCTCGTCGTCTCCTCCTCCTCCTCCTCCATCCGCCGCCGCCACCGGCCTCGTCCTCTCTCCTTCGATGGCGACCGCCGCCGCCACGCAGTCGCAGCCGGTGCGCGTCGTGCTACGGGTGCGCCCGCACCTCCCGTCCGAGGCGAACTCCGCGGAGGCGCCGTGCGTCGGGCTTCTCGGGAGCCACCCCGGCGGCGAGGTCACCGTCCAGCTCAAGGACCAGTACACCAGCCGGAACGAGTGCTATAAGCTGGACGCTTTCTTCGGCCAAGAGAGCCGTGTCTGCGAGATATTCGATCAGGAGGTCAGCGCCGTGATCCCGGGAATCTTCGAGGGGACCAACGCGACGGTCTTCGCCTATGGCGCTACCGGCAGCGGCAAGACCTACACGATGCAGGGCACTGAGGATTTGCCGGGGCTCATCCCCTTGGCGGTTTCGACCGTGTTGGCGCTATGTACTGGCACATGGTGCTCTGTTGAGATCTCATACTATGAGGTATACATGGAGCGGTGCTATGACTTGCTAGAGCCCAAGGCAAGAGAGATCATGGTGCTGGATGACAAAGATGGCAACTTACAGCTAAAGGGCTTGGCCTGGGTGCCTGTGCGATCTCTGGAGGAATTCCACGAGATATACTCTATAGGAGTGCAGAGGAGAAAAGTTGCCCACACAGGCCTGAACGATGTTTCAAGTAGGAGCCATGCTGTGCTATCGATCAGGATTACTACTGATGTTGTTAAAGGGAAGCTTAACCTCATCGACTTGGCTGGTAATGAGGACAACCGGAGAACTTGCAATGAGGGGATCCGGCTACAAGAGAGCGCCAAGATCAACCAGTCGCTGTTTGCGTTGTCTAATGTCATATCGGCTCTCAACAAGAAAGAGCCACGGATACCATACAGAGAGAGTAAATTGACCCGCATACTGCAAGATTCTCTTGGAGGCAATAGCCATGCTGTCATGATAGCATGCCTTAATCCCGTGGAATACCAGGAGGCAGTCCACACAGTAAGCTTGGCTGCTCGTTCGCGCCATGTTACGAACCACATGAGTTCAGCAAGCAAGCAAGAGACTCCTAAAGATAAGGTTGACATGGAAGCCAAATTGCGAGCTTGGTTGGAATCCAAGGGGAAAACGAAGAGCATACAAAGAATGGATGGACTTCTCTCCCCAAATGCAATCAAGACTCCTCTATCCATGAGCCATAAGAAGCAATCAGCATCTGGCAGGGTTTCTGGTAGAGGTAAAGCAATGGATCAAGATGGTGGTAAAATCAAGAAGGTGCTTTTTGACTCAGCAGCCCGTATTCCGGCTGAAAACTTCCACAGAGAGGGCACACAAGATATAGTAAATACAACAAAGAAAGTGGTGCTCCCTTCATTAACTCCATGCAAAGAGGACAAAACTGGATCATCTCTTAGGAAGGCACTTTCCCCCATTTCTTCAAACATGGATCCTCAAAAGCAACGGACAGCTGATGATAGCAATTGCTTGATGTTGTTGGAGCTGAGAACTCCAATGGGATCATGCAACATAGTAGGGAAGGTCACAGGTGCTACACCCCTTGATAAATTTATTGCACTTGGCTCTAACCTGAAGGAATCTCTTATTCAGCAATACCTTGATTTCTTAAATGTTGCAAACAAGGAAGAACTACAGAAGTTGAAAGGCATTGGTGAAAGGAGGGCAGAGTACATTCTTGAGCTTCGAGAAGATTCGCCCAGACCATTTAAATCTCTTTCAGATTTGGGAAATATTGGTCTATCATCAAAACAGATACAAGATATTTTGTGCAAGACAGCGACTGGAATCTTCAAATGATCACCGGAATGGAAATGCCACCGAACTCTACCACTTTGAAGATGCTGGCTCATATTAACGGTCAGATTGTTGTGGGCTATTGACTTGTGATTATCAGCCAGGTCTGCCGCTGAATCAAGTTAGCTCCCTCCTGTATTGCCGAATTTAAGCAATCTGTAGTTTGTGTACCATCCATGATTCCTTGGGTGTAATTGTAGCTGTAGTCATCTGATGTACTACTAGAGTATGGAGCAATGGTTGCTCCTCTCTGTTGTAGATTTTCTCCGAGAAACCGCCGTTTAATTTGAGCTGACTTGCACGAGCAGCAGGAAATG                     ]
[+] EMBL AU108655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTTTGGCGCTATGTACTGGCACATGGTGCTCTGTTGAGATCTCATACTATGAGGTATACATGGAGCGGTGCTATGACTTGCTAGAGCCCAAGGCAAGAGAGATCATGGTGCTGGATGACAAAGATGGCAACTTACAGCTAAAGGGCTTGGCCTGGGTGCCTGTNCGATCTNTGGAGGAATTCCACGAGATATACTNTATAGGAGTNCAGAGGAGAAAAGTTGCCCACACAGGNCTGAACGATGTTTCAAGTAGGAGCCATGCTGTGCTATCGATCAGGNTTACTACTGATGTTGTTAAAGGGAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK104040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTGCTATGACTTGCTAGAGCCCAAGGCAAGAGAGATCATGGTGCTGGATGACAAAGATGGCAACTTACAGCTAAAGGGCTTGGCCTGGGTGCCTGTGCGATCTCTGGAGGAATTCCACGAGATATACTCTATAGGAGTGCAGAGGAGAAAAGTTGCCCACACAGGCCTGAACGATGTTTCAAGTAGGAGCCATGCTGTGCTATCGATCAGGATTACTACTGATGTTGTTAAAGGGAAGCTTAACCTCATCGACTTGGCTGGTAATGAGGACAACCGGAGAACTTGCAATGAGGGGATCCGGCTACAAGAGAGCGCCAAGATCAACCAGTCGCTGTTTGCGTTGTCTAATGTCATATCGGCTCTCAACAAGAAAGAGCCACGGATACCATACAGAGAGAGTAAATTGACCCGCATACTGCAAGATTCTCTTGGAGGCAATAGCCATGCTGTCATGATAGCATGCCTTAATCCCGTGGAATACCAGGAGGCAGTCCACACAGTAAGCTTGGCTGCTCGTTCGCGCCATGTTACGAACCACATGAGTTCAGCAAGCAAGCAAGAGACTCCTAAAGATAAGGTTGACATGGAAGCCAAATTGCGAGCTTGGTTGGAATCCAAGGGGAAAACGAAGAGCATACAAAGAATGGATGGACTTCTCTCCCCAAATGCAATCAAGACTCCTCTATCCATGAGCCATAAGAAGCAATCAGCATCTGGCAGGGTTTCTGGTAGAGGTAAAGCAATGGATCAAGATGGTGGTAAAATCAAGAAGGTGCTTTTTGACTCAGCAGCCCGTATTCCGGCTGAAAACTTCCACAGAGAGGGCACACAAGATATAGTAAATACAACAAAGAAAGTGGTGCTCCCTTCATTAACTCCATGCAAAGAGGACAAAACTGGATCATCTCTTAGGAAGGCACTTTCCCCCATTTCTTCAAACATGGATCCTCAAAAGCAACGGACAGCTGATGATAGCAATTGCTTGATGTTGTTGGAGCTGAGAACTCCAATGGGATCATGCAACATAGTAGGGAAGGTCACAGGTGCTACACCCCTTGATAAATTTATTGCACTTGGCTCTAACCTGAAGGAATCTCTTATTCAGCAATACCTTGATTTCTTAAATGTTGCAAACAAGGAAGAACTACAGAAGTTGAAAGGCATTGGTGAAAGGAGGGCAGAGTACATTCTTGAGCTTCGAGAAGATTCGCCCAGACCATTTAAATCTCTTTCAGATTTGGGAAATATTGGTCTATCATCAAAACAGATACAAGATATTTTGTGCAAGACAGCGACTGGAATCTTCAAATGATCACCGGAATGGAAATGCCACCGAACTCTACCACTTTGAAGATGCTGGCTCATATTAACGGTCAGATTGTTGTGGGCTATTGACTTGTGATTATCAGCCAGGTCTGCCGCTGAATCAAGTTAGCTCCCTCCTGTATTGCCGAATTTAAGCAATCTGTAGTTTGTGTACCATCCATGATTCCTTGGGTGTAATTGTAGCTGTAGTCATCTGATGTACTACTAGAGTATGGAGCAATGGTTGCTCCTCTCTGTTGTAGATTTTCTCCGAGAAACCGCCGTTTAATTTGAGCTGACTTGCAC                                    ]
[+] EMBL AU068369             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGACAGCGACTGGAA CCTCAAATGATCACCGGAATGGAAATGCCACCGAACTCTACCACTTTGAAGATGCTGGCTCATATTANCGGTCAGATTGTTGTGGGCTATTGACTTGTGATTATCAGCCAGGTCTGCCGCTGAATCAAGTTAGCNCCCTCCTGTATTGCCGAATTTAAGCAATCTGTAGTTTGTGTACCANCCATGATNCCTTGGGTGTAATTGTAGCTGTAGTCATCTGATGTACTACTAGAGTATGGAGCAATGGTTGCNCCTCTCTGTTGTAGATTTTCTCCGAGAAACCGCCGTTTAATTTGAGCTGACTTGCACGAGCANCAGGAAATGAAATTTGTGGAATAAAAAAAA]


>consensus_7116#0 TCGCTCCCAGTCTCCCTCGTCGTCTCCTCCTCCTCCTCCTCCATCCGCCGCCGCCACCGG CCTCGTCCTCTCTCCTTCGATGGCGACCGCCGCCGCCACGCAGTCGCAGCCGGTGCGCGT CGTGCTACGGGTGCGCCCGCACCTCCCGTCCGAGGCGAACTCCGCGGAGGCGCCGTGCGT CGGGCTTCTCGGGAGCCACCCCGGCGGCGAGGTCACCGTCCAGCTCAAGGACCAGTACAC CAGCCGGAACGAGTGCTATAAGCTGGACGCTTTCTTCGGCCAAGAGAGCCGTGTCTGCGA GATATTCGATCAGGAGGTCAGCGCCGTGATCCCGGGAATCTTCGAGGGGACCAACGCGAC GGTCTTCGCCTATGGCGCTACCGGCAGCGGCAAGACCTACACGATGCAGGGCACTGAGGA TTTGCCGGGGCTCATCCCCTTGGCGGTTTCGACCGTGTTGGCGCTATGTACTGGCACATG GTGCTCTGTTGAGATCTCATACTATGAGGTATACATGGAGCGGTGCTATGACTTGCTAGA GCCCAAGGCAAGAGAGATCATGGTGCTGGATGACAAAGATGGCAACTTACAGCTAAAGGG CTTGGCCTGGGTGCCTGTGCGATCTCTGGAGGAATTCCACGAGATATACTCTATAGGAGT GCAGAGGAGAAAAGTTGCCCACACAGGCCTGAACGATGTTTCAAGTAGGAGCCATGCTGT GCTATCGATCAGGATTACTACTGATGTTGTTAAAGGGAAGCTTAACCTCATCGACTTGGC TGGTAATGAGGACAACCGGAGAACTTGCAATGAGGGGATCCGGCTACAAGAGAGCGCCAA GATCAACCAGTCGCTGTTTGCGTTGTCTAATGTCATATCGGCTCTCAACAAGAAAGAGCC ACGGATACCATACAGAGAGAGTAAATTGACCCGCATACTGCAAGATTCTCTTGGAGGCAA TAGCCATGCTGTCATGATAGCATGCCTTAATCCCGTGGAATACCAGGAGGCAGTCCACAC AGTAAGCTTGGCTGCTCGTTCGCGCCATGTTACGAACCACATGAGTTCAGCAAGCAAGCA AGAGACTCCTAAAGATAAGGTTGACATGGAAGCCAAATTGCGAGCTTGGTTGGAATCCAA GGGGAAAACGAAGAGCATACAAAGAATGGATGGACTTCTCTCCCCAAATGCAATCAAGAC TCCTCTATCCATGAGCCATAAGAAGCAATCAGCATCTGGCAGGGTTTCTGGTAGAGGTAA AGCAATGGATCAAGATGGTGGTAAAATCAAGAAGGTGCTTTTTGACTCAGCAGCCCGTAT TCCGGCTGAAAACTTCCACAGAGAGGGCACACAAGATATAGTAAATACAACAAAGAAAGT GGTGCTCCCTTCATTAACTCCATGCAAAGAGGACAAAACTGGATCATCTCTTAGGAAGGC ACTTTCCCCCATTTCTTCAAACATGGATCCTCAAAAGCAACGGACAGCTGATGATAGCAA TTGCTTGATGTTGTTGGAGCTGAGAACTCCAATGGGATCATGCAACATAGTAGGGAAGGT CACAGGTGCTACACCCCTTGATAAATTTATTGCACTTGGCTCTAACCTGAAGGAATCTCT TATTCAGCAATACCTTGATTTCTTAAATGTTGCAAACAAGGAAGAACTACAGAAGTTGAA AGGCATTGGTGAAAGGAGGGCAGAGTACATTCTTGAGCTTCGAGAAGATTCGCCCAGACC ATTTAAATCTCTTTCAGATTTGGGAAATATTGGTCTATCATCAAAACAGATACAAGATAT TTTGTGCAAGACAGCGACTGGAATCTTCAAATGATCACCGGAATGGAAATGCCACCGAAC TCTACCACTTTGAAGATGCTGGCTCATATTAACGGTCAGATTGTTGTGGGCTATTGACTT GTGATTATCAGCCAGGTCTGCCGCTGAATCAAGTTAGCTCCCTCCTGTATTGCCGAATTT AAGCAATCTGTAGTTTGTGTACCATCCATGATTCCTTGGGTGTAATTGTAGCTGTAGTCA TCTGATGTACTACTAGAGTATGGAGCAATGGTTGCTCCTCTCTGTTGTAGATTTTCTCCG AGAAACCGCCGTTTAATTTGAGCTGACTTGCACGAGCAGCAGGAAATGAAATTTGTGGAA TAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)