Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7118 cluster # 7118       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7118#0 length = 1755 sequences # 4  

consensusID : consensus_7118#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1755
fasta sequence
                              [CTCCCGCAACAAATACCCCCTCCTTCACCCCTCTGGACGCGACGCCGGCATCAGTAATTGAGCGCCGCGGCGGCGGAGGCGGGCGAGGCTGCAGACGCCGACGAGGGCTGAGCCGGA-CCCACCCACCCACCGAGCGCCGTGGCTTGGGCGGCCGGGGAGAGGGAGGGAGTGGTTGGTGAGCTCTAATGGCGGGCCTCCCCTTTCTCCTCGCGCTCCACATCGCACTGCTGCTGCTTCTTCCCTGCTCCTGCCAGGTTGGGGATTCGTGCTCGTCGGCGCGCGACTGCGGCGCCGGCCTCTACTGCGGCAATTGCGCCGCCACCGGCAAGACCCGGCCGTCCT-GCATCAGAGACCTGGCGATCCAGCCTACCTCCATTGTGAAGGGACTGCCCTTCAACCGCTACTCATGGCTGGTCACCCACAACTCCTTCTCCATCATAGGCGAGCCGTCGCACACCGGAGTCGAGAGGGTCACGTTCTACAACCAGGAGGACACTGTCACTAACCAATTGAGGAATGGAGTGAGGGGATTGATGCTGGATATGTATGACTTCAATGATGATATCTGGCTCTGCCACTCCTTGCAAGGCCAATGCTACAACTTCACTGCTTTTCAACCAGCAATTGACACATTGAAAGAGGTGGAAGCATTTCTATCTGAGAATCCGACAGAGATAATAACAATATTCATTGAGGATTACGTCCATTCAACGATGGGATTGAGCAAATTGTTTACTGCTGCTGACTTGACGAAATATTGGTACCCTATCTCAGAAATGCCAACTAATGGAAAGGACTGGCCAAGTGTCACAGATATGGTTGCAAAGAACCACAGGTTGCTAGTGTTTACTTCTGATTCTTCAAAGGAGGCTAGCGAAGGAATAGCATACCAGTGGAGTTATCTGCTGGAGAATGAGTCTGGAGATCCAGGGATCACTGGTTCTTGTCCAAATAGAAAGGAATCACAACCACTAAACTCAAGATCTGCATCTCTGTTTATGCAAAATTACTTCCCCACAATTCCTGTAGAGAATGAAGCGTGTAAAGAGAATTCTGTTGGACTACCACAGATGGTCCAAACTTGCTATACTGCAGCTGGAAATAGAATCCCTAACTTCATAGCTGTGAATTACTACATGCGAAGCGATGGTGGGGGTGTTTTTGATGTTCAAGACAGGATCAATGGCGTGACACTATGTGGCTGCAACACCATTGCTGCTTGCCAGGCTGGGGCACCAGCGGGCGCATGCAAGGACACCGGAGCCCCTAACCGGACTTCCTCTTCTGTAAATGGAAACGTATATTCAGGAACTATAGAATTCAAGTCACCTGCTTCAGCAGCCAGCATTTCGAATGCTAACATCCCTAGTAAATTTGTTAGTTTGCTACTGCTAGGTCTTGTGTTGATCATTAAGCCGTTTTGATCTTTCAGGCATTCTTTTTTTCTTTTGATGAGTTTGCCACGTTTCTTTTTCGTTTTTAATGTCTCCTATGTGATGGGATTACAATTACAGTAAGTAATCTTGTTAGCCATCTAGGCTAGAATAGATTCAGAGAGTTACGGTCTGGTCTGTTTGGCTGTCTGACCTGAGAAATTTCCTCTCATGCCTGCTCGATATGTTCTAGGCTAGCACCTTACGTTGTACCCATCACGAAGTAATACAAAGAAATTGAATGGATTAATGGTCCTATGGGTTGGCACCAATGTTCTACACGGTGTGAACTTACACGAAATATGTTAGAATGTTTGAAAAA]

[+] EMBL AK060378             [CTCCCGCAACAAATACCCCCTCCTTCACCCCTCTGGACGCGACGCCGGCATCAGTAATTGAGCGCCGCGGCGGCGGAGGCGGGCGAGGCTGCAGACGCCGACGAGGGCTGAGCCGGA CCCACCCACCCACCGAGCGCCGTGGCTTGGGCGGCCGGGGAGAGGGAGGGAGTGGTTGGTGAGCTCTAATGGCGGGCCTCCCCTTTCTCCTCGCGCTCCACATCGCACTGCTGCTGCTTCTTCCCTGCTCCTGCCAGGTTGGGGATTCGTGCTCGTCGGCGCGCGACTGCGGCGCCGGCCTCTACTGCGGCAATTGCGCCGCCACCGGCAAGACCCGGCCGTCCT GCATCAGAGACCTGGCGATCCAGCCTACCTCCATTGTGAAGGGACTGCCCTTCAACCGCTACTCATGGCTGGTCACCCACAACTCCTTCTCCATCATAGGCGAGCCGTCGCACACCGGAGTCGAGAGGGTCACGTTCTACAACCAGGAGGACACTGTCACTAACCAATTGAGGAATGGAGTGAGGGGATTGATGCTGGATATGTATGACTTCAATGATGATATCTGGCTCTGCCACTCCTTGCAAGGCCAATGCTACAACTTCACTGCTTTTCAACCAGCAATTGACACATTGAAAGAGGTGGAAGCATTTCTATCTGAGAATCCGACAGAGATAATAACAATATTCATTGAGGATTACGTCCATTCAACGATGGGATTGAGCAAATTGTTTACTGCTGCTGACTTGACGAAATATTGGTACCCTATCTCAGAAATGCCAACTAATGGAAAGGACTGGCCAAGTGTCACAGATATGGTTGCAAAGAACCACAGGTTGCTAGTGTTTACTTCTGATTCTTCAAAGGAGGCTAGCGAAGGAATAGCATACCAGTGGAGTTATCTGCTGGAGAATGAGTCTGGAGATCCAGGGATCACTGGTTCTTGTCCAAATAGAAAGGAATCACAACCACTAAACTCAAGATCTGCATCTCTGTTTATGCAAAATTACTTCCCCACAATTCCTGTAGAGAATGAAGCGTGTAAAGAGAATTCTGTTGGACTACCACAGATGGTCCAAACTTGCTATACTGCAGCTGGAAATAGAATCCCTAACTTCATAGCTGTGAATTACTACATGCGAAGCGATGGTGGGGGTGTTTTTGATGTTCAAGACAGGATCAATGGCGTGACACTATGTGGCTGCAACACCATTGCTGCTTGCCAGGCTGGGGCACCAGCGGGCGCATGCAAGGACACCGGAGCCCCTAACCGGACTTCCTCTTCTGTAAATGGAAACGTATATTCAGGAACTATAGAATTCAAGTCACCTGCTTCAGCAGCCAGCATTTCGAATGCTAACATCCCTAGTAAATTTGTTAGTTTGCTACTGCTAGGTCTTGTGTTGATCATTAAGCCGTTTTGATCTTTCAGGCATTCTTTTTTTCTTTTGATGAGTTTGCCACGTTTCTTTTTCGTTTTTAATGTCTCCTATGTGATGGGATTACAATTACAGTAAGTAATCTTGTTAGCCATCTAGGCTAGAATAGATTCAGAGAGTTACGGTCTGGTCTGTTTGGCTGTCTGACCTGAGAAATTTCCTCTCATGCCTGCTCGATATGTTCTAGGCTAGCACCTTACGTTGTACCCATCACGAAGTAATACAAAGAAATTGAGTGGATTAATGGTCCTATGGGTTGGC                                                       ]
[+] EMBL AU075499             [            ATACCCCCT CTTCA CCCTCTAGACGCGACGCCGGCATCAGTAATTGAGCGCCGCGACGGC GAGGCGGGCGAGGCTGCAGACGACGACGAGGGCTGAGCCGGACCCCACCCACCCACCGAGCGCCGTGGCTTGGGCGGCCGNGGAGAGGGAGGGAGTGGTTGGTGAGCTCTAATGGCGGGCCTCCCCTTTCTCCTCGCGCTCCACATCGCACTGCTGCTGCTTCTTCCTTGCTCCTGCCAGGTTGGGGATTCGTGCTCGTCGGCGCGCGACTGCGGCGCCGGCCTCTACTGCGGCAATTGCGCCGCCACCGGCAAGACCCGGCCGTCCTGGCATCAGAGACCTGGCGATCCAGCCTACCTCCATTGTGAAGGGACTGCCCTTCAACCGCTACTCATGGCTGGTCACCCACAACTCCTTCTCCATCATAGGCGAGCCGTCGCACANCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK099343             [                                              GGCATCAGTAATTGAGCGCCGCGGCGGCGGAGGCGGGCGAGGCTGCAGACGCCGACGAGGGCTGAGCCGGA CCCACCCACCCACCGAGCGCCGTGGCTTGGGCGGCCGGGGAGAGGGAGGGAGTGGTTGGTGAGCTCTAATGGCGGGCCTCCCCTTTCTCCTCGCGCTCCACATCGCACTGCTGCTGCTTCTTCCCTGCTCCTGCCAGGTTGGGGATTCGTGCTCGTCGGCGCGCGACTGCGGCGCCGGCCTCTACTGCGGCAATTGCGCCGCCACCGGCAAGACCCGGCCGTCCT GCATCAGAGACCTGGCGATCCAGCCTACCTCCATTGTGAAGGGACTGCCCTTCAACCGCTACTCATGGCTGGTCACCCACAACTCCTTCTCCATCATAGGCGAGCCGTCGCACACCGGAGTCGAGAGGGTCACGTTCTACAACCAGGAGGACACTGTCACTAACCAATTGAGGAATGGAGTGAGGGGATTGATGCTGGATATGTATGACTTCAATGATGATATCTGGCTCTGCCACTCCTTGCAAGGCCAATGCTACAACTTCACTGCTTTTCAACCAGCAATTGACACATTGAAAGAGGTGGAAGCATTTCTATCTGAGAATCCGACAGAGATAATAACAATATTCATTGAGGATTACGTCCATTCAACGATGGGATTGAGCAAATTGTTTACTGCTGCTGACTTGACGAAATATTGGTACCCTATCTCAGAAATGCCAACTAATGGAAAGGACTGGCCAAGTGTCACAGATATGGTTGCAAAGAACCACAGGTTGCTAGTGTTTACTTCTGATTCTTCAAAGGAGGCTAGCGAAGGAATAGCATACCAGTGGAGTTATCTGCTGGAGAATGAGTCTGGAGATCCAGGGATCACTGGTTCTTGTCCAAATAGAAAGGAATCACAACCACTAAACTCAAGATCTGCATCTCTGTTTATGCAAAATTACTTCCCCACAATTCCTGTAGAGAATGAAGCGTGTAAAGAGAATTCTGTTGGACTACCACAGATGGTCCAAACTTGCTATACTGCAGCTGGAAATAGAATCCCTAACTTCATAGCTGTGAATTACTACATGCGAAGCGATGGTGGGGGTGTTTTTGATGTTCAAGACAGGATCAATGGCGTGACACTATGTGGCTGCAACACCATTGCTGCTTGCCAGGCTGGGGCACCAGCGGGCGCATGCAAGGACACCGGAGCCCCTAACCGGACTTCCTCTTCTGTAAATGGAAACGTATATTCAGGAACTATAGAATTCAAGTCACCTGCTTCAGCAGCCAGCATTTCGAATGCTAACATCCCTAGTAAATTTGTTGGTTTGCTACTGCTAGGTCTTGTGTTGATCATTAAGCCGTTTTGATCTTTCAGGCATTCTTTTTTTCTTTTGATGAGTTTGCCACGTTTCTTTTTCGTTTTTAATGTCTCCTATGTGATGGGATTACAATTACAGTAAGTAATCTTGTTAGCCATCTAGGCTAGAATAGATTCAGAGAGTTACGGTCTGGTCTGTTTGGCTGTCTGACCTGAGAAATTTCCTCTCATGCCTGCTCGATATGTTCTAGGCTAGCACCTTACGTTGTACCCATCACGAAGTAATACAAAGAAATTGAATGGATTAATGGTCCTATG                                                              ]
[+] EMBL AU075498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGCCACGTTTCTTTTTCGTTTTTAATGTCTCCTATGTGATGGGATTACAATTACAGTAAGTAATCTTGTTAGCCATCTAGGCTAGAATAGATTCAGAGAGTTACGGTCTGGTCTGTTTGGCTGTCTGACCTGAGAAATTTCCTCTCATGCCTGCTCGATATGTTCTAGGCTAGCACCTTACGTTGTACCCATCACGAAGTAATACAAAGAAATTGAATGGATTAATGGTCCTATGGGTTGGCACCAATGTTCTACACGGTGTGAACTTACACGAAATATGTTAGAATGTTTGAAAAA]


>consensus_7118#0 CTCCCGCAACAAATACCCCCTCCTTCACCCCTCTGGACGCGACGCCGGCATCAGTAATTG AGCGCCGCGGCGGCGGAGGCGGGCGAGGCTGCAGACGCCGACGAGGGCTGAGCCGGACCC ACCCACCCACCGAGCGCCGTGGCTTGGGCGGCCGGGGAGAGGGAGGGAGTGGTTGGTGAG CTCTAATGGCGGGCCTCCCCTTTCTCCTCGCGCTCCACATCGCACTGCTGCTGCTTCTTC CCTGCTCCTGCCAGGTTGGGGATTCGTGCTCGTCGGCGCGCGACTGCGGCGCCGGCCTCT ACTGCGGCAATTGCGCCGCCACCGGCAAGACCCGGCCGTCCTGCATCAGAGACCTGGCGA TCCAGCCTACCTCCATTGTGAAGGGACTGCCCTTCAACCGCTACTCATGGCTGGTCACCC ACAACTCCTTCTCCATCATAGGCGAGCCGTCGCACACCGGAGTCGAGAGGGTCACGTTCT ACAACCAGGAGGACACTGTCACTAACCAATTGAGGAATGGAGTGAGGGGATTGATGCTGG ATATGTATGACTTCAATGATGATATCTGGCTCTGCCACTCCTTGCAAGGCCAATGCTACA ACTTCACTGCTTTTCAACCAGCAATTGACACATTGAAAGAGGTGGAAGCATTTCTATCTG AGAATCCGACAGAGATAATAACAATATTCATTGAGGATTACGTCCATTCAACGATGGGAT TGAGCAAATTGTTTACTGCTGCTGACTTGACGAAATATTGGTACCCTATCTCAGAAATGC CAACTAATGGAAAGGACTGGCCAAGTGTCACAGATATGGTTGCAAAGAACCACAGGTTGC TAGTGTTTACTTCTGATTCTTCAAAGGAGGCTAGCGAAGGAATAGCATACCAGTGGAGTT ATCTGCTGGAGAATGAGTCTGGAGATCCAGGGATCACTGGTTCTTGTCCAAATAGAAAGG AATCACAACCACTAAACTCAAGATCTGCATCTCTGTTTATGCAAAATTACTTCCCCACAA TTCCTGTAGAGAATGAAGCGTGTAAAGAGAATTCTGTTGGACTACCACAGATGGTCCAAA CTTGCTATACTGCAGCTGGAAATAGAATCCCTAACTTCATAGCTGTGAATTACTACATGC GAAGCGATGGTGGGGGTGTTTTTGATGTTCAAGACAGGATCAATGGCGTGACACTATGTG GCTGCAACACCATTGCTGCTTGCCAGGCTGGGGCACCAGCGGGCGCATGCAAGGACACCG GAGCCCCTAACCGGACTTCCTCTTCTGTAAATGGAAACGTATATTCAGGAACTATAGAAT TCAAGTCACCTGCTTCAGCAGCCAGCATTTCGAATGCTAACATCCCTAGTAAATTTGTTA GTTTGCTACTGCTAGGTCTTGTGTTGATCATTAAGCCGTTTTGATCTTTCAGGCATTCTT TTTTTCTTTTGATGAGTTTGCCACGTTTCTTTTTCGTTTTTAATGTCTCCTATGTGATGG GATTACAATTACAGTAAGTAATCTTGTTAGCCATCTAGGCTAGAATAGATTCAGAGAGTT ACGGTCTGGTCTGTTTGGCTGTCTGACCTGAGAAATTTCCTCTCATGCCTGCTCGATATG TTCTAGGCTAGCACCTTACGTTGTACCCATCACGAAGTAATACAAAGAAATTGAATGGAT TAATGGTCCTATGGGTTGGCACCAATGTTCTACACGGTGTGAACTTACACGAAATATGTT AGAATGTTTGAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)