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Oryza sativa
cluster # 7128 cluster # 7128       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7128#0 length = 1338 sequences # 4  

consensusID : consensus_7128#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1338
fasta sequence
                              [GTCAAACCAATGGAAAGAGGAATTGTACGTTGCATTCTGCCGGCCGCGGCAATGCTCGCAGTTGTAGTCGTCGTCGTTGCCGTGCTGCTGCCGCTCGCCGCGGCGCAGCAGACCATGCAGTTCTCGTCATGCGCCAGCGGCGCCTACGCGGCGAACAGCACGTACGAGGCGAACCTCGCCGTCCTCGCGGCGGCGCTCCCGGGCAACGCGTCCACCGCGGCGGCGGCCGGCTACGCCACGGCCACCGTCGGCGCGGTGCCCGACCAGGTGTCCGCGCTGGCGCTGTGCCGCGGCGACGCGAACGCCACGGCGTGCCGCGCGTGCGTCGCGGCGTCGTTCCGCGTCGCGCGGCGGGACTGCCCCAGCAGCAAGGACGCCACCACCTACCAGGACGGCTGCATCGTCCGCTTCTCCGACCAGCGGTTCCTCGACTTCGTCGGCGTGAACTCGCCGGTCAGCGAGCTCTACTCCGACGCCGACAGCAACATCACGGCCGTCCCGGTGGCCTGGTTCAACGCCGCCGTCGTCGCGCTGATGAACGCGACGGTGGACACGGCCGTGGCCGCCGGCAGCGGCAGCAACAACACCAAGAAGTACTTCGCCACGGCGGTGGAGGACTTCGACCCGAAGCACTACCCGAAGATTTACGGGATGGCGCAGTGCGCGCCGGTGATGACGGCGGCGCAGTGCCGGAGCTGCCTCGGCGGCTTCGTCTCGTCGATCCCATGGTTCTTGAACGGGAAGCCCGGAGGGAGAGTTCTTGGGATTTGGTGCAACCTGAGGTACAGCGTGAAGCCGTTCTATCAGGGCCAGCCAATGCTGCAGATTTCTGCGCCGCCGGAGCCACCGCCGCCGGCCATGCCTTCACTTGCTGCTCCGCCGACTAGAACAGCGAGGAGAAGGAGAGTTGCAGGGATCTCTGCAGGCGTCGCTTGCTTCGTTGTCTTGATGTTGATACTGTCAGCTTATGCTTTCATTCGTTTCAAGAGAAAGAAGGCTGCAAAGAAAGACAACTTATTGAAGAAAATGGCAAGAGGAAAATGCACGATCTTTGATTTGGCTACACTGAAAGAGGCAACTGAGAACTTCTCAGAGAAGCATAAGCTTGGAGAAGGCGGATTTGGTACTGTATATAAGGGAAAATTACCAGACGGCCAAGAAATAGCAGTAAAGAAGCTCATAGAAAGTTGTGGGCATGGACTGAATCAGCTACACAATGAAGTGCTGGTGTTGGCAGAGCTTCAGCACAAGAACCTTGTTAGGCTACAGGGGTTTTGCGTCCATAAGGATGAGATGTTGCTTGTTTATGAATACATAAAAAATGGGAGCCTCGACAAC]

[+] EMBL CB634501             [GTCAAACCAATGGAAAGAGGAATTGTACGTTGCATTCTGCCGGCCGCGGCAATGCTCGCAGTTGTAGTCGTCGTCGTTGCCGTGCTGCTGCCGCTCGCCGCGGCGCAGCAGACCATGCAGTTCTCGTCATGCGCCAGCGGCGCCTACGCGGCGAACAGCACGTACGAGGCGAACCTCGCCGTCCTCGCGGCGGCGCTCCCGGGCAACGCGTCCACCGCGGCGGCGGCCGGCTACGCCACGGCCACCGTCGGCGCGGTGCCCGACCAGGTGTCCGCGCTGGCGCTGTGCCGCGGCGACGCGAACGCCACGGCGTGCCGCGCGTGCGTCGCGGCGTCGTTCCGCGTCGCGCGGCGGGACTGCCCCAGCAGCAAGGACGCCACCACCTACCAGGACGGCTGCATCGTCCGCTTCTCCGACCAGCGGTTCCTCGACTTCGTCGGCGTGAACTCGCCGGTCAGCGAGCTCTACTCCGACGCCGACAGCAACATCACGGCCGTCCCGGTGGCCTGGTTCAACGCCGCCGTCGTCGCGCTGATGAACGCGACGGTGGACACGGCCGTGGCCGCCGGCAGCGGCAGCAACAACACCAAGAAGTACTTCGCCACGGCGGTGGAGGACTTCGACCCGAAGCACTACCCGAAGATTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB632756             [                         TACGTTGCATTCTGCCGGCCGCGGCAATGCTCGCAGTTGTAGTCGTCGTCGTTGCCGTGCTGCTGCCGCTCGCCGCGGCGCAGCAGACCATGCAGTTCTCGTCATGCGCCAGCGGCGCCTACGCGGCGAACAGCACGTACGAGGCGAACCTCGCCGTCCTCGCGGCGGCGCTCCCGGGCAACGCGTCCACCGCGGCGGCGGCCGGCTACGCCACGGCCACCGTCGGCGCGGTGCCCGACCAGGTGTCCGCGCTGGCGCTGTGCCGCGGCGACGCGAACGCCACGGCGTGCCGCGCGTGCGTCGCGGCGTCGTTCCGCGTCGCGCGGCGGGACTGCCCCAGCAGCAAGGACGCCACCACCTACCAGGACGGCTGCATCGTCCGCTTCTCCGACCAGCGGTTCCTCGACTTCGTCGGCGTGAACTCGCCGGTCAGCGAGCTCTACTCCGACGCCGACAGCAACATCACGGCCGTCCCGGTGGCCTGGTTCAACGCCGCCGTCGTCGCGCTGATGAACGCGACGGTGGACACGGCCGTGGCCGCCGGCAGCGGCAGCAACAACACCAAGAAGTACTTCGCCACGGCGGTGGAGGACTTCGACCCGAAGCACTACCCGAAGATTTACGGGATGGCGCAGTGCGCGCCGGTGATGACGGCGGCGCAGTGCCGGAGCTGCCTCGGCGGCTTCGTCTCGTCGATCCCATGGTTCTTGAACGGGAAGCCCGGAGGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB628015             [                           CGTTGCATTCTGCCGGCCGCGGCAATGCTCGCAGTTGTAGTCGTCGTCGTTGCCGTGCTGCTGCCGCTCGCCGCGGCGCAGCAGACCATGCAGTTCTCGTCATGCGCCAGCGGCGCCTACGCGGCGAACAGCACGTACGAGGCGAACCTCGCCGTCCTCGCGGCGGCGCTCCCGGGCAACGCGTCCACCGCGGCGGCGGCCGGCTACGCCACGGCCACCGTCGGCGCGGTGCCCGACCAGGTGTCCGCGCTGGCGCTGTGCCGCGGCGACGCGAACGCCACGGCGTGCCGCGCGTGCGTCGCGGCGTCGTTCCGCGTCGCGCGGCGGGACTGCCCCAGCAGCAAGGACGCCACCACCTACCAGGACGGCTGCATCGTCCGCTTCTCCGACCAGCGGTTCCTCGACTTCGTCGGCGTGAACTCGCCGGTCAGCGAGCTCTACTCCGACGCCGACAGCAACATCACGGCCGTCCCGGTGGCCTGGTTCAACGCCGCCGTCGTCGCGCTGATGAACGCGACAGTGGACACGGCCGTGGCCGCCGGCAGCGGCAGCAACAACACCAAGAAGTACTTCGCCACGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB653234             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGAAGCACTACCCGAAGATTTACGGGATGGCGCAGTGCGCGCCGGTGATGACGGCGGCGCAGTGCCGGAGCTGCCTCGGCGGCTTCGTCTCGTCGATCCCATGGTTCTTGAACGGGAAGCCCGGAGGGAGAGTTCTTGGGATTTGGTGCAACCTGAGGTACAGCGTGAAGCCGTTCTATCAGGGCCAGCCAATGCTGCAGATTTCTGCGCCGCCGGAGCCACCGCCGCCGGCCATGCCTTCACTTGCTGCTCCGCCGACTAGAACAGCGAGGAGAAGGAGAGTTGCAGGGATCTCTGCAGGCGTCGCTTGCTTCGTTGTCTTGATGTTGATACTGTCAGCTTATGCTTTCATTCGTTTCAAGAGAAAGAAGGCTGCAAAGAAAGACAACTTATTGAAGAAAATGGCAAGAGGAAAATGCACGATCTTTGATTTGGCTACACTGAAAGAGGCAACTGAGAACTTCTCAGAGAAGCATAAGCTTGGAGAAGGCGGATTTGGTACTGTATATAAGGGAAAATTACCAGACGGCCAAGAAATAGCAGTAAAGAAGCTCATAGAAAGTTGTGGGCATGGACTGAATCAGCTACACAATGAAGTGCTGGTGTTGGCAGAGCTTCAGCACAAGAACCTTGTTAGGCTACAGGGGTTTTGCGTCCATAAGGATGAGATGTTGCTTGTTTATGAATACATAAAAAATGGGAGCCTCGACAAC]


>consensus_7128#0 GTCAAACCAATGGAAAGAGGAATTGTACGTTGCATTCTGCCGGCCGCGGCAATGCTCGCA GTTGTAGTCGTCGTCGTTGCCGTGCTGCTGCCGCTCGCCGCGGCGCAGCAGACCATGCAG TTCTCGTCATGCGCCAGCGGCGCCTACGCGGCGAACAGCACGTACGAGGCGAACCTCGCC GTCCTCGCGGCGGCGCTCCCGGGCAACGCGTCCACCGCGGCGGCGGCCGGCTACGCCACG GCCACCGTCGGCGCGGTGCCCGACCAGGTGTCCGCGCTGGCGCTGTGCCGCGGCGACGCG AACGCCACGGCGTGCCGCGCGTGCGTCGCGGCGTCGTTCCGCGTCGCGCGGCGGGACTGC CCCAGCAGCAAGGACGCCACCACCTACCAGGACGGCTGCATCGTCCGCTTCTCCGACCAG CGGTTCCTCGACTTCGTCGGCGTGAACTCGCCGGTCAGCGAGCTCTACTCCGACGCCGAC AGCAACATCACGGCCGTCCCGGTGGCCTGGTTCAACGCCGCCGTCGTCGCGCTGATGAAC GCGACGGTGGACACGGCCGTGGCCGCCGGCAGCGGCAGCAACAACACCAAGAAGTACTTC GCCACGGCGGTGGAGGACTTCGACCCGAAGCACTACCCGAAGATTTACGGGATGGCGCAG TGCGCGCCGGTGATGACGGCGGCGCAGTGCCGGAGCTGCCTCGGCGGCTTCGTCTCGTCG ATCCCATGGTTCTTGAACGGGAAGCCCGGAGGGAGAGTTCTTGGGATTTGGTGCAACCTG AGGTACAGCGTGAAGCCGTTCTATCAGGGCCAGCCAATGCTGCAGATTTCTGCGCCGCCG GAGCCACCGCCGCCGGCCATGCCTTCACTTGCTGCTCCGCCGACTAGAACAGCGAGGAGA AGGAGAGTTGCAGGGATCTCTGCAGGCGTCGCTTGCTTCGTTGTCTTGATGTTGATACTG TCAGCTTATGCTTTCATTCGTTTCAAGAGAAAGAAGGCTGCAAAGAAAGACAACTTATTG AAGAAAATGGCAAGAGGAAAATGCACGATCTTTGATTTGGCTACACTGAAAGAGGCAACT GAGAACTTCTCAGAGAAGCATAAGCTTGGAGAAGGCGGATTTGGTACTGTATATAAGGGA AAATTACCAGACGGCCAAGAAATAGCAGTAAAGAAGCTCATAGAAAGTTGTGGGCATGGA CTGAATCAGCTACACAATGAAGTGCTGGTGTTGGCAGAGCTTCAGCACAAGAACCTTGTT AGGCTACAGGGGTTTTGCGTCCATAAGGATGAGATGTTGCTTGTTTATGAATACATAAAA AATGGGAGCCTCGACAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)