These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7147#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2628 fasta sequence [TGTGCAGCCGCCGATCTCCTTCCAAAATCCGGTCTCCTCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGGAATCCTCTCAATCTCCTCTTCCTTTTCCCCAATAAATCCCCAAAAGTTTCTATGGAAATCCTTTCTAATTTCGCGGATCAATCTTTCCTTTTCCCGGGCGAGGATCCTAAACTTTCCCGGAGTTTTTCCCGTCGATTTGGGCCCGGACCCGAGCTCGCGTGCCTATATAAAGGACCCGCTAGTCGTCCTCTGCCTATCCCCTCAAGTCCCGTCCTTCGCCGAGCCCTAGCCGCCCCTGCCCGCGAGCTCCCTCTCTCTCCACCTCCGGCCGCCGCTCCAGCCGCCGTGCGCCGTCGCCTCGGCCGTCGCCGGTCAGCGCCGACACCTCCCTCGGCTACACAAAGTCGAGCTCTACCCCGGCCTCTGGTTGTTTTGCGCCAAATCCCACCGGAGGTTGCCCGTCGACGTGAAGTGGAGCACCGCCGTCGCCGCCGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCGTCGTCTCCACTGGATTCGCAGCTGCGAGGAGAACACCGTCCACCACCTCTTCTTCGCCAAAGATCGCCGGAACACCGTCGCCATCGTTGACCAGTACCACGTCGCCCTTCGGAGCTCATCGCTGGCCATCTCCTTCGCGGTCCGTCGTCGCGTAAGTGTTGAGTAGCATGTTGAAACCTGGAGAAGAAACTGTGATGAATGAAGTGGTCGACAAGATATTTCGGGCAATGCAGCAACTTCAGAGAGGTCAGTGTTGTTTTGTCACGTCAGCTTGCCGGACGTGGGAAATTTAACTATTTGCCACTCTTGTGACATGGCAATTAACGATTTGCCACGCTCTGTCAATGACACGTGGGCCCTCATGTGTCTATGACATGTGGGCCTAGTGGCAAATCGTTAAGGACCATTCGTAAGAGTGGCAAATAGTTAAAAGCCCCGCCGGACGTAGCTGAAAGATTCAGATTTTGAAAATAAGTTTTGGAGGGTTTATTTTTAAAATTAAATTTTAAAAAGATTAAAAAAATCATGTTTATCAGCTTTTTGCGGTGGTACTGATAACTAGCTGATGGACACTAGCGACATTGTTTTATAATATCCAAATAAAATGAAGAGAGAAACAGTCGCAAAAATACGATATTGCCCTTGCATGCCAAGTCCAGCTCGCATACAGCTCCGACACCACCACCACACCCGCCGCCGCACCCATTGTCACCGTCACCAATGAGGTGGCTCTTCCGGGGGGTTTGAGGGTGGCCCACGCCGCCACGCGCCTGGGCTCGTGGCTCCGTGTCATTCCCGCACTCGTCGCTGCTACAGCTCGAGGACCGCGCCGATGCTCCACCATACGCCACGCTTGCAAGCGAGCACAACGTCGACCACCTCTTGGTTCATGTCAAGCAGGGTGTCAAAGAGCGCAGGCGGTCATAGTCGGTCTGGCCATGGCGCCGCTGTCGCCAGCGAGGTGGCTCTCTGGGGATTCAAGGGGGCCCGCTTGCCTAGGCCCGTGGCTGCCCCATTACATAGGCCCGTGGCTCCATATCGTTTCAGCACTTGTCGTTGCTACAGCATGAGGGCCACGCTGGCGCCGGAAATGTCGTCGCCTCCATGTCGTCGGAGCTATATGCGAGCCGCACATGACATGCAAGGGTAAAATCGTACTTTCACGGCTATTTCTCTCTATTTCCAACAGCTAATTACCAGTTTTTTGCTGTGGGACAGATACATGGTCTTGCACTGTCTCCTAACTAATTACTTTGCTTTTTCGATGTCCTGTAGGAAATTTTGCCATGGTAAAAGTCCATAATCTGATAGAAAAGTGCCCGCATATCTTAACTAATAAAAAAATTGCTATCCTTCCTATCGTCAACAATTTTTCGTCCGTATGTGCGTTTTTTTTCACTTTCCACCTTTTTTTAGCGCTGCTTTTTTAATCATCCAATCGGACAGAAACACAGATCGAGAACCCTAGAAAAAAGGGGCAAAAGAGAGGAAAAAATCACACAAATGGGCAAGCTTAGAGTCGCCAGATACGGTTGTTCCGAGCTCATTGCCATCGTCGTCCACTGCGCTCGTGTCGTGCCCGAACCAGCCGGGCACGACCACACTTGCCACCTCCCCAACCGCGCTGGCACCCCTTTCCTCTACCACGACGCCCCATCCTCTGGCGCTCTCCTCTTGCTTTAAGGCAGAGGAGAAGAAAGAAGGACGGCCGTCGCCACTGTCTCCGTGCCTAGCCCTGTCATCGAGGTTGATGGGGAGACGGGAAGGGTAAGAGTCGTCATCGTCGCTGTACCTCCGCCATCGCTGCACCACAAGATGGGAGGGACAGGGGGAGATGGAGTGGCGCCGCCGGTGGGGGGAGGGGGGAGGGGGAGGGGGAGCGGCATCGTCGATGGGTGAGGGGGAAGGGGAGCGGTGCCGCCGGTGGGGAGAGGCGCTACCAGTGAGGTAGGGAGAGAAGGAGCGACGGAGGGGGATAGGTGCCGCCGACGCCATCATTTTCAGAGAGAGAGAAGGGGAGGGGAAATAATTTTATAAGATCATAAGGCGGTTTGGATGGTGGTTTTGCCTAACGTGGCGCCTACGTGGCG] [+] EMBL AK120192 [TGTGCAGCCGCCGATCTCCTTCCAAAATCCGGTCTCCTCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGGAATCCTCTCAATCTCCTCTTCCTTTTCCCCAATAAATCCCCAAAAGTTTCTATGGAAATCCTTTCTAATTTCGCGGATCAATCTTTCCTTTTCCCGGGCGAGGATCCTAAACTTTCCCGGAGTTTTTCCCGTCGATTTGGGCCCGGACCCGAGCTCGCGTGCCTATATAAAGGACCCGCTAGTCGTCCTCTGCCTATCCCCTCAAGTCCCGTCCTTCGCCGAGCCCTAGCCGCCCCTGCCCGCGAGCTCCCTCTCTCTCCACCTCCGGCCGCCGCTCCAGCCGCCGTGCGCCGTCGCCTCGGCCGTCGCCGGTCAGCGCCGACACCTCCCTCGGCTACACAAAGTCGAGCTCTACCCCGGCCTCTGGTTGTTTTGCGCCAAATCCCACCGGAGGTTGCCCGTCGACGTGAAGTGGAGCACCGCCGTCGCCGCCGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCGTCGTCTCCACTGGATTCGCAGCTGCGAGGAGAACACCGTCCACCACCTCTTCTTCGCCAAAGATCGCCGGAACACCGTCGCCATCGTTGACCAGTACCACGTCGCCCTTCGGAGCTCATCGCTGGCCATCTCCTTCGCGGTCCGTCGTCGCGTAAGTGTTGAGTAGCATGTTGAAACCTGGAGAAGAAACTGTGATGAATGAAGTGGTCGACAAGATATTTCGGGCAATGCAGCAACTTCAGAGAGGTCAGTGTTGTTTTGTCACGTCAGCTTGCCGGACGTGGGAAATTTAACTATTTGCCACTCTTGTGACATGGCAATTAACGATTTGCCACGCTCTGTCAATGACACGTGGGCCCTCATGTGTCTATGACATGTGGGCCTAGTGGCAAATCGTTAAGGACCATTCGTAAGAGTGGCAAATAGTTAAAAGCCCCGCCGGACGTAGCTGAAAGATTCAGATTTTGAAAATAAGTTTTGGAGGGTTTATTTTTAAAATTAAATTTTAAAAAGATTAAAAAAATCATGTTTATCAGCTTTTTGCGGTGGTACTGATAACTAGCTGATGGACACTAGCGACATTGTTTTATAATATCCAAATAAAATGAAGAGAGAAACAGTCGCAAAAATACGATATTGCCCTTGCATGCCAAGTCCAGCTCGCATACAGCTCCGACACCACCACCACACCCGCCGCCGCACCCATTGTCACCGTCACCAATGAGGTGGCTCTTCCGGGGGGTTTGAGGGTGGCCCACGCCGCCACGCGCCTGGGCTCGTGGCTCCGTGTCATTCCCGCACTCGTCGCTGCTACAGCTCGAGGACCGCGCCGATGCTCCACCATACGCCACGCTTGCAAGCGAGCACAACGTCGACCACCTCTTGGTTCATGTCAAGCAGGGTGTCAAAGAGCGCAGGCGGTCATAGTCGGTCTGGCCATGGCGCCGCTGTCGCCAGCGAGGTGGCTCTCTGGGGATTCAAGGGGGCCCGCTTGCCTAGGCCCGTGGCTGCCCCATTACATAGGCCCGTGGCTCCATATCGTTTCAGCACTTGTCGTTGCTACAGCATGAGGGCCACGCTGGCGCCGGAAATGTCGTCGCCTCCATGTCGTCGGAGCTATATGCGAGCCGCACATGACATGCAAGGGTAAAATCGTACTTTCACGGCTATTTCTCTCTATTTCCAACAGCTAATTACCAGTTTTTTGCTGTGGGACAGATACATGGTCTTGCACTGTCTCCTAACTAATTACTTTGCTTTTTCGATGTCCTGTAGGAAATTTTGCCATGGTAAAAGTCCATAATCTGATAGAAAAGTGCCCGCATATCTTAACTAATAAAAAAATTGCTATCCTTCCTATCGTCAACAATTTTTCGTCCGTATGTGCGTTTTTTTTCACTTTCCACCTTTTTTTAGCGCTGCTTTTTTAATCATCCAATCGGACAGAAACACAGATCGAGAACCCTAGAAAAAAGGGGCAAAAGAGAGGAAAAAATCACACAAATGGGCAAGCTTAGAGTCGCCAGATACGGTTGTTCCGAGCTCATTGCCATCGTCGTCCACTGCGCTCGTGTCGTGCCCGAACCAGCCGGGCACGACCACACTTGCCACCTCCCCAACCGCGCTGGCACCCCTTTCCTCTACCACGACGCCCCATCCTCTGGCGCTCTCCTCTTGCTTTAAGGCAGAGGAGAAGAAAGAAGGACGGCCGTCGCCACTGTCTCCGTGCCTAGCCCTGTCATCGAGGTTGATGGGGAGACGGGAAGGGTAAGAGTCGTCATCGTCGCTGTACCTCCGCCATCGCTGCACCACAAGATGGGAGGGACAGGGGGAGATGGAGTGGCGCCGCCGGTGGGGGGAGGGGGGAGGGGGAGGGGGAGCGGCATCGTCGATGGGTGAGGGGGAAGGGGAGCGGTGCCGCCGGTGGGGAGAGGCGCTACCAGTGAGGTAGGGAGAGAAGGAGCGACGGAGGGGGATAGGTGCCGCCGACGCCATCATTTTCAGAGAGAGAGAAGGGGAGGGGAAATAATTTTATAAGATCATAAGGCGGTTTGGATGGTGGTTTTGCCTAACGTGGCGCCTACGTGGCG] consensusID : consensus_7147#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2153 fasta sequence [CTTCTTCTACCTCTGGACAGAGCCGAGCTCTCCAGCCCGTGCACAGTTGCCGCCGCCTCCTCCTTCCAAATCTGGCCTCCCCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGGAATCCTATCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAAAGTTTCTATAGGAAATCCTTTCCAATTTCGCGGATCAATATTTCCTTTTGCCGGCAAGGATCCTAAACTTTCCCGGAGTTTCTTCCGTCGATTTGGGCCCGGACCCGAGCTCCCGTGCCTATATAAAGCATCCCCTCGTCGTCCTCTACCTAACCCCTCAAGTCCCGTCTTCCGCCGTCGCCGGAATCGCTCTCCCCGGGCTCTCCTTCTCTCTCCAAGCGCCGGCGCCGCTCCAGCCGCATCTCGCCGTCGCCTCGGCCGTCGCCGGTAGCGCCGCCACCTCCCTCGGCTCCGAAAAGTCGATCTCTACCCCGGCCGCTTGTTATTTTGCGCCAAATCCCACCGGAGGTAGCCCGTCGTCGTGAACCGGAGCGCCGCCGTCGTCGCTGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCGTCGTCGCCTTCGGTCGCCGTCGTCTTCATTGGATTCGCAGCTGCAAGCAGAAGACCGTCCACCACCTCTTCTTCGCCAAATATTACCGGAACGCCGTCGCCGTCTTTGACCAGTACCTCGCCGCCTTTCCAAGCTCACTGCCGGCCGTCTGCTGTCTCATCCATCGTCGCGCCACCCCTCGCGTCGTCATCGTCTCTGTGTGGTGTCGTCGGACCATCGCTGGCTTCTTCTCCGGTCGCCGCCGTTTCCTGCTTGTCGTTTCCGTTGTTTCGAAGGTTCGTGAGTGCGTTGTAAGTATCCAAGAAGATTAATTGAAGACCCTTTATTGCAAGTTGAAGAAAAGTTGCAAAGGAGAAGACGTTTGGGTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGGATCTTCGCTAGACCTTTGTGTACCTCGGTTGATTCCTGGACGAGGATTTTAATACACAAATTAGTTCGGAAATTACTAGTGAATTTCTGGGCGTGACATGTGTACCAGCTTTGCAACCGGGTGATAAGGCAGTTCGGGAGGCGGCAAACAATCCCGCAAAGATTCTCTACAAGCATCGATCTCCATAAGGTGGACAGAAGGAAAAACAAGAAGACCACCGATTGGACTGCTTATCATCAGACACACATCGATCGATGGGACCAGTTCAAAGCCAACCGCATGCCGGATAACGCAATGCACAATAGGCAAGAGTTCAACGCATACTTAGCCTGGCTCGCGAGGAACTACCGCCTCGCCCTACGTCCGGCTTGGACGCTAGCCGATATAGCGGACAACCTGACTGAGGTGGAGGAGTAGAACGAGTACGATACAAGTACTCGTAGAGGTAGCACGGTCGAGACGGGTCCGGTTCGAGATAGAGTGGCACAAGAGCTAGTCAGGGCAGTGAATGATTTGGGCGTGGCACTTGGCACGCCCCCTAGCTCGCAACAAGAGAGCAGTGTTCTTCAGAATGCCTTACAGACTCTACGACAGCGTTGCAAGAAGTTGGCGGCACGGCTGGGATGCAGGGCCGACGATGCCGTCGAACCACCTCGACGGGCCGAGCAGGGGACAAGTCGAGGAGTGGCTCAAGAGGGTGAACAAGAGGGAGAGGAGGAGGAAGAGGGAGAGGAGGAGGAGGAGGAGGAAGAAGGAGAGGAGGAGGAGGAGGGAGAGGAGGAGGAAGAGGAGGAGCAAGTGGAGCTCGGTCCCTCCTAGCTACAGGATGCTCCACAGTCATCATAGGGGCCATCTCGACCACAGCGCAAGAGAGCTCCTATTTCCGACTGGAGGTACACTCCCAATCAGCCTCGTGCTCCAAGGGGTAGGAAGAAGTAAGTTTTTTTTGGTGGTTTAGTTCGGTAACTTGTGTACTTTATGAAACTCACAACTATACTATGACTTGCAATCCTATATTTTGATGAACCCACAACTATGGTTGTGTTTAGGCTTAAGTCTGTGGATGGATGTGGTTGTGATGGAGCTGGATGTGTATGGATTTTGGATGGATGAATGGTTATGTTTATGGATAGATGGAAGTATATGTCTGTGAATGGATGGATGTATTT] [+] EMBL AK064275 [CTTCTTCTACCTCTGGACAGAGCCGAGCTCTCCAGCCCGTGCACAGTTGCCGCCGCCTCCTCCTTCCAAATCTGGCCTCCCCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGGAATCCTATCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAAAGTTTCTATAGGAAATCCTTTCCAATTTCGCGGATCAATATTTCCTTTTGCCGGCAAGGATCCTAAACTTTCCCGGAGTTTCTTCCGTCGATTTGGGCCCGGACCCGAGCTCCCGTGCCTATATAAAGCATCCCCTCGTCGTCCTCTACCTAACCCCTCAAGTCCCGTCTTCCGCCGTCGCCGGAATCGCTCTCCCCGGGCTCTCCTTCTCTCTCCAAGCGCCGGCGCCGCTCCAGCCGCATCTCGCCGTCGCCTCGGCCGTCGCCGGTAGCGCCGCCACCTCCCTCGGCTCCGAAAAGTCGATCTCTACCCCGGCCGCTTGTTATTTTGCGCCAAATCCCACCGGAGGTAGCCCGTCGTCGTGAACCGGAGCGCCGCCGTCGTCGCTGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCGTCGTCGCCTTCGGTCGCCGTCGTCTTCATTGGATTCGCAGCTGCAAGCAGAAGACCGTCCACCACCTCTTCTTCGCCAAATATTACCGGAACGCCGTCGCCGTCTTTGACCAGTACCTCGCCGCCTTTCCAAGCTCACTGCCGGCCGTCTGCTGTCTCATCCATCGTCGCGCCACCCCTCGCGTCGTCATCGTCTCTGTGTGGTGTCGTCGGACCATCGCTGGCTTCTTCTCCGGTCGCCGCCGTTTCCTGCTTGTCGTTTCCGTTGTTTCGAAGGTTCGTGAGTGCGTTGTAAGTATCCAAGAAGATTAATTGAAGACCCTTTATTGCAAGTTGAAGAAAAGTTGCAAAGGAGAAGACGTTTGGGTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGGATCTTCGCTAGACCTTTGTGTACCTCGGTTGATTCCTGGACGAGGATTTTAATACACAAATTAGTTCGGAAATTACTAGTGAATTTCTGGGCGTGACATGTGTACCAGCTTTGCAACCGGGTGATAAGGCAGTTCGGGAGGCGGCAAACAATCCCGCAAAGATTCTCTACAAGCATCGATCTCCATAAGGTGGACAGAAGGAAAAACAAGAAGACCACCGATTGGACTGCTTATCATCAGACACACATCGATCGATGGGACCAGTTCAAAGCCAACCGCATGCCGGATAACGCAATGCACAATAGGCAAGAGTTCAACGCATACTTAGCCTGGCTCGCGAGGAACTACCGCCTCGCCCTACGTCCGGCTTGGACGCTAGCCGATATAGCGGACAACCTGACTGAGGTGGAGGAGTAGAACGAGTACGATACAAGTACTCGTAGAGGTAGCACGGTCGAGACGGGTCCGGTTCGAGATAGAGTGGCACAAGAGCTAGTCAGGGCAGTGAATGATTTGGGCGTGGCACTTGGCACGCCCCCTAGCTCGCAACAAGAGAGCAGTGTTCTTCAGAATGCCTTACAGACTCTACGACAGCGTTGCAAGAAGTTGGCGGCACGGCTGGGATGCAGGGCCGACGATGCCGTCGAACCACCTCGACGGGCCGAGCAGGGGACAAGTCGAGGAGTGGCTCAAGAGGGTGAACAAGAGGGAGAGGAGGAGGAAGAGGGAGAGGAGGAGGAGGAGGAGGAAGAAGGAGAGGAGGAGGAGGAGGGAGAGGAGGAGGAAGAGGAGGAGCAAGTGGAGCTCGGTCCCTCCTAGCTACAGGATGCTCCACAGTCATCATAGGGGCCATCTCGACCACAGCGCAAGAGAGCTCCTATTTCCGACTGGAGGTACACTCCCAATCAGCCTCGTGCTCCAAGGGGTAGGAAGAAGTAAGTTTTTTTTGGTGGTTTAGTTCGGTAACTTGTGTACTTTATGAAACTCACAACTATACTATGACTTGCAATCCTATATTTTGATGAACCCACAACTATGGTTGTGTTTAGGCTTAAGTCTGTGGATGGATGTGGTTGTGATGGAGCTGGATGTGTATGGATTTTGGATGGATGAATGGTTATGTTTATGGATAGATGGAAGTATATGTCTGTGAATGGATGGATGTATTT] consensusID : consensus_7147#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 587 fasta sequence [CAGATCATGAGCATAACCATCCAAACATCAAAAATCCATACACATCCAGTTCCATCACAACCACATCCATCCACAGACTTAAGCCTAAACACAACCATAGTTGTGGGTTCATCAAAATATAAGATTTCAAGTCGCAATATAGTTGTGGGTTTCATAAAGTACACAAGTTACCGAACTAAACCCAACCAAATAAAACTTACTTCTTCCTACCCCTTGGAGCGCAAGGCTGATCGGGAATGTACCTCCAGTCGGAAACAGGAGCTCTCTTGCGCTGTGGTCGAGATGGCCCCTGTGATGACTGTGGAGCGTCCTGCAGCTGGGAGGGACCGAGCTCCACTTGCTCTTCCTCCTCCTCTCCCTCCTCCTCTCCCTCTTCCTCTCCCTCTTCCTCTTGTTCACCCTCTTGAGCCACTCCTCGACTTGTCCCCTGCTCGGCCCGTCGAGGTGGTTCGACGGCATCGTCGGCCCTGCATCCCAGCCGTGCCGCCAACTTCCTGCAACGCTGTCGTAGAGTCTAGTACCAACAGAAGGAAGGAGTTAGTTCCAATTATGTGTATGGTGCATGAATTTACAAATCTACCTATAGG] [+] EMBL OSA550208 [CAGATCATGAGCATAACCATCCAAACATCAAAAATCCATACACATCCAGTTCCATCACAACCACATCCATCCACAGACTTAAGCCTAAACACAACCATAGTTGTGGGTTCATCAAAATATAAGATTTCAAGTCGCAATATAGTTGTGGGTTTCATAAAGTACACAAGTTACCGAACTAAACCCAACCAAATAAAACTTACTTCTTCCTACCCCTTGGAGCGCAAGGCTGATCGGGAATGTACCTCCAGTCGGAAACAGGAGCTCTCTTGCGCTGTGGTCGAGATGGCCCCTGTGATGACTGTGGAGCGTCCTGCAGCTGGGAGGGACCGAGCTCCACTTGCTCTTCCTCCTCCTCTCCCTCCTCCTCTCCCTCTTCCTCTCCCTCTTCCTCTTGTTCACCCTCTTGAGCCACTCCTCGACTTGTCCCCTGCTCGGCCCGTCGAGGTGGTTCGACGGCATCGTCGGCCCTGCATCCCAGCCGTGCCGCCAACTTCCTGCAACGCTGTCGTAGAGTCTAGTACCAACAGAAGGAAGGAGTTAGTTCCAATTATGTGTATGGTGCATGAATTTACAAATCTACCTATAGG] consensusID : consensus_7147#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 226 fasta sequence [CCAGCCGACTGTCTCCCGTGCCGTGCACAGTGCCGCCGATTCCCTTCCAAAATCCGGCCACCTCGTTGCTCCTTTTTCAAAATTAGTTGCGGGAATGGAATCCACTCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAATGTTTCTATGGAAATCCTTTCCAATTTCGCGGTTCAACCTTTCCTTTTTCCGGCGAAGATCTAAACTTTCCCGAGTTTTTCCCG] [+] EMBL C28535 [CCAGCCGACTGTCTCCCGTGCCGTGCACAGTGCCGCCGATTCCCTTCCAAAATCCGGCCACCTCGTTGCTCCTTTTTCAAAATTAGTTGCGGGAATGGAATCCACTCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAATGTTTCTATGGAAATCCTTTCCAATTTCGCGGTTCAACCTTTCCTTTTTCCGGCGAAGATCTAAACTTTCCCGAGTTTTTCCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7147#1 CTTCTTCTACCTCTGGACAGAGCCGA--GCTCTCCAGCCCGTGCACAGTTGCCGCCGCCT 58 consensus_7147#3 ------------------CCAGCCGACTGTCTCCCGTGCCGTGCACAGT-GCCGCCGATT 41 consensus_7147#0 -----------------------------------------TGTGCA---GCCGCCGATC 16 consensus_7147#2 --------------CAGATCATGAGCATAACCATCCAAACATCAAAAATCCATACACATC 46 * * * consensus_7147#1 CCTCCTT--CCAAATCTGGCCTCCCCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGG 116 consensus_7147#3 CC-CTTC--CAAAATCCGGCCACCTCGTTGCTCCTTTTTCAAAATTAGTTGCGGGAATGG 98 consensus_7147#0 TC-CTTC--CAAAATCCGGTCTCCTCGTTGCTCCTCTTTCCAAATTAGTTGCGGGAATGG 73 consensus_7147#2 CAGTTCCATCACAACCACATCCATCCACAGACTTAAGCCTAAACACAACCATAGTTGTGG 106 * ** * * * * ** * * *** consensus_7147#1 AATCCTATCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAAAGTTTCTATA---GGA 173 consensus_7147#3 AATCCACTCAATCTCCTCTTCCTTTTCCCCAAGAAATCCCCAAATGTTTCTAT----GGA 154 consensus_7147#0 AATCCTCTCAATCTCCTCTTCCTTTTCCCCAATAAATCCCCAAAAGTTTCTAT----GGA 129 consensus_7147#2 GTTCATCAAAATATAAGATTTCAAGTCGC-AATATAGTTGTGGGTTTCATAAAGTACACA 165 ** *** * ** * ** * ** * * * * * consensus_7147#1 AAT--CCTTTCCAATTTCG--CGGATCAATATTTCCTTTTGCCGG--CAAGGATCCTAAA 227 consensus_7147#3 AAT--CCTTTCCAATTTCG--CGGTTCAACCTTTCCTTTTTCCGG--CGAAGATC-TAAA 207 consensus_7147#0 AAT--CCTTTCTAATTTCG--CGGATCAATCTTTCCTTTTCCCGGG-CGAGGATCCTAAA 184 consensus_7147#2 AGTTACCGAACTAAACCCAACCAAATAAAACTTACTTCTTCCTACCCCTTGGAGCGCAAG 225 * * ** * ** * * * ** ** * * ** * * ** * ** consensus_7147#1 CTTTCCCGGAGTTTCTTCCGTCGATTTGGGCCCGGACCCGAGCTCCCGTGCCTATATAAA 287 consensus_7147#3 CTTTCCCG-AGTTTTTCCCG---------------------------------------- 226 consensus_7147#0 CTTTCCCGGAGTTTTTCCCGTCGATTTGGGCCCGGACCCGAGCTCGCGTGCCTATATAAA 244 consensus_7147#2 GCTGATCGGGAATGTACC--TCCAGTCGGAAACAGGAGCTCTCTTGCGCTGTGGTCGAGA 283 * ** * * consensus_7147#1 GCATCCCCTCGTCGTCCTCTACCTAACCCCTC------AAGTCCCGTCTTCCGCCGTCGC 341 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 GGACCCGCTAGTCGTCCTCTGCCTATCCCCTC------AAGTCCCGTCCTTCGCCGAGCC 298 consensus_7147#2 TGGCCCCTGTGATGACTGTGGAGCGTCCTGCAGCTGGGAGGGACCGAGCTCCACTTGCTC 343 consensus_7147#1 CGGAATCGCTCTCCCCGGGCTCTCCTTCTCTCTCCAAGCGCCGGCGCCGCTCCAGCCGCA 401 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CTAGCCGCCCCTGCCCGCGAGCTCCCTCTCTCTCCACCTCCGGCCGCCGCTCCAGCCGCC 358 consensus_7147#2 TTCCTCCTCCTCTCCCTCCTCCTCTCCCTCTTCCTCTCCCTCTTCCTCTTGTTCACCCTC 403 consensus_7147#1 TCTCGCCGTCGCCTCGGCCGTCGCCGGT-AGCGCCGCCACCTCCCTCGGCTCCGAAAAGT 460 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 GTGCGCCGTCGCCTCGGCCGTCGCCGGTCAGCGCCGACACCTCCCTCGGCTACACAAAGT 418 consensus_7147#2 TTGAGCCACTCCTCGACTTGTCCCCTGCTCGGCCCGTCGAGGTGGTTCGACGGCATCGTC 463 consensus_7147#1 CGATCTCTACCCCGGCCGCTTGTTATTTTGCGCCAAATCCCACCGGAGGTAGCCCGTCGT 520 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CGAGCTCTACCCCGGCCTCTGGTTGTTTTGCGCCAAATCCCACCGGAGGTTGCCCGTCGA 478 consensus_7147#2 GGCCCTGCATCCCAGCCGTGCCGCCAACTTCCTGCAACGCTGTCGTAGAGTCTAGTACCA 523 consensus_7147#1 CGTGAACCGGAGCGCCGCCGTCGTCGCTGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCG 580 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CGTGAAGTGGAGCACCGCCGTCGCCGCCGTGCCTCCAGCCGCGCCGTTCGTCGTCGTCCG 538 consensus_7147#2 ACAGAAGGAAGGAGTTAGTTCCAATTATGTGTATGGTGCATGAATTTACAAATCTACCTA 583 consensus_7147#1 TCGTCGCCTTCGGTCGCCGTCGTCTTCATTGGATTCGCAGCTGCAAGCAGAAGACCGTCC 640 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TCGT-------------------CTCCACTGGATTCGCAGCTGCGAGGAGAACACCGTCC 579 consensus_7147#2 TAGG-------------------------------------------------------- 587 consensus_7147#1 ACCACCTCTTCTTCGCCAAATATTACCGGAACGCCGTCGCCGTCTTTGACCAGTACCTCG 700 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 ACCACCTCTTCTTCGCCAAAGATCGCCGGAACACCGTCGCCATCGTTGACCAGTACCACG 639 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 CCGCCTTTCCAAGCTCACTGCCGGCCGTCTGCTGTCTCATCCATCGTCGCGCCACCCCTC 760 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TCGCCCTTCGGAGCTCATCGCTGGCCATCTCCTTCGCGGTCCGTCGTCGCGTAAGTGTTG 699 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 -GCGTCGTCATCGTCTCTGTGTGGTGTCGTCGGACCATCGCTGGCTTC-------TTCTC 812 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 AGTAGCATGTTGAAACCTGGAGAAGAAACTGTGATGAATGAAGTGGTCGACAAGATATTT 759 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 CGGTCGCCGCCGTTTCCTGCTTGTCGTTTCCGTTGTTTCGAAGGTTCGTGAGTGCGTTGT 872 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CGGGCAATGCAGCAACTTCAGAGAGGTCAGTGTTGTTTTGTCA---CGTCAGCTTGCCGG 816 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 AAGTATCCAAGAAGATTAATTGAAGACCCTTTATTGCA--AGTTGAAGAAAAGTTGCAAA 930 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 ACGTGGGAAATTTAACTATTTGCCACTCTTGTGACATGGCAATTAACGATTTGCCACGCT 876 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 --GGAGAAGACGTTTGGGTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGGATCT 988 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CTGTCAATGACACGTGGGCCCTCATGTGTCTATG--ACATGTGGGCCTAGTGGCAAATCG 934 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 TCGCTAGACCTTTGT-------GTACCTCGGTTGATTCCTGGACGAGGAT---TTTAATA 1038 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TTAAGGACCATTCGTAAGAGTGGCAAATAGTTAAAAGCCCCGCCGGACGTAGCTGAAAGA 994 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 CACAAATTAGTTCGGAAATTACTAGTGAATTT---CTGGGCGTGACATGTGTACCAGCTT 1095 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TTCAGATTTTGAAAATAAGTTTTGGAGGGTTTATTTTTAAAATTAAATTTTAAAAAGATT 1054 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 TGCAACCGGGTGATAAGGCAGTTCGGGAGGCGGCAAACA-ATCCCGCAAAGATTCTCTAC 1154 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 AAAAAAATCATGTTTATCAGCTTTTTGCGGTGGTACTGATAACTAGCTGATGGACACTAG 1114 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 AAGCATCG---------ATCTCCATAAGGTGGACAGAAGGAAAAACAAGAAGACCACCGA 1205 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CGACATTGTTTTATAATATCCAAATAAAATGAAGAGAGAAACAGTCGCAAAAATACGATA 1174 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 TTGGACT-GCTTATCA--TCAGACACACATCGATCGATGGGACCAGTTCAAAGCCAACCG 1262 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TTGCCCTTGCATGCCAAGTCCAGCTCGCATACAGCTCCGACACCACCACCACACCCGCCG 1234 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 C-ATGCCGGATAACGCAATGCACAAT-AGGCAAGAGTTCAACGCATACTTAGCCTGGCTC 1320 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CCGCACCCATTGTCACCGTCACCAATGAGGTGGCTCTTCCGGGGGGTTTGAGGGTGGCCC 1294 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 GCGAGGAACTACCGCCTCGCCCTACGTCCGGCTTGGACGCTAGCCGATATAGCGG--ACA 1378 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 ACGCCGCCACGC-GCCTGGGCTCGTGGCTCCGTGTCATTCCCGCACTCGTCGCTGCTACA 1353 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ACCTGACTGAGGTGGAGGAGTAGAACGAGTACGATACAAGTACTCGTAGAGGTAGCA-CG 1437 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 GCTCGAGGACCGCGCCGATGCTCCACCA-TACGCCACGCTTGCAAGCGAGCACAACGTCG 1412 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 GTCGAGACGGGTCCGGTTCGAGATAGAGTGGCACAAGAGCTAGTCAGGGCAGTGAATGAT 1497 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 ACCACCTCTTGGTTCATGTCAAGCAGGGTGTCAAAGAGCGCAGGC--GGTCATAGTCGGT 1470 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 TTGGGCGTGGCACTTGGCACGCCCCCTAGCTCGCAACAAGAGAGCAGTGTTCTTCAGAAT 1557 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CTGGCCATGGCGCCGCTGTCGCCAGCGAGGTGGCTCTCTGGGGATTCAAGGGGGCCCGCT 1530 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 GCCTTACAGACTCTACGACAGCGTTGCAAGAAGTTGGCGGCACGGCTGGGATGCAGGGCC 1617 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TGCCTAGGCCCGTGGCTGCCCCATTACAT-AGGCCCGTGGCTCCATATCGTTTCAGCACT 1589 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 GACGATGCCGTCGAACCACCTCGACGGGCCGAGCAGGGGACAAGTCGAGGA----GTGGC 1673 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 --TGTCGTTGCTACAGCATGAGGGCCACGCTGGCGCCGGAAATGTCGTCGCCTCCATGTC 1647 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 TCAAGAGG-GTGAACAAGAGGGAGAGGAGGAGGAAGAGGGAGAGGAGGAGGAGGAGGAGG 1732 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 GTCGGAGCTATATGCGAGCCGCACATGACATGCAAGGGTAAAATCGTACTTTCACGGCTA 1707 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 A--------AGAAGGAGAGGAGGAGGAGGAGGGAGAGGAGGAGGAAGAGGAGGAGCAAGT 1784 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TTTCTCTCTATTTCCAACAGCTAATTACCAGTTTTTTGCTGTGGGACAGATACATGGTCT 1767 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 GGAGCTCGGTCCCTCCTAGCTACAG---------GATGCTCCACAG------TCATCATA 1829 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TGCACTGTCTCCTAACTAATTACTTTGCTTTTTCGATGTCCTGTAGGAAATTTTGCCATG 1827 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 GGGGCCATCTCGACCACAGCGCAAGAGAGCTCCTATTTCC-GACTGGAGGTACACTCCCA 1888 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 GTAAAAGTCCATAATCTGATAGAAAAGTGCCCGCATATCTTAACTAATAAAAAAATTGCT 1887 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ATCAGCCTCGTGCTCCA-AGGGGTAGGAAGAAGTAAGTTTTTTTTGGTGGTTTAGTTCGG 1947 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 ATCCTTCCTATCGTCAACAATTTTTCGTCCGTATGTGCGTTTTTTTTCACTTTCCACCTT 1947 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 TAACTTGTG-TACTTTATGAAACTCACAACTATACTATGACTTGCAATCCTATATTTTGA 2006 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 TTTTTAGCGCTGCTTTTTTAATCATCCAATCGGACAGAAAC--ACAGATCGAGAACCCTA 2005 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 TGAACCCACAACTATGGTTGTGTTTAGGCTTAAGTCTGTGGATGGATGTGGTTGTGATGG 2066 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 -GAAAAAAGGGGCAAAAGAGAGGAAAAAATCACACAAATGGGCAAGCTTAGAGTCGCCAG 2064 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 AGCTGGATGTGTATGGATTTTGGATGG-ATGAATGGTTATGTTTATGGATAGATGGAAGT 2125 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 ATACGGTTGTTCCGAGCTCATTGCCATCGTCGTCCACTGCGCTCGTGTCGTGCCCGAACC 2124 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ATATGTCTGTGAATGGATGGATGTATTT-------------------------------- 2153 consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 AGCCGGGCACGACCACACTTGCCACCTCCCCAACCGCGCTGGCACCCCTTTCCTCTACCA 2184 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ------------------------------------------------------------ consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CGACGCCCCATCCTCTGGCGCTCTCCTCTTGCTTTAAGGCAGAGGAGAAGAAAGAAGGAC 2244 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ------------------------------------------------------------ consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 GGCCGTCGCCACTGTCTCCGTGCCTAGCCCTGTCATCGAGGTTGATGGGGAGACGGGAAG 2304 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ------------------------------------------------------------ consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 GGTAAGAGTCGTCATCGTCGCTGTACCTCCGCCATCGCTGCACCACAAGATGGGAGGGAC 2364 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ------------------------------------------------------------ consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 AGGGGGAGATGGAGTGGCGCCGCCGGTGGGGGGAGGGGGGAGGGGGAGGGGGAGCGGCAT 2424 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ------------------------------------------------------------ consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 CGTCGATGGGTGAGGGGGAAGGGGAGCGGTGCCGCCGGTGGGGAGAGGCGCTACCAGTGA 2484 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ------------------------------------------------------------ consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 GGTAGGGAGAGAAGGAGCGACGGAGGGGGATAGGTGCCGCCGACGCCATCATTTTCAGAG 2544 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ------------------------------------------------------------ consensus_7147#3 ------------------------------------------------------------ consensus_7147#0 AGAGAGAAGGGGAGGGGAAATAATTTTATAAGATCATAAGGCGGTTTGGATGGTGGTTTT 2604 consensus_7147#2 ------------------------------------------------------------ consensus_7147#1 ------------------------ consensus_7147#3 ------------------------ consensus_7147#0 GCCTAACGTGGCGCCTACGTGGCG 2628 consensus_7147#2 ------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||