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Oryza sativa
cluster # 7149 cluster # 7149       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7149#0 length = 2625 sequences # 2  
consensus_7149#1 length = 877 sequences # 2  

consensusID : consensus_7149#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2625
fasta sequence
                              [CCTTTCCCCATTCTTTGCTCGGAGATTCCTCGTCAAACCCTAAACCCCCAAATCCACCCGCGCGGATCGTGAGGTAGGAGCTCGGGGAGCGCCGCGGGTGGCGGCAGGAGAACGGAGACGGACGGAGGATACCCTCCGGGGTGGCGCGAAGCCCGGTAGTTCCCTCTGCCGGCGTCGTCGTCGGCCGATGGCTACCGCCGCTATGTGCGACGGCGAGGGGCAGCAGGGCCGACTGCGACGAGCTTCTGTTCCACGCAATTCCACAATGGATTCGATGGACTGACCAGGAGTAAAACACGAACTGTTTAAGATAGAGAAACCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTCCTTTTGTCCATATCCTGAGAGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTTCCTCCCCAACATGACTAATATTGATATTCAGGAAGGTGACGCTAGAGAGCATAGCCATCCACTCTGGAATTCTAGGAAAATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAGGAGCAGTGAACCAAGAATTCAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATTGAACATGCAGGTACTGAAGCTTGAGTTTGCACAGTGTACTGATGGATGGAACAAAGTTATCTATTTCATGCAAGGTATTTGATGAGATGCTGTTGTCAACTTTCATATGATAAAGTTTCTGTAAAGCCTTCATGTTCCCTACTCCTGCTGGCAGACTTACTTCATCGGCAAGTAAAAACAGCAACCTTTTCAACTTCACAATACTCTTGGGTAATTCCTTTATCATTGTCTGTGTCAGATCTATTGTCTC-AAGTTGCTGTAGTT-CCCCTATTTGCTCTGGGAG-TTTGCTGATGCTTACTCTGTTCAACCTTAGGTATTTAAGACAAAACAATTTCTGTATGCCATTTAGGTGATGGTTTTCTAATTGATCATTGCATTCAATGCTAATTGTACGAAGAGCTTGAAAGTCTGAAATAGGCAGCACATTTTCAGTGGATCCATAAGTAGTGAGTGATCGAACATTCAAAACATTCATATCTGACATCACCATAATTTCTTCTTGACCATGGTAATGAACCAGTCGACGAATCTTGTCTTGTGGTCCAAAGGCATGATTCTGGTAACCAAATACTGTGATGAAATTTTCTTCAGCTGATTTGGAAATAATAAGATCAAAAATCACATCATGTACTCGACAAGCATCAACTCTGCCATCATATTGGATGCTCACTGGTTTTTGGGAGATGGACACAAATGCTTGGCAATCAAACTGCCCTCCAATTTTGTTATATACTTGACGAGCAAGAGTAGTCTTGCCCAACCCTCCAAGACCCACAACAGACACCACACTTAATCTTGACTCCAACTTTTCCCCTCCTTTAGTTAGCCAGTTGATGAGCTCTTCTGCTGGTTCATCAATACCTACTAGGGCATCTGCCTCTGCAAAAAGTGCTGGCAACCGAGGGTCAAGGGGTACCACATCAATAGAACTTGAGATGGTACCATTGAAGTTATACCTCTTTTGCCGCTCACTTGCATCGTCAACACGCGCCTTCAACTTTAGGATTTGATCAGCAATCTCATTACGAGCTCCAAGTGTCCTCAGCTTGTGAATGCTCTTCTGGAAGAAACCCTTGTGAACTCTGCTTGAGCCACCATCCATCTGATGAATAAAGTCGTCGATGCAGTCCTCGATATCGTAGGACAGCTCTCTGATTTGGTTCCTCCATTCCTTGACCTGGATATCTAGATCATCCATGTCAGCCAGCTTGAGGAGAAAAGCATTCATGCTTTGCAGCTCGAGCTTCATGGTGAGGATCTCCTCATTCACACCCTTGAAGCTGTTGTTGCACTGCCTCTCTACCAGGGCAGGGAGCTTTCCGAGAACCGAGCTGAGTACCCCAGTAGCAACACTCACCATGGTGTGCTCCATTTGTGATTTGAGGTGTATGTTTGGTGGCAACTCTAAATCTAGCTTGCTTCACAGATGCCGGGCTCAAGGAGGAGGAAGAGCTTCATTATGATAAAAGGTGAAGTGGTAGGAAGCTGTTGGTGTTACTAAACTAGTGGAGATTGGTGACAACCAATATCATGGTTCTCAGAATTTCAAATTCAATCATAAGTGTGGTTGTGATGTTAGCAAAATAAAAAAAAGATTATGAAAGAAGACAGTCGCATGGGAAGAACAACACTCTTCGGCAATAAGACAAAGTTATAAGATGGGGATTTGCTTAGGTTATCAATATATAGTGGAAAAATGTTGGAAAGCTTCAGCCATTTCCTAATGCAAGTTAGGTGTAGTGATTTTTTAATCTGCCATGTCAATCTTTGGCTCTTTGCTTCTGGTGGTCAGTCAATTAGGCATTTACAATAATTAAAAATCTAAACTATAAGGCTTTCTAAATGGTTGGTAGATCTTCATTTTAGTCCAAATAAAGCCTTGTGTTTCTTTTTTATTTTTTAACATGGTAAGCAGGTATCGAAACTCTAAACTCGATTTCTTTTTTCTTTTGGATATTATCTCAGAACTCAGATGTATTCAATATGTAAGTGAACAGTTTGCATTAATTCTTCAGCGATGGCATT]

[+] EMBL AK066086             [CCTTTCCCCATTCTTTGCTCGGAGATTCCTCGTCAAACCCTAAACCCCCAAATCCACCCGCGCGGATCGTGAGGTAGGAGCTCGGGGAGCGCCGCGGGTGGCGGCAGGAGAACGGAGACGGACGGAGGATACCCTCCGGGGTGGCGCGAAGCCCGGTAGTTCCCTCTGCCGGCGTCGTCGTCGGCCGATGGCTACCGCCGCTATGTGCGACGGCGAGGGGCAGCAGGGCCGACTGCGACGAGCTTCTGTTCCACGCAATTCCACAATGGATTCGATGGACTGACCAGGAGTAAAACACGAACTGTTTAAGATAGAGAAACCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTCCTTTTGTCCATATCCTGAGAGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTTCCTCCCCAACATGACTAATATTGATATTCAGGAAGGTGACGCTAGAGAGCATAGCCATCCACTCTGGAATTCTAGGAAAATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAGGAGCAGTGAACCAAGAATTCAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATTGAACATGCAGGTACTGAAGCTTGAGTTTGCACAGTGTACTGATGGATGGAACAAAGTTATCTATTTCATGCAAGGTATTTGATGAGATGCTGTTGTCAACTTTCATATGATAAAGTTTCTGTAAAGCCTTCATGTTCCCTACTCCTGCTGGCAGACTTACTTCATCGGCAAGTAAAAACAGCAACCTTTTCAACTTCACAATACTCTTGGGTAATTCCTTTATCATTGTCTGTGTCAGATCTATTGTCTC AAGTTGCTGTAGTT CCCCTATTTGCTCTGGGAG TTTGCTGATGCTTACTCTGTTCAACCTTAGGTATTTAAGACAAAACAATTTCTGTATGCCATTTAGGTGATGGTTTTCTAATTGATCATTGCATTCAATGCTAATTGTACGAAGAGCTTGAAAGTCTGAAATAGGCAGCACATTTTCAGTGGATCCATAAGTAGTGAGTGATCGAACATTCAAAACATTCATATCTGACATCACCATAATTTCTTCTTGACCATGGTAATGAACCAGTCGACGAATCTTGTCTTGTGGTCCAAAGGCATGATTCTGGTAACCAAATACTGTGATGAAATTTTCTTCAGCTGATTTGGAAATAATAAGATCAAAAATCACATCATGTACTCGACAAGCATCAACTCTGCCATCATATTGGATGCTCACTGGTTTTTGGGAGATGGACACAAATGCTTGGCAATCAAACTGCCCTCCAATTTTGTTATATACTTGACGAGCAAGAGTAGTCTTGCCCAACCCTCCAAGACCCACAACAGACACCACACTTAATCTTGACTCCAACTTTTCCCCTCCTTTAGTTAGCCAGTTGATGAGCTCTTCTGCTGGTTCATCAATACCTACTAGGGCATCTGCCTCTGCAAAAAGTGCTGGCAACCGAGGGTCAAGGGGTACCACATCAATAGAACTTGAGATGGTACCATTGAAGTTATACCTCTTTTGCCGCTCACTTGCATCGTCAACACGCGCCTTCAACTTTAGGATTTGATCAGCAATCTCATTACGAGCTCCAAGTGTCCTCAGCTTGTGAATGCTCTTCTGGAAGAAACCCTTGTGAACTCTGCTTGAGCCACCATCCATCTGATGAATAAAGTCGTCGATGCAGTCCTCGATATCGTAGGACAGCTCTCTGATTTGGTTCCTCCATTCCTTGACCTGGATATCTAGATCATCCATGTCAGCCAGCTTGAGGAGAAAAGCATTCATGCTTTGCAGCTCGAGCTTCATGGTGAGGATCTCCTCATTCACACCCTTGAAGCTGTTGTTGCACTGCCTCTCTACCAGGGCAGGGAGCTTTCCGAGAACCGAGCTGAGTACCCCAGTAGCAACACTCACCATGGTGTGCTCCATTTGTGATTTGAGGTGTATGTTTGGTGGCAACTCTAAATCTAGCTTGCTTCACAGATGCCGGGCTCAAGGAGGAGGAAGAGCTTCATTATGATAAAAGGTGAAGTGGTAGGAAGCTGTTGGTGTTACTAAACTAGTGGAGATTGGTGACAACCAATATCATGGTTCTCAGAATTTCAAATTCAATCATAAGTGTGGTTGTGATGTTAGCAAAATAAAAAAAAGATTATGAAAGAAGACAGTCGCATGGGAAGAACAACACTCTTCGGCAATAAGACAAAGTTATAAGATGGGGATTTGCTTAGGTTATCAATATATAGTGGAAAAATGTTGGAAAGCTTCAGCCATTTCCTAATGCAAGTTAGGTGTAGTGATTTTTTAATCTGCCATGTCAATCTTTGGCTCTTTGCTTCTGGTGGTCAGTCAATTAGGCATTTACAATAATTAAAAATCTAAACTATAAGGCTTTCTAAATGGTTGGTAGATCTTCATTTTAGTCCAAATAAAGCCTTGTGTTTCTTTTTTATTTTTTAACATGGTAAGCAGGTATCGAAACTCTAAACTCGATTTCTTTTTTCTTTTGGATATTATCTCAGAACTCAGATGTATTCAATATGTAAGTGAACAGTTTGCATTAATTCTTCAGCGATGGCATT]
[-] EMBL AU225171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCTATTGTCTCAAAGTTGCTGTAGTTCCCCCTATTTGCTCTGGGAGTTTTGCTGATGCTTACTCTGTTCAACCTNAGGTATTTAAGACAAAACAATTTCTGTATGCCATTTAGGTGATGGTTTTCTAATTGATCNTTGCATTCAATGCTAATTGTACGAAGAGCTTGAAAGTCTGAAATAGGCAGCACATTTTCAGTGGATCCATAAGTAGTGAGTGATCGAACATTCAAAACATTCATATCTGACATCACCATAATTTCTTCTTGACCATGGTAATGAACCAGTCGACGAATCTTGTCTTGTGGTCCAAAGGCATGATTCTGGTAACCAAATACTGTGATGAAATTTTCagcggc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_7149#0 CCTTTCCCCATTCTTTGCTCGGAGATTCCTCGTCAAACCCTAAACCCCCAAATCCACCCG CGCGGATCGTGAGGTAGGAGCTCGGGGAGCGCCGCGGGTGGCGGCAGGAGAACGGAGACG GACGGAGGATACCCTCCGGGGTGGCGCGAAGCCCGGTAGTTCCCTCTGCCGGCGTCGTCG TCGGCCGATGGCTACCGCCGCTATGTGCGACGGCGAGGGGCAGCAGGGCCGACTGCGACG AGCTTCTGTTCCACGCAATTCCACAATGGATTCGATGGACTGACCAGGAGTAAAACACGA ACTGTTTAAGATAGAGAAACCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTC CTTTTGTCCATATCCTGAGAGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTT CCTCCCCAACATGACTAATATTGATATTCAGGAAGGTGACGCTAGAGAGCATAGCCATCC ACTCTGGAATTCTAGGAAAATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAG GAGCAGTGAACCAAGAATTCAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATT GAACATGCAGGTACTGAAGCTTGAGTTTGCACAGTGTACTGATGGATGGAACAAAGTTAT CTATTTCATGCAAGGTATTTGATGAGATGCTGTTGTCAACTTTCATATGATAAAGTTTCT GTAAAGCCTTCATGTTCCCTACTCCTGCTGGCAGACTTACTTCATCGGCAAGTAAAAACA GCAACCTTTTCAACTTCACAATACTCTTGGGTAATTCCTTTATCATTGTCTGTGTCAGAT CTATTGTCTCAAGTTGCTGTAGTTCCCCTATTTGCTCTGGGAGTTTGCTGATGCTTACTC TGTTCAACCTTAGGTATTTAAGACAAAACAATTTCTGTATGCCATTTAGGTGATGGTTTT CTAATTGATCATTGCATTCAATGCTAATTGTACGAAGAGCTTGAAAGTCTGAAATAGGCA GCACATTTTCAGTGGATCCATAAGTAGTGAGTGATCGAACATTCAAAACATTCATATCTG ACATCACCATAATTTCTTCTTGACCATGGTAATGAACCAGTCGACGAATCTTGTCTTGTG GTCCAAAGGCATGATTCTGGTAACCAAATACTGTGATGAAATTTTCTTCAGCTGATTTGG AAATAATAAGATCAAAAATCACATCATGTACTCGACAAGCATCAACTCTGCCATCATATT GGATGCTCACTGGTTTTTGGGAGATGGACACAAATGCTTGGCAATCAAACTGCCCTCCAA TTTTGTTATATACTTGACGAGCAAGAGTAGTCTTGCCCAACCCTCCAAGACCCACAACAG ACACCACACTTAATCTTGACTCCAACTTTTCCCCTCCTTTAGTTAGCCAGTTGATGAGCT CTTCTGCTGGTTCATCAATACCTACTAGGGCATCTGCCTCTGCAAAAAGTGCTGGCAACC GAGGGTCAAGGGGTACCACATCAATAGAACTTGAGATGGTACCATTGAAGTTATACCTCT TTTGCCGCTCACTTGCATCGTCAACACGCGCCTTCAACTTTAGGATTTGATCAGCAATCT CATTACGAGCTCCAAGTGTCCTCAGCTTGTGAATGCTCTTCTGGAAGAAACCCTTGTGAA CTCTGCTTGAGCCACCATCCATCTGATGAATAAAGTCGTCGATGCAGTCCTCGATATCGT AGGACAGCTCTCTGATTTGGTTCCTCCATTCCTTGACCTGGATATCTAGATCATCCATGT CAGCCAGCTTGAGGAGAAAAGCATTCATGCTTTGCAGCTCGAGCTTCATGGTGAGGATCT CCTCATTCACACCCTTGAAGCTGTTGTTGCACTGCCTCTCTACCAGGGCAGGGAGCTTTC CGAGAACCGAGCTGAGTACCCCAGTAGCAACACTCACCATGGTGTGCTCCATTTGTGATT TGAGGTGTATGTTTGGTGGCAACTCTAAATCTAGCTTGCTTCACAGATGCCGGGCTCAAG GAGGAGGAAGAGCTTCATTATGATAAAAGGTGAAGTGGTAGGAAGCTGTTGGTGTTACTA AACTAGTGGAGATTGGTGACAACCAATATCATGGTTCTCAGAATTTCAAATTCAATCATA AGTGTGGTTGTGATGTTAGCAAAATAAAAAAAAGATTATGAAAGAAGACAGTCGCATGGG AAGAACAACACTCTTCGGCAATAAGACAAAGTTATAAGATGGGGATTTGCTTAGGTTATC AATATATAGTGGAAAAATGTTGGAAAGCTTCAGCCATTTCCTAATGCAAGTTAGGTGTAG TGATTTTTTAATCTGCCATGTCAATCTTTGGCTCTTTGCTTCTGGTGGTCAGTCAATTAG GCATTTACAATAATTAAAAATCTAAACTATAAGGCTTTCTAAATGGTTGGTAGATCTTCA TTTTAGTCCAAATAAAGCCTTGTGTTTCTTTTTTATTTTTTAACATGGTAAGCAGGTATC GAAACTCTAAACTCGATTTCTTTTTTCTTTTGGATATTATCTCAGAACTCAGATGTATTC AATATGTAAGTGAACAGTTTGCATTAATTCTTCAGCGATGGCATT



consensusID : consensus_7149#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 877
fasta sequence
                              [GCTCGGAGATTCCTCGTCAAACCCTAAACCCCCAAATCCACCCGCGCGGATCGTGAGGTAGGAGCTCGGGGAGCGCCGCGGGTGGCGGCAGGAGAACGGAGACGGACGGAGGATACCCTCCGGGGTGGCGCGAAGCCCGGTAGTTCCCTCTGCCGGCGTCGTCGGCCGATGGCTACCGCCGCTATGTGCGACGGCGAGGAGCAGCAGGGCCGACTGCGACGAGCTTCTGTTCCACGCAATTCCACAATGGATTCGATGGACTGACCAGGAGTAAAACACGAACTGTTTAAGATAGAGAAACCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTCCTTTTGTCCATATCCTGAGAGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTTCCTCCCCAACATGACTAATATTGATATTCAGGAAGGTGACGCTAGAGAGCATAGCCATCCACTCTGGAATTCTAGGAAAATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAGGAGCAGTGAACCAAGAATTCAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATTGAACATGCAGGTACTGAAGCTTGAGTTTGCACAGTGTACTGATGGATGAAACAAAGTTATCTATGTGAGTTTTACCACCAGCATACATATCATTAACGCACCAAATTATCCCAAGATACCTTAGTTCAGTCAATCTTTGTAGTTCATGCAAGGTATTTGATGAGATGCTGTTGTCAACTTTCATATGATAAAGTTTCTGTAAAGCCTTCATATTCCCTACTCCTGCTGGCAGACTTACTTTATCGGCAAGTAAAAACAGCAACCTTTTCAACTTCAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB096887             [GCTCGGAGATTCCTCGTCAAACCCTAAACCCCCAAATCCACCCGCGCGGATCGTGAGGTAGGAGCTCGGGGAGCGCCGCGGGTGGCGGCAGGAGAACGGAGACGGACGGAGGATACCCTCCGGGGTGGCGCGAAGCCCGGTAGTTCCCTCTGCCGGCGTCGTCGGCCGATGGCTACCGCCGCTATGTGCGACGGCGAGGAGCAGCAGGGCCGACTGCGACGAGCTTCTGTTCCACGCAATTCCACAATGGATTCGATGGACTGACCAGGAGTAAAACACGAACTGTTTAAGATAGAGAAACCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTCCTTTTGTCCATATCCTGAGAGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTTCCTCCCCAACATGACTAATATTGATATTCAGGAAGGTGACGCTAGAGAGCATAGCCATCCACTCTGGAATTCTAGGAAAATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAGGAGCAGTGAACCAAGAATTCAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATTGAACATGCAGGTACTGAAGCTTGAGTTTGCACAGTGTACTGATGGATGAAACAAAGTTATCTATGTGAGTTTTACCACCAGCATACATATCATTAACGCA                                                                                                                                                                                                    ]
[-] EMBL CA759346             [                                                                                                                                                                                                                                                                  ncgagccaAGGAGTAAAACCCGAACTGTTTAAGATAGAGAAACCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTCCTTTTGTCCATATCCTGAGAGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTTCCTCCCCAACATGGCTAATATTGATATTCAGGGAGGTGACGCTAGAGAGCATAGCCATCCCCTCTGGAATTCTAGGAAAATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAGGAGCAGTGAACCAAGAATTCAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATTGAACATGCAGGTACTGAAGCTTGAGTTTGCCCAGTGTACTGATGGATGAAGCAAAGTTATCTATGTGAGTTTTACCCCCAGCATACATATCATTAACGCCCCAAATTATCCCAAGATACCTTAGTTCAGTCAATCTTTGTAGTTCATGCAAGGTATTTGATGAGATGCTGTTGTCAACTTTCATATGATAAAGTTTCTGTAAAGCCTTCATATTCCCTACTCCTGCTGGCAGACTTACTTTATCGGCAAGTAAAAACAGCAACCTTTTCAACTTCAAAAAAAAAAAAAAAAAAAAA]


>consensus_7149#1 GCTCGGAGATTCCTCGTCAAACCCTAAACCCCCAAATCCACCCGCGCGGATCGTGAGGTA GGAGCTCGGGGAGCGCCGCGGGTGGCGGCAGGAGAACGGAGACGGACGGAGGATACCCTC CGGGGTGGCGCGAAGCCCGGTAGTTCCCTCTGCCGGCGTCGTCGGCCGATGGCTACCGCC GCTATGTGCGACGGCGAGGAGCAGCAGGGCCGACTGCGACGAGCTTCTGTTCCACGCAAT TCCACAATGGATTCGATGGACTGACCAGGAGTAAAACACGAACTGTTTAAGATAGAGAAA CCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTCCTTTTGTCCATATCCTGAG AGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTTCCTCCCCAACATGACTAAT ATTGATATTCAGGAAGGTGACGCTAGAGAGCATAGCCATCCACTCTGGAATTCTAGGAAA ATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAGGAGCAGTGAACCAAGAATT CAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATTGAACATGCAGGTACTGAAG CTTGAGTTTGCACAGTGTACTGATGGATGAAACAAAGTTATCTATGTGAGTTTTACCACC AGCATACATATCATTAACGCACCAAATTATCCCAAGATACCTTAGTTCAGTCAATCTTTG TAGTTCATGCAAGGTATTTGATGAGATGCTGTTGTCAACTTTCATATGATAAAGTTTCTG TAAAGCCTTCATATTCCCTACTCCTGCTGGCAGACTTACTTTATCGGCAAGTAAAAACAG CAACCTTTTCAACTTCAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7149#0      CCTTTCCCCATTCTTTGCTCGGAGATTCCTCGTCAAACCCTAAACCCCCAAATCCACCCG 60
consensus_7149#1      ----------------GCTCGGAGATTCCTCGTCAAACCCTAAACCCCCAAATCCACCCG 44
                                      ********************************************

consensus_7149#0      CGCGGATCGTGAGGTAGGAGCTCGGGGAGCGCCGCGGGTGGCGGCAGGAGAACGGAGACG 120
consensus_7149#1      CGCGGATCGTGAGGTAGGAGCTCGGGGAGCGCCGCGGGTGGCGGCAGGAGAACGGAGACG 104
                      ************************************************************

consensus_7149#0      GACGGAGGATACCCTCCGGGGTGGCGCGAAGCCCGGTAGTTCCCTCTGCCGGCGTCGTCG 180
consensus_7149#1      GACGGAGGATACCCTCCGGGGTGGCGCGAAGCCCGGTAGTTCCCTCTGCCGGCGTCGTCG 164
                      ************************************************************

consensus_7149#0      TCGGCCGATGGCTACCGCCGCTATGTGCGACGGCGAGGGGCAGCAGGGCCGACTGCGACG 240
consensus_7149#1      ---GCCGATGGCTACCGCCGCTATGTGCGACGGCGAGGAGCAGCAGGGCCGACTGCGACG 221
                         *********************************** *********************

consensus_7149#0      AGCTTCTGTTCCACGCAATTCCACAATGGATTCGATGGACTGACCAGGAGTAAAACACGA 300
consensus_7149#1      AGCTTCTGTTCCACGCAATTCCACAATGGATTCGATGGACTGACCAGGAGTAAAACACGA 281
                      ************************************************************

consensus_7149#0      ACTGTTTAAGATAGAGAAACCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTC 360
consensus_7149#1      ACTGTTTAAGATAGAGAAACCCTCTGTTGCGGATGATGAGCTTTTCATTGGGGGCTACTC 341
                      ************************************************************

consensus_7149#0      CTTTTGTCCATATCCTGAGAGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTT 420
consensus_7149#1      CTTTTGTCCATATCCTGAGAGCTAGAAGAGAAGGTAATTTGCCAAGGATCTGAAAAGCTT 401
                      ************************************************************

consensus_7149#0      CCTCCCCAACATGACTAATATTGATATTCAGGAAGGTGACGCTAGAGAGCATAGCCATCC 480
consensus_7149#1      CCTCCCCAACATGACTAATATTGATATTCAGGAAGGTGACGCTAGAGAGCATAGCCATCC 461
                      ************************************************************

consensus_7149#0      ACTCTGGAATTCTAGGAAAATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAG 540
consensus_7149#1      ACTCTGGAATTCTAGGAAAATAATAGTTTGAGCTCATCCCAAAATATCGGAGGGGATTAG 521
                      ************************************************************

consensus_7149#0      GAGCAGTGAACCAAGAATTCAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATT 600
consensus_7149#1      GAGCAGTGAACCAAGAATTCAACAAGAAATCGAGAGACGAACCATTTTCAGTACAGCATT 581
                      ************************************************************

consensus_7149#0      GAACATGCAGGTACTGAAGCTTGAGTTTGCACAGTGTACTGATGGATGGAACAAAGTTAT 660
consensus_7149#1      GAACATGCAGGTACTGAAGCTTGAGTTTGCACAGTGTACTGATGGATGAAACAAAGTTAT 641
                      ************************************************ ***********

consensus_7149#0      CTATTTCATGCAAGGTATTTGATGAGATGCTGTTGTCAACTTTCATATGATAAAGTTTCT 720
consensus_7149#1      CTAT-----------------GTGAG-TTTTACCACCAGCATACATATCATTAACGCACC 683
                      ****                  **** *  *     ** * * ***** ** **    * 

consensus_7149#0      GTAAAGCCTTCATGTTCCCTACTCCTGCTGGCAGACTTACTTCATCGGCAAGTAAAAACA 780
consensus_7149#1      AAATTATCCCAAGATACCTTAGTTCAGTCAATCTTTGTAGTTCAT--------------- 728
                        *    *   *  * ** ** * * *          ** *****               

consensus_7149#0      GCAACCTTTTCAACTTCACAATACTCTTGGGTAATTCCTTTATCATTGTCTGTGTCAGAT 840
consensus_7149#1      GCAAGGTATTTGATGAGATGCTGTTGTCAACT--TTCATATGATAAAGTTTCTGTAAAGC 786
                      ****  * **  *    *   *  * *    *  *** * *   *  ** * *** *   

consensus_7149#0      CTATTGTCTCAAGTTGCTGTAGTTCCCCTATTTGCTCTGGGAGTTTGCTGATGCT-TACT 899
consensus_7149#1      CTTCATATTC--CCTACTCCTGCTGGCAGACTTACTTTATCGGCAAGTAAAAACAGCAAC 844
                      **      **    * **   * *  *  * ** ** *    *   *   *  *   *  

consensus_7149#0      CTGTTCAACCTTAGGTATTTAAGACAAAACAATTTCTGTATGCCATTTAGGTGATGGTTT 959
consensus_7149#1      CTTTTCAACTTCAAAAAAAAAAAAAAAAAAAAA--------------------------- 877
                      ** ****** * *   *   ** * **** **                            

consensus_7149#0      TCTAATTGATCATTGCATTCAATGCTAATTGTACGAAGAGCTTGAAAGTCTGAAATAGGC 1019
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      AGCACATTTTCAGTGGATCCATAAGTAGTGAGTGATCGAACATTCAAAACATTCATATCT 1079
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      GACATCACCATAATTTCTTCTTGACCATGGTAATGAACCAGTCGACGAATCTTGTCTTGT 1139
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      GGTCCAAAGGCATGATTCTGGTAACCAAATACTGTGATGAAATTTTCTTCAGCTGATTTG 1199
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      GAAATAATAAGATCAAAAATCACATCATGTACTCGACAAGCATCAACTCTGCCATCATAT 1259
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      TGGATGCTCACTGGTTTTTGGGAGATGGACACAAATGCTTGGCAATCAAACTGCCCTCCA 1319
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      ATTTTGTTATATACTTGACGAGCAAGAGTAGTCTTGCCCAACCCTCCAAGACCCACAACA 1379
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      GACACCACACTTAATCTTGACTCCAACTTTTCCCCTCCTTTAGTTAGCCAGTTGATGAGC 1439
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      TCTTCTGCTGGTTCATCAATACCTACTAGGGCATCTGCCTCTGCAAAAAGTGCTGGCAAC 1499
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      CGAGGGTCAAGGGGTACCACATCAATAGAACTTGAGATGGTACCATTGAAGTTATACCTC 1559
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      TTTTGCCGCTCACTTGCATCGTCAACACGCGCCTTCAACTTTAGGATTTGATCAGCAATC 1619
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      TCATTACGAGCTCCAAGTGTCCTCAGCTTGTGAATGCTCTTCTGGAAGAAACCCTTGTGA 1679
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      ACTCTGCTTGAGCCACCATCCATCTGATGAATAAAGTCGTCGATGCAGTCCTCGATATCG 1739
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      TAGGACAGCTCTCTGATTTGGTTCCTCCATTCCTTGACCTGGATATCTAGATCATCCATG 1799
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      TCAGCCAGCTTGAGGAGAAAAGCATTCATGCTTTGCAGCTCGAGCTTCATGGTGAGGATC 1859
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      TCCTCATTCACACCCTTGAAGCTGTTGTTGCACTGCCTCTCTACCAGGGCAGGGAGCTTT 1919
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      CCGAGAACCGAGCTGAGTACCCCAGTAGCAACACTCACCATGGTGTGCTCCATTTGTGAT 1979
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      TTGAGGTGTATGTTTGGTGGCAACTCTAAATCTAGCTTGCTTCACAGATGCCGGGCTCAA 2039
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      GGAGGAGGAAGAGCTTCATTATGATAAAAGGTGAAGTGGTAGGAAGCTGTTGGTGTTACT 2099
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      AAACTAGTGGAGATTGGTGACAACCAATATCATGGTTCTCAGAATTTCAAATTCAATCAT 2159
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      AAGTGTGGTTGTGATGTTAGCAAAATAAAAAAAAGATTATGAAAGAAGACAGTCGCATGG 2219
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      GAAGAACAACACTCTTCGGCAATAAGACAAAGTTATAAGATGGGGATTTGCTTAGGTTAT 2279
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      CAATATATAGTGGAAAAATGTTGGAAAGCTTCAGCCATTTCCTAATGCAAGTTAGGTGTA 2339
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      GTGATTTTTTAATCTGCCATGTCAATCTTTGGCTCTTTGCTTCTGGTGGTCAGTCAATTA 2399
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      GGCATTTACAATAATTAAAAATCTAAACTATAAGGCTTTCTAAATGGTTGGTAGATCTTC 2459
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      ATTTTAGTCCAAATAAAGCCTTGTGTTTCTTTTTTATTTTTTAACATGGTAAGCAGGTAT 2519
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      CGAAACTCTAAACTCGATTTCTTTTTTCTTTTGGATATTATCTCAGAACTCAGATGTATT 2579
consensus_7149#1      ------------------------------------------------------------
                                                                                  

consensus_7149#0      CAATATGTAAGTGAACAGTTTGCATTAATTCTTCAGCGATGGCATT 2625
consensus_7149#1      ----------------------------------------------
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)