These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7150#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2211 fasta sequence [TTTTCCGGCTCAAATATCCGAATCTCACCATTCAAGATTCAACCAACCGACCAATGCCCCTCGCGTTTCGTTTCTCCCGGATTCTCAATCCGCGCCTCAACCCGTCCACGAATCTTGGCCTCGCGCTCGCCTCCTCTTTCTCCTCCTCGTCCCGCCCAGAGCAGCCGGAGCTGCCCGGGGCCCGCGGTGGCGGCGGTGGGTTCCCGGCGACCATCAGGGAAGGAAGGGCGGAGATCTTCGCCGACGACTCCAACTCGGTGTTCTACAACAAGGCCCAGGTTAACAACAGGGATCTTTCCATTGCTGTATTGAGATCGTTTATTTCGAGAAGACGTGAAGAGCATGATATCCAATTAAGAAGAGGCAGTCATGCTGAACTACCGCCGAAACATCACGCTGAAGAATTGGGCCACATAAGAGGATCATCTGAGGACAAGGCATTGAGTGAAGAAATTAGCTATAGAGCACCAAAAGTTCTTGAGGCTTTAGCTGCATCGGGATTAAGAGCCATTAGGTATGCCCTTGAAGTAGATGGGATTGGGGAAGTTATAGCTGTTGACAACAATGAAGTAGCTATAGAGGCTGTAAAAAAAAATATCCACCACAATGGCAGTGTGGCTTCTTCAAAGGTGGTACCTCATCTTGCGGATGCACGTGTTTACATGCTCACCCACCCAAAAGAATTTGATGTGGTTGACCTTGACCCTTATGGATCTCCTGCAGCATTTCTGGATTCAGCAGTTCAGTGCGTTGCAGATGGTGGTATTTTGATGTGCTCAGCTACAGACATGGCTGTGCTTGCTGGTGGCAATGCAGAAGTTTGCTTTTCCAAGTATGGGTCTTATCCACTAAAGGGCAAACACTGCCATGAGATGGCCCTGAGGATTCTTCTTGCTTGTATTGAGTCGCATGCCATCCGCCACAAGCGCTATATAGTTCCTATAATATCAGTGCACATGGATTTCTACATTAGGGTCTTTGTGCAAATCTTCACTTCAGCTAGCACAGTGAAAAGCTCACCTCTTAAATTGGCACATGTCTATCAATGTACCGGATGCAGTTCATTTCACCTACAAAACATTGGAAGGATTAATTCAAAGGACAAGAGGAATATCGCCCTACCAAATTTTTCCCCTCTTGTGCCTCAGGAATGTGCTGAATGTGGCCATAACTTTGTTATGGGGGGACCTATATGGAGTGATCCTATGCATGACAAAGAATGGGCTGCTTCCATCTTGTCAAGTATCCAAGCTATGAGTTGTGCATATTCAGCGTATGCAAAGATTTCAGCTATAATGACATCAGTATCAGAGGAATTGCCTAAAGCACCTTTATTTGTTAGTCTTCACAATTTGTGTGCAACACTGAAGTGCACCAATCCAACCATTGCTACGTTTCAATCTGCTATCAGAAATGCTGGTTATCAAATATCAGGCAGTCATGTGGATCCCTTGGCTCTTAAAACGGATGCCCCTATGTCTGTAATTTGGGACATCATGCGATGTTGGGTCAAGATTCATGCTGTAAAGTATCGACCTGGAAATCATCCAGGTACCAGGATACTGTCCCAAGAGCCTAAATTACAGGCAAAATTTTCCC-ATGTACCTGGGGGTTTAGCAGTACAGAAGAGCCCAAGATTTGTACCTAATCCTGAAAAATATTGGGGTCCTAAGACAAAGGCTGGGAGACA-ACCAAAGAGATTACCAGTGGACAATTTATAAATAT-TTACTGACAGTATGGTTGCCAACTAGGAGATTGAGATCAGTTGCATTCTTTTGTTAGAAAACCGAGCATATACAAGCTCAAGTTCAAGCTCAGTTTCTGGAGGCATGTATGTCCTTTCGAAAATTTGGTGGTCATTACAGATTACTAACGGTCAGTTGCGTGGGTTGGTGTTAACTACAGGCATGTCCA-CTTTGCTACAATTTTCAACTGCACCAAACTCTGGCATT-GCCAAATTTTGTGAAGATGGCAATCC-AACATATCCTAAATACTCTACCATACCTTACCATGCCAATATTTGGTGATTTTCTAGAAACTTCACATAATACCAAACAAGAATATTTGGCAAGGTAACAAATCAAACTACA-CCCATATACCTCTACCTTTCCAAATTTTAGGATCGTCAAACATTGCCAAATTTTGGTGTTGCCAAAAGTTGGCAAGATTTATTTTGGCATCAAAGTGAACAAGCCCTACATTTTCAAAAAA] [+] EMBL AK064907 [TTTTCCGGCTCAAATATCCGAATCTCACCATTCAAGATTCAACCAACCGACCAATGCCCCTCGCGTTTCGTTTCTCCCGGATTCTCAATCCGCGCCTCAACCCGTCCACGAATCTTGGCCTCGCGCTCGCCTCCTCTTTCTCCTCCTCGTCCCGCCCAGAGCAGCCGGAGCTGCCCGGGGCCCGCGGTGGCGGCGGTGGGTTCCCGGCGACCATCAGGGAAGGAAGGGCGGAGATCTTCGCCGACGACTCCAACTCGGTGTTCTACAACAAGGCCCAGGTTAACAACAGGGATCTTTCCATTGCTGTATTGAGATCGTTTATTTCGAGAAGACGTGAAGAGCATGATATCCAATTAAGAAGAGGCAGTCATGCTGAACTACCGCCGAAACATCACGCTGAAGAATTGGGCCACATAAGAGGATCATCTGAGGACAAGGCATTGAGTGAAGAAATTAGCTATAGAGCACCAAAAGTTCTTGAGGCTTTAGCTGCATCGGGATTAAGAGCCATTAGGTATGCCCTTGAAGTAGATGGGATTGGGGAAGTTATAGCTGTTGACAACAATGAAGTAGCTATAGAGGCTGTAAAAAAAAATATCCACCACAATGGCAGTGTGGCTTCTTCAAAGGTGGTACCTCATCTTGCGGATGCACGTGTTTACATGCTCACCCACCCAAAAGAATTTGATGTGGTTGACCTTGACCCTTATGGATCTCCTGCAGCATTTCTGGATTCAGCAGTTCAGTGCGTTGCAGATGGTGGTATTTTGATGTGCTCAGCTACAGACATGGCTGTGCTTGCTGGTGGCAATGCAGAAGTTTGCTTTTCCAAGTATGGGTCTTATCCACTAAAGGGCAAACACTGCCATGAGATGGCCCTGAGGATTCTTCTTGCTTGTATTGAGTCGCATGCCATCCGCCACAAGCGCTATATAGTTCCTATAATATCAGTGCACATGGATTTCTACATTAGGGTCTTTGTGCAAATCTTCACTTCAGCTAGCACAGTGAAAAGCTCACCTCTTAAATTGGCACATGTCTATCAATGTACCGGATGCAGTTCATTTCACCTACAAAACATTGGAAGGATTAATTCAAAGGACAAGAGGAATATCGCCCTACCAAATTTTTCCCCTCTTGTGCCTCAGGAATGTGCTGAATGTGGCCATAACTTTGTTATGGGGGGACCTATATGGAGTGATCCTATGCATGACAAAGAATGGGCTGCTTCCATCTTGTCAAGTATCCAAGCTATGAGTTGTGCATATTCAGCGTATGCAAAGATTTCAGCTATAATGACATCAGTATCAGAGGAATTGCCTAAAGCACCTTTATTTGTTAGTCTTCACAATTTGTGTGCAACACTGAAGTGCACCAATCCAACCATTGCTACGTTTCAATCTGCTATCAGAAATGCTGGTTATCAAATATCAGGCAGTCATGTGGATCCCTTGGCTCTTAAAACGGATGCCCCTATGTCTGTAATTTGGGACATCATGCGATGTTGGGTCAAGATTCATGCTGTAAAGTATCGACCTGGAAATCATCCAGGTACCAGGATACTGTCCCAAGAGCCTAAATTACAGGCAAAATTTTCCC ATGTACCTGGGGGTTTAGCAGTACAGAAGAGCCCAAGATTTGTACCTAATCCTGAAAAATATTGGGGTCCTAAGACAAAGGCTGGGAGACA ACCAAAGAGATTACCAGTGGACAATTTATAAATAT TTACTGACAGTATGGTTGCAAACTAGGAGATTGAGATCAGTTGCATTCTTTTGTTAGAAAACCGAGCATATACAAGCTCAAGTTCAAGCTCAGTT ] [+] EMBL BM037917 [ tAATTACA GCAAAATTTTCCCNATGTACCTGGGGTTTTACCAGTACAGAAGAGCCCAAGATTTGTA CTAATCCTG AAAATATT GGGTCCTAAGACAAA GCTGGGAGACACACC AAGAGATTACCAGTGGAC ATTTATAAATATNTTACTGACAGTAT GTTTCCAACTAGGAGATTGAGATCAGTTGCATTCTTTTGTTAGAAAACCAAGCATATACAAGCTCAAGTTCAAGCTCAGTTTCTGGAGGCATGTATGTCCTTTCGAAAATTTGGTGGTCATTACAGATTACTAACGGTCAGTTGCGTGGGTTGGTGTTAACTACAGGCATGTCCA CTTTGCTACAATTTTCAACTGCACCAAACTCTGGCATT GCCAAATTTTGTGAAGATGGCAATCC AACATATCCTAAATACTCTACCATACCTTACCATGCCAATATTTGGTGATTTTCTAGAAACTTCACATAATACCAAACAAGAATATTTGGCAAGGTAACAAATCAAACTACA CCCATATACCTCTACCTTTCCAAATCTTAGGATCGTCAAACATTGCTAAATTTTGGTGTTGCCAAAAGTTGGCAAGATTTATTTTGGCATCAAAGTGAACAAGCCCTACATTTTCAAAAAA] [-] EMBL BU667176 [ TATGGTTCCCAACTAGGAGATTGAGATCAGTGGCATTCTTTTGTTAGAAAACCAAGCATATACAAGCTCAAGTTCAAGCTCAGTTTCTGGAGGCATGTATGTCCTTTCGAAAATTTGGTGGTCATTACAGATTACTAACGGTCAGTTGCGTGGGTTGGTGTTAACTACAGGCATGTCCACCTTTGCTACAATTTTCAACTGCACCAAACTCTGGCATTGGCCAAATTTTGTGAAGATGCCAATCC AACATATCCTAAATACTCTACCATACCTTACCAT CCAATATTTGGTGATTTTCTAGAAACTTCACATAATACCCAACAAGAATATTTGCCAAGGTAACAAATC AACTACACCCCATATACCTCTACCTTTCCAAATTTTAGGATCGTCAAACATGCCCAAATTTTGGTGTT CCCAAAGTTGCCAAGATTTATTTTGGCATCAAAGTGAA ] [-] EMBL AU225176 [ ccgctGATCAG TGCATTCTTTTGTTAGAAAACNGAGCATATACAAGCTCAAGTTCAAGCTCAGTTTCTGGAGGCATGTATGTCCTTTCGAAAATTTGGTGGTCATTACAGATTACTAACGGTCAGTTGCGTGGGTTGGTGTTAACTACAGGCATGTCCA CTTTGCTACAATTTTCAACTGCACCAAACTCTGGCATT GCCAAATTTTGTGAAGATGGCAATCCAAACATATCCTAAATACTCTACCATACCTTACCATGCCAATATTTGGTGATTTTCTAGAAACTTCACATAATACCAAACAAGAATATTTGGCAAGGTAACAAATCAAACTACA CCCATATACCTCTACCTTTCCAAATTTTAGCATCGTCAAACATTGCCAAATTTTGGTGTTGCCAAAAGTTGGCAAGATTTATTTTGGCATCAAAGTGAACAAGCCCTACAgcggc ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||