Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7161 cluster # 7161       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7161#0 length = 505 sequences # 4  

consensusID : consensus_7161#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 505
fasta sequence
                              [ACCTGACTGGACTGAAGGAGTAG--AAAAAAACTCGAAGTCGATCGCCATCTCCAATTCTCCATCGATCATCTATCTCTCACGATCATCTCGCCGGAGCTGTGTAGTGGTGGTGAGGAGGAGGATGATGATGAGGTGTGGTTGGTCGGCGGCGGCGGTGGTTGCGGTGGTCGTCATGGTTGGTGTGATGGTGGCGTCGCCGGTGGCGGGGGAGCTAGCTCGGGTGGAGCACCCGACGAAGGAGGACGGGTCGCTGGCGGTGCTCGTCGTTGGCGACTGGGGGAGGAAGGGGCAGTACAACCAGACGTTGGTTGCCACCCAGATGGGCGTGATCGGGGAGGAGTTGGCTGCCGACTTCATCCTCTCCACCGGCGACAATTTCTACAACGATGGCCTCACCGGCGACAACGACACGGCCAGCTTCCAGGAGTCCTTCANCAACATCTACAACGTTGATAGCTTCAGAAGCCTTGGTAAATGNTCTCGCAACACCACCTCAAGACTATTG]

[+] EMBL CF280466             [ACCTGACTGGACTGAAGGAGTAGAAAAAAAAACTCGAAGTCGATCGCCATCTCCAATTCTCCATCGATCATCTATCTCTC CGATC TCTCGCCGGA CTGTGTA TGGTGGTGAGGAGGAGGATGATGATG GGTGGGGGTGGTCGGCGGCGGCGGTGGTTGCGGTGGTCGTCATGGTTGGTGTGATGGTGGCGTCGCCGGTGGCGGGGGAGCTAGCTCGGGTGGAGCACCCGACGAAGGAGGACGGGTCGCTGGCGGTGCTCGTCGTTGGCGACTGGGGGAGGAAGGGGCAGTACAACCAGACGTTGGTTGCCACCCAGATGGGCGTGATCGGGGAGGAGTTGGCTGCCGACTTCATCCTCTCCACCGGCGACAATTTCTACAACGATGGCCTCACCGGCGACAACGACACGGCCAGCTTC                                                                                    ]
[+] EMBL CF309042             [          ACTGAAGGAGTAG  AAAAAAACTCGAAGTCGATCGCCATCTCCAATTCTCCATCGATCATCTATCTCTCACGATCATCTCGCCGGAGCTGTGTAGTGGTGGTGAGGAGGAGGATGATGATGAGGTGTGGTTGGTCGGCGGCGGCGGTGGTTGCGGTGGTCGTCATGGTTGGTGTGATGGTGGCGTCGCCGGTGGCGGGGGAGCTAGCTCGGGTGGAGCACCCGACGAAGGAGGACGGGTCGCTGGCGGTGCTCGTCGTTGGCGACTGGGGGAGGAAGGGGCAGTACAACCAGACGTTGGTTGCCACCCAGATGGGCGTGATCGGGGGGGAGTTGGCTGCCG                                                                                                                                                           ]
[+] EMBL OSS4858A             [                                                 TCTCCAATTCTCCATCGATCATCTATCTCTCACGATCATCTCGCCGGAGCTGTGTAGTGGTGGTGAGGAGGAGAATGATGATGAGGTGTGGTTGGTCGTCGGCGGCGTTGGTTGCGNTGGTCGTCATGGTTGGTGTGATGGTGGCGTNGCCGGTGG GGGGGAGCTAGCTCGGGTGGAGCACCCGACGAAGGAGGACGGGTCGCTGGCGGTGCTCGTCGTTGGCGACTGGGGGAGGAAGGGGCAGTACAACCAGACGTTGGTTGCCACCCAGATGGGCGTGATCGGGGAGGAGTTGGTTGCCGACTTCATCCTCTCCACCGGCGACAATTTCTACAACGATGGCCTCACCTGCGACAACGACACGNCCAGCTTCCAGGAGTCCTTCANCAACATCTACAACGTTGATAGCTTCAGAAGCCTTGGTAAATGNTCTCGCAACACCACCTCAAGACTATTG]
[+] EMBL CB652018             [                                                                       CTATCCTTCACGATCATCTCGCCGGAGCTGTGTAGTGGTGGTGAGGAGGAGAATGATGATGAGGTGTGGTTGGTCGGCGGCGGCGGTGGTTGCGGTGGTCGTCATGGTTGGTGTGATGGTGGCGTCGCCGGTGGCGGGGGAGCTAGCTCGGGTGGAGCACCCGACGAAGGAGGACGGGTCGCTGGCGGTGCTCGTCGTTGGCGACTGGGGGAGGAAGGGGCAGTACAACCAGACGTTGGTTGCCACCCAGATGGGCGTGATCGGGGAGGAGTTGGCTGCCGACTTCATCCTCTCCACCGGCGACAATTTCTACAACGATGGCCTCACCGGCGACAACGACACGGCCAGCTTC                                                                                    ]


>consensus_7161#0 ACCTGACTGGACTGAAGGAGTAGAAAAAAACTCGAAGTCGATCGCCATCTCCAATTCTCC ATCGATCATCTATCTCTCACGATCATCTCGCCGGAGCTGTGTAGTGGTGGTGAGGAGGAG GATGATGATGAGGTGTGGTTGGTCGGCGGCGGCGGTGGTTGCGGTGGTCGTCATGGTTGG TGTGATGGTGGCGTCGCCGGTGGCGGGGGAGCTAGCTCGGGTGGAGCACCCGACGAAGGA GGACGGGTCGCTGGCGGTGCTCGTCGTTGGCGACTGGGGGAGGAAGGGGCAGTACAACCA GACGTTGGTTGCCACCCAGATGGGCGTGATCGGGGAGGAGTTGGCTGCCGACTTCATCCT CTCCACCGGCGACAATTTCTACAACGATGGCCTCACCGGCGACAACGACACGGCCAGCTT CCAGGAGTCCTTCANCAACATCTACAACGTTGATAGCTTCAGAAGCCTTGGTAAATGNTC TCGCAACACCACCTCAAGACTATTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)