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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7164 cluster # 7164       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7164#0 length = 860 sequences # 4  

consensusID : consensus_7164#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 860
fasta sequence
                              [TGGAAAGTACACAATTTGATTTAATATGCATCCTTTCAAGATGCTGTAACAAGTCAACAACACTGTTTGGGTTGGGGATGCAAGTTATGTACACCAAAAAAAGAATCAATCGACTACTATGTTGTAACAAAAACTCAAAATCATAAACAAGAAACATCTTTTTTTGTAATGTTCTACGGTTCATGTACATCACAGAGGGGGAAAAACTGAAAGTCTGAGACCCAGTGCAAGCTTTGTTTGAGGCTGCTAGGTCAGATCCTCGACATCGGACGATTCCTCGTTGGTGGTGTCCATCTCATCTTTTGTGGTGGTGTTTTTCAGCTCTTCTTTGGTGCTGTTCAGCTCCTCTTCTTTGGTAGAGTTCGCCTCTCTCCGCGAAAGTTCCCATAGTAGCTGTTCGATTCCTAGGCGCCTCAGCTCGCGTATACCCATATCAACATCTACAGCATCATGTGAGGTGGGCTGCTGCCCATGTCGATCAATCCACATCTGCAACCGCTCCTCAGCAATATCATCTTCCACGTTATGGGTTTTAGCCCTTCTCCAGAAATATACGAGCCATGCCTGCTTGAACAATACATCTTCCTCTTCCTCCTTGCTGAGATCAAATGCTTCAGTGAATTTTTCATCACCAGATGATTTAATATCTGGGTCTACTAGTTCAGCAACATTAGGACGATGATGATGGGCAAGAGCAATAAGAACAGCATCCTCAACCTTCAAGAAAGCTAGTTCTTGAAGCCCTTTATCAACAGAAAGCATGGTTTCTATGTTGCCTTCTCCAGCTGTTACTGTCAACTCATGAACAAACCTTTCTGTGTCTTCCAAATCATCACCACTACGAAGAGATCCATCCTTAG]

[+] EMBL CB661029             [TGGAAAGTACACAATTTGATTTAATATGCATCCTTTCAAGATGCTGTAACAAGTCAACAACACTGTTTGGGTTGGGGATGCAAGTTATGTACACCAAAAAAAGAATCAATCGACTACTATGTTGTAACAAAAACTCAAAATCATAAACAAGAAACATCTTTTTTTGTAATGTTCTACGGTTCATGTACATCACAGAGGGGGAAAAACTGAAAGTCTGAGACCCAGTGCAAGCTTTGTTTGAGGCTGCTAGGTCAGATCCTCGACATCGGACGATTCCTCGTTGGTGGTGTCCATCTCATCTTTTGTGGTGGTGTTTTTCAGCTCTTCTTTGGTGCTGTTCAGCTCCTCTTCTTTGGTAGAGTTCGCCTCTCTCCGCGAAAGTTCCCATAGTAGCTGTTCGATTCCTAGGCGCCTCAGCTCGCGTATACCCATATCAACATCTACAGCATCATGTGAGGTGGGCTGCTGCCCATGTCGATCAATCCACATCTGCAACCGCTCCTCAGCAATATCATCTTCCACGTTATGGGTTTTAGCCCTTCTCCAGAAATATACGAGCCATGCCTGCTTGAACAATACATCTTCCTCTTCCTCCTTGCTGAGATCAAATGCTTCAGTGAATTTTTCATCACCAGATGATTTAATATCTGGGTCTACTAGTTCAGCAACATTAGGACGATGATGATGGGCAAGAGCAATAAGAACAGCATCCTCAACCTTCAAGAAAGCTAGTTCTTGAAGCCCTTTATCAACAGAAAGCATGGTT                                                                                              ]
[+] EMBL CB665336             [           CAATTTGATTTAATATGCATCCTTTCAAGATGCTGTAACAAGTCAACAACACTGTTTGGGTTGGGGATGCAAGTTATGTACACCAAAAAAAGAATCAATCGACTACTATGTTGTAACAAAAACTCAAAATCATAAACAAGAAACATCTTTTTTTGTAATGTTCTACGGTTCATGTACATCACAGAGGGGGAAAAACTGAAAGTCTGAGACCCAGTGCAAGCTTTGTTTGAGGCTGCTAGGTCAGATCCTCGACATCGGACGATTCCTCGTTGGTGGTGTCCATCTCATCTTTTGTGGTGGTGTTTTTCAGCTCTTCTTTGGTGCTGTTCAGCTCCTCTTCTTTGGTAGAGTTCGCCTCTCTCCGCGAAAGTTCCCATAGTAGCTGTTCGATTCCTAGGCGCCTCAGCTCGCGTATACCCATATCAACATCTACAGCATCATGTGAGGTGGGCTGCTGCCCATGTCGATCAATCCACATCTGCAACCGCTCCTCAGCAATATCATCTTCCACGTTATGGGTTTTAGCCCTTCTCCAGAAATATACGAGCCATGCCTGCTTGAACAATACATCTTCCTCTTCCTCCTTGCTGAGATCAAATGCTTCAGTGAATTTTTCATCACCAGATGATTTAATATCTGGGTCTACTAGTTCAGCAACATTAGGACGATGATGATGGGCAAGAGCAATAAGAACAGCATCCTCAACCTTCAAGAAAGCTAGTTCTTGAAGCCCTTTATCAACAGAAAGCATGGTTTCTATGTTGCCTTCTCCAGCTGTTACT                                                                   ]
[+] EMBL CB637431             [           ttATTTGATTTAATATGCATCCTTTCAAGATGCTGTAACAAGTCAACAACACTGTTTGGGTTGGGGATGCAAGTTATGTACACCAAAAAAAGAATCAATCGACTACTATGTTGTAACAAAAACTCAAAATCATAAACAAGAAACATCTTTTTTTGTAATGTTCTACGGTTCATGTACATCACAGAGGGGGAAAAACTGAAAGTCTGAGACCCAGTGCAAGCTTTGTTTGAGGCTGCTAGGTCAAATCCTCGACATCGGACGATTCCTCGTTGGTGGTGTCCATCTCATCTTTTGTGGTGGTGTTTTTCAGCTCTTCTTTGGTGCTGTTCAACTCCTCTTCTTTGGTAGAGTTCGCCTCTCTCCGCGAAAGTTCCCATAGTAGCTGTTCGATTCCTAGGCGCCTCAGCTCGCGTATACCCATATCAACATCTACAGCATCATGTGAGGTGGGCTGCTGCCCATGTCAATCAATCCACATCTGCAACCGCTCCTCAGCAATATCATCTTCCACGTTATGGGTTTTAGCCCTTCTCCAGAAATATACGAG                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CA764617             [                                                                                                                                                                                            ATCCCAGAGGGGNAAAANCTAAAAGTNTGAGACCCAGTGCAAGCTTTGTTTGAGGCTGNTAGGTCAGATCCTCGACATCGGACGATNCCTCGTTGGTGGTGTCCATCCCATCTTTTGTGGTGGTGTTTTTCAGCTCTNCTTTGGTGCTGTTCAGCTCCTCTTCTTTGGTAGAGTTCGCCTCTCTCCGCGAAAGTTCCCATAGTAGCTGTTCGATTCCTAGGCGCCTCAGCTCGCGTATACCCATATCAACATCTACAGCATCATGTGAGGTGGGCTGCCGCCCATGTCGATCAATCCACATCTGCAACCGCTCCTCAGCAATATCATCTTCCACGTTATGGGTTTTAGCCCTTCTCCAGAAATATACGAGCCATGCCTGCTTGAACAATACATCTTCCTCTTCCTCCTTGCTGAGATCAAATGCTTCAGTGAATTTTTCATCACCAGATGATTTAATATCTGGGTCTACTAGTTCAGCAACATTAGGACGATGATGATGGGCAAGAGCAATAAGAACAGCATCCTCAACCTTCAAGAAAGCTAGTTCTTGAAGCCCTTTATCAACAGAAAGCATGGTTTCTATGTTGCCTTCTCCAGCTGTTACTGTCAACTCATGAACAAACCTTTCTGTGTCTTCCAAATCATCACCACTACGAAGAGATCCATCCTTAG]


>consensus_7164#0 TGGAAAGTACACAATTTGATTTAATATGCATCCTTTCAAGATGCTGTAACAAGTCAACAA CACTGTTTGGGTTGGGGATGCAAGTTATGTACACCAAAAAAAGAATCAATCGACTACTAT GTTGTAACAAAAACTCAAAATCATAAACAAGAAACATCTTTTTTTGTAATGTTCTACGGT TCATGTACATCACAGAGGGGGAAAAACTGAAAGTCTGAGACCCAGTGCAAGCTTTGTTTG AGGCTGCTAGGTCAGATCCTCGACATCGGACGATTCCTCGTTGGTGGTGTCCATCTCATC TTTTGTGGTGGTGTTTTTCAGCTCTTCTTTGGTGCTGTTCAGCTCCTCTTCTTTGGTAGA GTTCGCCTCTCTCCGCGAAAGTTCCCATAGTAGCTGTTCGATTCCTAGGCGCCTCAGCTC GCGTATACCCATATCAACATCTACAGCATCATGTGAGGTGGGCTGCTGCCCATGTCGATC AATCCACATCTGCAACCGCTCCTCAGCAATATCATCTTCCACGTTATGGGTTTTAGCCCT TCTCCAGAAATATACGAGCCATGCCTGCTTGAACAATACATCTTCCTCTTCCTCCTTGCT GAGATCAAATGCTTCAGTGAATTTTTCATCACCAGATGATTTAATATCTGGGTCTACTAG TTCAGCAACATTAGGACGATGATGATGGGCAAGAGCAATAAGAACAGCATCCTCAACCTT CAAGAAAGCTAGTTCTTGAAGCCCTTTATCAACAGAAAGCATGGTTTCTATGTTGCCTTC TCCAGCTGTTACTGTCAACTCATGAACAAACCTTTCTGTGTCTTCCAAATCATCACCACT ACGAAGAGATCCATCCTTAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)