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Oryza sativa
cluster # 7166 cluster # 7166       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7166#0 length = 1129 sequences # 4  

consensusID : consensus_7166#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1129
fasta sequence
                              [CACTCCTCTGCTGCTCAGCTCTCCCTGTCCCTGTCCATCATGGCGTCGGAATCCGAATGCGTCGCCGTTGCTGAGCCGCCGCACGTGCACGTGCAC-CTGCACCCCGACGGCACGGAGCCACTGGCCCACATCGCCGTCGACTACTGCCCCGAGGCCTGCCACCACGCCTCCGAGGACGGCGAGATCCACGTCACCTACGACGACCGCGGCGGCGCGCGCTGGCGGTCCCGCTGCCGCTTCCTCCCAGGCGGCGCCGTCGCCGCCACCATCCGCGCGCCGGCCGGGGACACCGCCGGCCTCAACTACAACCTCTACCTCTCCTCCCTCGAGGGCTCCCGCGACATGGACGAGATCGACTTCGAGTTCCTCGGCCACGACAAGTGCGCCGTGCAGACCAACTTCCACGTCGCCGGCGGCGGCGGGAGGGAGCAGATCCACGTCCTCCCGTTCGACTCCTCCGACGGATTCCACCACTACGCCATCGCCTGGGGCGCCGACGCCATCGAGTGGCGCATCGACGGCGAGCTGATCCGGAGGGAGGAGCGCGTCGCCGGCGAGCCGTGGCCGGAGAAACCCATGTTCCTGTACGCGTCCGTGTGGGACGCCAGCCACATCAACGACGGGAAGTGGACCGGCACCTACCACGGCCGCGACGCGCCATACGTCTGCAGCTACAGGGATATCAGGGTGCCCCTTGCGCTCTCGTTGGAAGACGAGGAAGATCCATACAAGTGTGCATGTGTAGGAGATGCGTCTGCTGCCATCGCCGCCGCCGATGCTGCGGAACAGGTGGATGCTGGAGATGCGCCTGCTGCCGCCGCCGCCGCTGATGCTGCGGAAGAGGTGGATGCCGGGGATGCGCCTGCTGCCACCGCGGCCGCCGATGTTGCGGAACAGGTGGATGCCGGAGATGTGCCTGCTTCCGCCGCCGCCGCTGATGCTGTGAAAGAGGTGGACGCCGGAGCTGGTAAAGATTAGATGATTAGATCTTTGCGCCTGTACTGTTGTTCGTTTCTGTCGTTGATTTGTGGGGGAAACGTGTTTGAAGGTTTGATTGTAACAATAACATGAAATCTTGTATAAGTTGGTTCAATAAAATGTCTGAATTTTCTGCATTTGGTAAAAAAAA]

[+] EMBL AK073730             [CACTCCTCTGCTGCTCAGCTCTCCCTGTCCCTGTCCATCATGGCGTCGGAATCCGAATGCGTCGCCGTTGCTGAGCCGCCGCACGTGCACGTGCAC CTGCACCCCGACGGCACGGAGCCACTGGCCCACATCGCCGTCGACTACTGCCCCGAGGCCTGCCACCACGCCTCCGAGGACGGCGAGATCCACGTCACCTACGACGACCGCGGCGGCGCGCGCTGGCGGTCCCGCTGCCGCTTCCTCCCAGGCGGCGCCGTCGCCGCCACCATCCGCGCGCCGGCCGGGGACACCGCCGGCCTCAACTACAACCTCTACCTCTCCTCCCTCGAGGGCTCCCGCGACATGGACGAGATCGACTTCGAGTTCCTCGGCCACGACAAGTGCGCCGTGCAGACCAACTTCCACGTCGCCGGCGGCGGCGGGAGGGAGCAGATCCACGTCCTCCCGTTCGACTCCTCCGACGGATTCCACCACTACGCCATCGCCTGGGGCGCCGACGCCATCGAGTGGCGCATCGACGGCGAGCTGATCCGGAGGGAGGAGCGCGTCGCCGGCGAGCCGTGGCCGGAGAAACCCATGTTCCTGTACGCGTCCGTGTGGGACGCCAGCCACATCAACGACGGGAAGTGGACCGGCACCTACCACGGCCGCGACGCGCCATACGTCTGCAGCTACAGGGATATCAGGGTGCCCCTTGCGCTCTCGTTGGAAGACGAGGAAGATCCATACAAGTGTGCATGTGTAGGAGATGCGTCTGCTGCCATCGCCGCCGCCGATGCTGCGGAACAGGTGGATGCTGGAGATGCGCCTGCTGCCGCCGCCGCCGCTGATGCTGCGGAAGAGGTGGATGCCGGGGATGCGCCTGCTGCCACCGCGGCCGCCGATGTTGCGGAACAGGTGGATGCCGGAGATGTGCCTGCTTCCGCCGCCGCCGCTGATGCTGTGAAAGAGGTGGACGCCGGAGCTGGTAAAGATTAGATGATTAGATCTTTGCGCCTGTACTGTTGTTCGTTTCTGTCGTTGATTTGTGGGGGAAACGTGTTTGAAGGTTTGATTGTAACAATAACATGAAATCTTGTATAAGTTGGTTCAATAAAATGTCTG                         ]
[+] EMBL OS0394A              [           TGCTCAGCTCTCCCTGTCCCTGTCCATCATGGCGTCGGAATCCGAATNCGTCGCCGTTGCTGAGCCGCCGCACGTGCACGT CACACTGCACCCCGACGGCACGGAGCCACTGGCCCACATCGCCGTCGACTACTGCCCCGAGGCCTGCCACCACGCCTCCGAGGACGGCGAGATCCACGTCACCTACGACGACCGCGGCGGCGCGCGCTGGCGGTCCCGCTGCCGCTTCCTCCCAGGAGGCG CGTCG CGCAGCCATCCGNGCGCCGGCCGGGGACAGCGNCGGNCTCAACTACAACCTNTANCTGTNCTnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU093350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGTGGCCGGAGAAACCCATGTTCCTGTACGCGTCCGTGTGGGACGCCAGCNACATCAACGACGGGAAGTGGACCGGNACCTACCACGGCCGCGACGCGCCATACGTCTGCAGCTACAGGGATATCAGGGTGCCCCTTGCGCTCTCGTTGGAAGACGAGGAAGATCCATACAAGTGTGCATGTGTAGGAGATGCGTCTGCTGCCATCGCCGCCGCCGATGCTGCGGAACAGGTGGATGCTGGAGATGCGCCTGCTGCCGCCGCCGCCGCTGATGCTGCGGAAGAGGTGGATGCCGGGGATGCGC                                                                                                                                                                                                                                                                           ]
[+] EMBL BI811669             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCGGAGATGTGCCTGCTTCCGCTGCCGCCGCTGATGCTGTGAAAGAGGTGGACGCCGGAGCTGGTAAAGATTAGATGATTAGATCTTTGCGCCTGTACTGTTGTTCGTTTCTGTCGTTGATTTGTGGGGGAAACGTGTTTGAAGGTTTGATTGTAAC ATAACATGAAATCTTGTATAAGTTGGTTCAATAAAATGTCTGAATTTTCTGCATTTGGTAAAAAAAA]


>consensus_7166#0 CACTCCTCTGCTGCTCAGCTCTCCCTGTCCCTGTCCATCATGGCGTCGGAATCCGAATGC GTCGCCGTTGCTGAGCCGCCGCACGTGCACGTGCACCTGCACCCCGACGGCACGGAGCCA CTGGCCCACATCGCCGTCGACTACTGCCCCGAGGCCTGCCACCACGCCTCCGAGGACGGC GAGATCCACGTCACCTACGACGACCGCGGCGGCGCGCGCTGGCGGTCCCGCTGCCGCTTC CTCCCAGGCGGCGCCGTCGCCGCCACCATCCGCGCGCCGGCCGGGGACACCGCCGGCCTC AACTACAACCTCTACCTCTCCTCCCTCGAGGGCTCCCGCGACATGGACGAGATCGACTTC GAGTTCCTCGGCCACGACAAGTGCGCCGTGCAGACCAACTTCCACGTCGCCGGCGGCGGC GGGAGGGAGCAGATCCACGTCCTCCCGTTCGACTCCTCCGACGGATTCCACCACTACGCC ATCGCCTGGGGCGCCGACGCCATCGAGTGGCGCATCGACGGCGAGCTGATCCGGAGGGAG GAGCGCGTCGCCGGCGAGCCGTGGCCGGAGAAACCCATGTTCCTGTACGCGTCCGTGTGG GACGCCAGCCACATCAACGACGGGAAGTGGACCGGCACCTACCACGGCCGCGACGCGCCA TACGTCTGCAGCTACAGGGATATCAGGGTGCCCCTTGCGCTCTCGTTGGAAGACGAGGAA GATCCATACAAGTGTGCATGTGTAGGAGATGCGTCTGCTGCCATCGCCGCCGCCGATGCT GCGGAACAGGTGGATGCTGGAGATGCGCCTGCTGCCGCCGCCGCCGCTGATGCTGCGGAA GAGGTGGATGCCGGGGATGCGCCTGCTGCCACCGCGGCCGCCGATGTTGCGGAACAGGTG GATGCCGGAGATGTGCCTGCTTCCGCCGCCGCCGCTGATGCTGTGAAAGAGGTGGACGCC GGAGCTGGTAAAGATTAGATGATTAGATCTTTGCGCCTGTACTGTTGTTCGTTTCTGTCG TTGATTTGTGGGGGAAACGTGTTTGAAGGTTTGATTGTAACAATAACATGAAATCTTGTA TAAGTTGGTTCAATAAAATGTCTGAATTTTCTGCATTTGGTAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)