These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7176#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1615 fasta sequence [CCATCTCTAGAACTTTCCATCTCGCCTCCGCCTCCGCCTCCGCCTCCCCCCACCTCCTAAGCTCCAAACCCAAGAAACCCTCCTCCTCCGCCGCCCGCCGCCCAATCCGACCCGCCGGAGCGCGAAGGGAGAAACAGGGCAGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAGGATGCCGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAAGAAGCAGAAGGTCGTGGAGGACAAGACGTTCGGGCTCAAGAACAAGAACAAGAGCAAGAACGTCCAGAAGTACGTCCAGTCCCTGCATCAGGCCGTCCAGCCCAAGCCCGACCCGACCAAGACCGCCGCCAAGAAGAAGAAGGAGGAGGAGAAGGCGCGCGAGAAGGAACTCAATGATCTATTCAAGGTCGCCGTCAGCCAGCCCAAGGTCCCAGTTGGTGTCGATCCCAAGTCCATAGTGTGTGAATTCTTTAAGGTTGGCCAGTGCCAGAAGGGTTTTAAGTGCAAGTTCTCACATGACCTTAATGTCCAAAGAAAGGGTGAAAAGATTGATATTTACACTGACAAGCGTGATGCAGAAACCATGGAAGACTGGGACCAGGAGACTCTTGAGAAGGTTGTTGCGTCAAAAGGAGCAGAGTACCAGCAGAATAAACCTACTGATATTGTTTGCAAGTACTTTCTTGATGCCGTGGAGAAGAAACAGTACGGTTGGTTTTGGGTTTGCCCAAATGGGGGCAAAGATTGCCACTACAGGCATGCACTTCCACCTGGCTATGTACTGAAGTCCCAAATGAAGGCCTTATTGGAGGAAGAGAGTGAAAAGATTGCTATCGAAGATGAGATTGAAGATCAGCGTAAAAAGGTAAAAACAACAACTCCTATGACCACAGATTTATTCATGGAATGGAAAAGGAAGAAGGCAGAAGAAAGAGAAGCTGGTCTGGCTGCCTTGAGGGCAGAGAGGGCTAAGAATGATCGCATGAGTGGCCGTGAGCTGTTCATGGCTGATTCAAGTGTGTTCGTTGATGATGCTGAAGCATATGATGTATATGAAAGACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAGTTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGATGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCATTCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAGGCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTGCTTTAGAAACAAAAAAGGTGGAAGGTGGAGCATAGATGCAAGTGCAATTTGTTTCAACCAGACTGATCATCTATCCATGATTAGTGAATGATGCTCAGTGCTGTTATGACATGACAATTGATTTTTTGACGCATCTGCCCTTTATATTATCTTTGCGGGAGTTACGTTGCTACTTGTGAATAACATGACTACTTTTTGGCCTCGTGCACACTATAACCGATTTTTGATGTGAAACATTGCCATAAGT] [+] EMBL AK106074 [CCATCTCTAGAACTTTCCATCTCGCCTCCGCCTCCGCCTCCGCCTCCCCCCACCTCCTAAGCTCCAAACCCAAGAAACCCTCCTCCTCCGCCGCCCGCCGCCCAATCCGACCCGCCGGAGCGCGAAGGGAGAAACAGGGCAGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAGGATGCCGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAAGAAGCAGAAGGTCGTGGAGGACAAGACGTTCGGGCTCAAGAACAAGAACAAGAGCAAGAACGTCCAGAAGTACGTCCAGTCCCTGCATCAGGCCGTCCAGCCCAAGCCCGACCCGACCAAGACCGCCGCCAAGAAGAAGAAGGAGGAGGAGAAGGCGCGCGAGAAGGAACTCAATGATCTATTCAAGGTCGCCGTCAGCCAGCCCAAGGTCCCAGTTGGTGTCGATCCCAAGTCCATAGTGTGTGAATTCTTTAAGGTTGGCCAGTGCCAGAAGGGTTTTAAGTGCAAGTTCTCACATGACCTTAATGTCCAAAGAAAGGGTGAAAAGATTGATATTTACACTGACAAGCGTGATGCAGAAACCATGGAAGACTGGGACCAGGAGACTCTTGAGAAGGTTGTTGCGTCAAAAGGAGCAGAGTACCAGCAGAATAAACCTACTGATATTGTTTGCAAGTACTTTCTTGATGCCGTGGAGAAGAAACAGTACGGTTGGTTTTGGGTTTGCCCAAATGGGGGCAAAGATTGCCACTACAGGCATGCACTTCCACCTGGCTATGTACTGAAGTCCCAAATGAAGGCCTTATTGGAGGAAGAGAGTGAAAAGATTGCTATCGAAGATGAGATTGAAGATCAGCGTAAAAAGGTAAAAACAACAACTCCTATGACCACAGATTTATTCATGGAATGGAAAAGGAAGAAGGCAGAAGAAAGAGAAGCTGGTCTGGCTGCCTTGAGGGCAGAGAGGGCTAAGAATGATCGCATGAGTGGCCGTGAGCTGTTCATGGCTGATTCAAGTGTGTTCGTTGATGATGCTGAAGCATATGATGTATATGAAAGACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAGTTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGATGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCATTCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAGGCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTGCTTTAGAAACAAAAAAGGTGGAAGGTGGAGCATAGATGCAAGTGCAATTTGTTTCAACCAGACTGATCATCTATCCATGATTAGTGAATGATGCTCAGTGCTGTTATGACATGACAATTGATTTTTTGACGCATCTGCCCTTTATATTATCTTTGCGGGAGTTACGTTGCTACTTGTGAATAACATGACTACTTTTTGGCCTCGTGCACACTATAACCGAT ] [+] EMBL AK101559 [ CCTCCTAAGCTCCAAACCCAAGAAACCCTCCTCCTCCGCCGCCCGCCGCCCAATCCGACCCGCCGGAGCGCGAAGGGAGAAACAGGGCAGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAGGATGCCGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAAGAAGCAGAAGGTCGTGGAGGACAAGACGTTCGGGCTCAAGAACAAGAACAAGAGCAAGAACGTCCAGAAGTACGTCCAGTCCCTGCATCAGGCCGTCCAGCCCAAGCCCGACCCGACCAAGGCCGCCGCCAAGAAGAAGAAGGAGGAGGAGAAGGCGCGCGAGAAGGAACTCAATGATCTATTCAAGGTCGCCGTCAGCCAGCCCAAGGTCCCAGTTGGTGTCGATCCCAAGTCCATAGTGTGTGAATTCTTTAAGGTTGGCCAGTGCCAGAAGGGTTTTAAGTGCAAGTTCTCACATGACCTTAATGTCCAAAGAAAGGGTGAAAAGATTGATATTTACACTGACAAGCGTGATGCAGAAACCATGGAAGACTGGGACCAGGAGACTCTTGAGAAGGTTGTTGCGTCAAAAGGAGCAGAGTACCAGCAGAATAAACCTACTGATATTGTTTGCAAGTACTTTCTTGATGCCGTGGAGAAGAAACAGTACGGTTGGTTTTGGGTTTGCCCAAATGGGGGCAAAGATTGCCACTACAGGCATGCACTTCCACCTGGCTATGTACTGAAGTCCCAAATGAAGGCCTTATTGGAGGAAGAGAGTGAAAAGATTGCTATCGAAGATGAGATTGAAGATCAGCGTAAAAAGGTAAAAACAACAACTCCTATGACCACAGATTTATTCATGGAATGGAAAAGGAAGAAGGCAGAAGAAAGAGAAGCTGGTCTGGCTGCCTTGAGGGCAGAGAGGGCTAAGAATGATCGCATGAGTGGCCGTGAGCTGTTCATGGCTGATTCAAGTGTGTTCGTTGATGATGCTGAAGCATATGATGTATATGAAAGACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAGTTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGATGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCATTCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAGGCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTGCTTTAGAAACAAAAAAGGTGGAAGGTGGAGCATAGATGCAAGTGCAATTTGTTTCAACCAGACTGATCATCTATCCATGATTAGTGAATGATGCTCAGTGCTGTTATGACATGACAATTGATTTTTTGACGCATCTGCCCTTTATATTATCTTTGCGGGAGTTACGTTGCTACTTGTGAATAACATGACTACTTTTTGGCCTCGTGCACACTATAACCGATTTTTGATGTGAAACATTGCCATAAGT] [+] EMBL D43536 [ CGCCGAAGAAGGCAGCGCCATCGAAGGCGGACCTGGCCAAGAAGCAGAAGGTCGTGGAGGACAAGACGTTCGNGCTCAAGAACAAGAACAAGAGCAAGAACGTCCAGAAGTACGNCCAGTCCCTGCATCAGGCCGTCCAGCCCAATCCCGACCC ] [+] EMBL AK058413 [ GAAAGACAGGAAGAATCAGAGGCTAATGAAGAACCGAGCAATAAAAACCAGGATGAGGGGCCAAGTTCATCAACTTCTAATGGCAAGGAGGTGGAAGAGTCCGATGATGAAGATATAAATATTGATGATGACCTGGACATTGATGAGTTAAACGAGCTTGAAGCAAGCCTGTCAAGAACTTCCATTCAGATTCGAGAACCTGGCGAGGGAACATCATCTTGAGCAGTAACACTCTGGACTGGAAGGCCATTGAGAAGTAGAACACCATTTTTGCGCCTTAAATTGCCTACTTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||