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Oryza sativa
cluster # 7178 cluster # 7178       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7178#0 length = 2085 sequences # 3  
consensus_7178#1 length = 783 sequences # 1  

consensusID : consensus_7178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2085
fasta sequence
                              [CAGTCGACCTGGTCTCACTCCTGCGGCGGCGGCAGCGGCGCTGTCGATTCACCGGCGACGGAGCTGCGACAGCCAACGAGATTGGATTGTCTAGGGTTTGGATTTTGGGGGTTATGGCTCCATCTGAGTGCCCGCCGGGGTGCAAATAAATGCAGGAAAGCATGATTGTTCCTCTACTAGCAGGGTTCTTGGAAGAATGGCATCACAAGCTTGGGTAGCAGATAGAGCTGCTGCAATTATGAGGAAGAAGCCAAATTGTGGGGCCAAGGAGCTAAAGACCATATTAGAGGAGCGGTACAAGGCTGAGATAGAGTTGAGGTGTCCTGGCAGTCGAGTTGAAATTGGTACCAAGGAAGTAAATGGTCAAGTTCACTTTGAGAGGTTCTTTTGTTGCTTTGAGCCTTGCATCACAGGTTTCTTGTTAGGATGCAGAAAATACCTTAGCATTGATTCTACGGCCCTCAATGGGAAGTGGAATGGCCACTTGGCAGCATCAAATGCCTTAGATGGGCATAATTGGATGTACCCAATGGCATTTGGGTTCTTTGATGCAGAAACCACTGATAACTGGACTTGGTTCATGGAGCAACTTGCAGTGTGTATTGGACATGTGGAAGACCTGGCAATATGTACAGATGCTTGCAAGGGCCTAGAAAATGTAGTTGAGAGGGTTTTTCCTAACTGTGAGGAGAGGGAGTGCTTTAGGCACTTGATGGAAAACTTGACAAAGAGGAAAACTGGTACAGTTTATGGTAACTTGTGGCCAGCTGCTAGAGCTTTTAGGTCTGAGATCTATGACTATCACATGGATAAGGTTTTATCAGCTGATCCTGATGTTGGTGATTGGTTATACAAACATCATAAAATTCTGTGGGCAAGGAGCAAGTTCTCACCAAAGATCAAATGTGACTTCATCACTAATAATGTGGCTGAGTCATGGAATGCATGGATCAAAGAATTCAAGGAACTGCAAGTTGATGCCCTAGCAGATGCAATCAGAGAGAAGACAGCAGCCTTGTGGGCTAAGAGAAGGAAGATTGGAGAAAAACTAGAAGGCAGAAACATTTTACCTGCAATTGTCACACAACTAAAGGCAGCAACTAGAGGTTTAGCCAACATGAGAGTCATGAAGGGAGCGGATGATACAGCTGAAGTGACTGAGCTCCATAATAGTGTTGAAGTCTATAGGCATGTTGTGTATCTTGACCAACAGAAATGCACATGTAGGGAGTGGCAGTTAACAGGGAAGCCATTCTCTCATGCTCTTGCAGCTATCTCCAAACAAAGGAATCCAATCATGGATGATTTTGTTGATCCCGTTTTCTCTGTTAGTTGCTTTAGGGCTGCATATGAAGGTGTCATCCCCTGCATAACTGACAAGTCCCAATGGCCAACAGCGAACAAAGATTTTAAGTTGCAGCCACCAGTGCCCAAGCCTAGAACTGTTCCTAGGCAAAGGAAAAACATGATTCCTTCTTGTCTTGAGAAGGGGAAAGGAAAGATCAGAAGGCAGGTGAAATGCCCAAGATGTGGTGGGCTAGGGCATAGACAGAGCAGCCAAAAGTGTCCTCTTAATGGGACCAAAAAGAGGAAGAGGAAGGCAAAGAATATTGCTACAAAAGCTAGGAAAAAGAAAACTGCTAAGGAAATTGTTGAAACTCCAACAAGATCAAAGGTTGCTAGAGTTCAATTAGTTGATAGCCCTGCTCGAGTCACTAGGAGTCAAACAAGGACAACTGGAACACCAACTATTGCTAGAGAAGGATGCTCACAAGATTCACCTGGACCAGTGACAAGGAGGCGCTTGGCTATGACTGAAGCAACACCATCACAGCCACTACCACCAACCAAGAAGAAATTGACTCCAAAGAAAAAACAGAACTGATGTTGCCTTTTTGCTTTTGTTACATGAAACTGGACTCAAGAAAGATGGGGTTATTTATGTATTTAATGGCAGCAAAGACCAATGTTAAGGCCAGCCATGCTTGCTACTAGACGTGCTATGTAGAAATGCAGAAAACAATATTTGAAGCCTATACTATTTTAGTTCTAAGAAATGTTCCGTTGAATTGCGTTATATACTTG]

[+] EMBL AK100632             [CAGTCGACCTGGTCTCACTCCTGCGGCGGCGGCAGCGGCGCTGTCGATTCACCGGCGACGGAGCTGCGACAGCCAACGAGATTGGATTGTCTAGGGTTTGGATTTTGGGGGTTATGGCTCCATCTGAGTGCCCGCCGGGGTGCAAATAAATGCAGGAAAGCATGATTGTTCCTCTACTAGCAGGGTTCTTGGAAGAATGGCATCACAAGCTTGGGTAGCAGATAGAGCTGCTGCAATTATGAGGAAGAAGCCAAATTGTGGGGCCAAGGAGCTAAAGACCATATTAGAGGAGCGGTACAAGGCTGAGATAGAGTTGAGGTGTCCTGGCAGTCGAGTTGAAATTGGTACCAAGGAAGTAAATGGTCAAGTTCACTTTGAGAGGTTCTTTTGTTGCTTTGAGCCTTGCATCACAGGTTTCTTGTTAGGATGCAGAAAATACCTTAGCATTGATTCTACGGCCCTCAATGGGAAGTGGAATGGCCACTTGGCAGCATCAAATGCCTTAGATGGGCATAATTGGATGTACCCAATGGCATTTGGGTTCTTTGATGCAGAAACCACTGATAACTGGACTTGGTTCATGGAGCAACTTGCAGTGTGTATTGGACATGTGGAAGACCTGGCAATATGTACAGATGCTTGCAAGGGCCTAGAAAATGTAGTTGAGAGGGTTTTTCCTAACTGTGAGGAGAGGGAGTGCTTTAGGCACTTGATGGAAAACTTGACAAAGAGGAAAACTGGTACAGTTTATGGTAACTTGTGGCCAGCTGCTAGAGCTTTTAGGTCTGAGATCTATGACTATCACATGGATAAGGTTTTATCAGCTGATCCTGATGTTGGTGATTGGTTATACAAACATCATAAAATTCTGTGGGCAAGGAGCAAGTTCTCACCAAAGATCAAATGTGACTTCATCACTAATAATGTGGCTGAGTCATGGAATGCATGGATCAAAGAATTCAAGGAACTGCAAGTTGATGCCCTAGCAGATGCAATCAGAGAGAAGACAGCAGCCTTGTGGGCTAAGAGAAGGAAGATTGGAGAAAAACTAGAAGGCAGAAACATTTTACCTGCAATTGTCACACAACTAAAGGCAGCAACTAGAGGTTTAGCCAACATGAGAGTCATGAAGGGAGCGGATGATACAGCTGAAGTGACTGAGCTCCATAATAGTGTTGAAGTCTATAGGCATGTTGTGTATCTTGACCAACAGAAATGCACATGTAGGGAGTGGCAGTTAACAGGGAAGCCATTCTCTCATGCTCTTGCAGCTATCTCCAAACAAAGGAATCCAATCATGGATGATTTTGTTGATCCCGTTTTCTCTGTTAGTTGCTTTAGGGCTGCATATGAAGGTGTCATCCCCTGCATAACTGACAAGTCCCAATGGCCAACAGCGAACAAAGATTTTAAGTTGCAGCCACCAGTGCCCAAGCCTAGAACTGTTCCTAGGCAAAGGAAAAACATGATTCCTTCTTGTCTTGAGAAGGGGAAAGGAAAGATCAGAAGGCAGGTGAAATGCCCAAGATGTGGTGGGCTAGGGCATAGACAGAGCAGCCAAAAGTGTCCTCTTAATGGGACCAAAAAGAGGAAGAGGAAGGCAAAGAATATTGCTACAAAAGCTAGGAAAAAGAAAACTGCTAAGGAAATTGTTGAAACTCCAACAAGATCAAAGGTTGCTAGAGTTCAATTAGTTGATAGCCCTGCTCGAGTCACTAGGAGTCAAACAAGGACAACTGGAACACCAACTATTGCTAGAGAAGGATGCTCACAAGATTCACCTGGACCAGTGACAAGGAGGCGCTTGGCTATGACTGAAGCAACACCATCACAGCCACTACCACCAACCAAGAAGAAATTGACTCCAAAGAAAAAACAGAACTGATGTTGCCTTTTTGCTTTTGTTACATGAAACTGGACTCAAGAAAGATGGGGTTATTTATGTATTTAATGGCAGCAAAGACCAATGTTAAGGCCAGCCATGCTTGCTACTAGACGTGCTATGTAGAAATGCAGAAAACAATATTTGAAGCCTATACTATTTTAGTTCTAAGAAATGTTCCGTTGAATTGCGTTATATACTTG]
[+] EMBL AB012392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTTAGCCAACATGAGAGTCATGAAGGGAGCGGATGATACAGCTGAAGTGACTGAGCTCCATAATAGTGTTGAAGTCTATAGGCATGTTGTGTATCTTGACCAACAGAAATGCACATGTAGGGAGTGGCAGTTAACAGGGAAGCCATTCTCTCATGCTCTTGCAGCTATCTCCAAACAAAGGAATCCAATCATGGATGATTTTGTTGATCCCGTTTTCTCTGTTAGTTGCTTTAGGGCTGCATATGAAGGTGTCATCCCCTGCATAACTGACAAGTCCCAATGGCCAACAGCGAACAAAGATTTTAAGTTGCAGCCACCAGTGCCCAAGCCTAGAACTGTTCCTAGGCAAAGGAAAAACATGATTCCTTCTTGTCTGGAGAAGGGGAAAGGAAAGATCAGAAGGCAGGTGAATTGCCCAAGATGTGGTGGGCTAGGGCATAGACAGAGCAGGCAAAAGTGTCCTCTTAATGGGACCAAAAAGAGGAAGAGGAAGGCAAAGAATATTGCTACAAAAGCTAGGAAAAAGAAAACTGCTAAGGAAATTGTTGAAACTCCAACAAGATCAAAGGTTGCTAGAGTTCAATTAGTTGATAGCCCTGCTCGAGTCACTAGGAGTCAAACAAGGACAACTGGAACACCAACTATTGCTAGAGAAGGATGCTCACAAGATTCACCTGGACCAGTGACAAGGAGGCGCTTGGCTATGACTGAAGCAACACCATCACAGCCACTACCACCAACCAAGAAGAAATTGACTCCAAAGAAAAAACAGAACTGATGTTGCCTTTTTGCTTTTGTTACATGAAACTGGACTCAAGAAAGATGGGGTTATTTATGTATTTAATGGCACCAAAGACCAATGTTAAGGCCAACCATGCTTGCTACTAGACGTGCTATGTAGAAATGCAGAAAACAATATTTGAAGCCTATACTATTTTAGTTCTAAGAAATGTTCCGTTGAATTGCGTTA        ]
[-] EMBL CB672094             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GATGATTTTGTTGATCCCGTTTTCTCTGTTAGTTGCTNTAGGGCTGCATATGAAGGTGTCATCCCCTGCATAACTGACAAGTCCCAATGGCCAACAGCGAACAAAGATTTTAAGTTGCAGCCACCAGTGCCCAAGCCTAGAACTGTTCCTAGGCAAAGGAAAAACATGATTCCTTCTTGTCTTGAGAAGGGGAAAGGAAAGATCAGAAGGCAGGTGAAATGCCCAAGATGTGGTGGGCTAGGGCATAGACAGAGCAGCCAAAAGTGTCCTCTTAATGGGACCAAAAAGAGGAAGAGGAAGGCAAAGAATATTGCTACAAAAGCTAGGAAAAAGAAAACTGCTAAGGAAATTGTTGAAACTCCAACAAGATCAAAGGTTGCTAGAGTTCAATTAGTTGATAGCCCTGCTCGAGTCACTAGGAGTCAAACAAGGACAACTGGAACACCAACTATTGCTAGAGAAGGATGCTCACAAGATTCACCTGGACCAGTGACAAGGAGGCGCTTGGCTATGACTGAAGCAACACCATCACAGCCACTACCACCAACCAAGAAGAAATTGACTCCAAAGAAAAAACAGAACTGATGTTGCCTTTTTGCTTTTGTTACATGAAACTGGACTCAAGAAAGATGGGGTTATTTATGTATTTAATGGCAGCAAAGACCAATGTTAAGGCCAGCCATGCTTGCTACTAGACGTGCTATGTAGAAATGCAGAAAACAATATTTGAAGCCTATACTATTTTAGTTCTAAGAAATGTTCCGTTGAAaaaaaaga        ]


>consensus_7178#0 CAGTCGACCTGGTCTCACTCCTGCGGCGGCGGCAGCGGCGCTGTCGATTCACCGGCGACG GAGCTGCGACAGCCAACGAGATTGGATTGTCTAGGGTTTGGATTTTGGGGGTTATGGCTC CATCTGAGTGCCCGCCGGGGTGCAAATAAATGCAGGAAAGCATGATTGTTCCTCTACTAG CAGGGTTCTTGGAAGAATGGCATCACAAGCTTGGGTAGCAGATAGAGCTGCTGCAATTAT GAGGAAGAAGCCAAATTGTGGGGCCAAGGAGCTAAAGACCATATTAGAGGAGCGGTACAA GGCTGAGATAGAGTTGAGGTGTCCTGGCAGTCGAGTTGAAATTGGTACCAAGGAAGTAAA TGGTCAAGTTCACTTTGAGAGGTTCTTTTGTTGCTTTGAGCCTTGCATCACAGGTTTCTT GTTAGGATGCAGAAAATACCTTAGCATTGATTCTACGGCCCTCAATGGGAAGTGGAATGG CCACTTGGCAGCATCAAATGCCTTAGATGGGCATAATTGGATGTACCCAATGGCATTTGG GTTCTTTGATGCAGAAACCACTGATAACTGGACTTGGTTCATGGAGCAACTTGCAGTGTG TATTGGACATGTGGAAGACCTGGCAATATGTACAGATGCTTGCAAGGGCCTAGAAAATGT AGTTGAGAGGGTTTTTCCTAACTGTGAGGAGAGGGAGTGCTTTAGGCACTTGATGGAAAA CTTGACAAAGAGGAAAACTGGTACAGTTTATGGTAACTTGTGGCCAGCTGCTAGAGCTTT TAGGTCTGAGATCTATGACTATCACATGGATAAGGTTTTATCAGCTGATCCTGATGTTGG TGATTGGTTATACAAACATCATAAAATTCTGTGGGCAAGGAGCAAGTTCTCACCAAAGAT CAAATGTGACTTCATCACTAATAATGTGGCTGAGTCATGGAATGCATGGATCAAAGAATT CAAGGAACTGCAAGTTGATGCCCTAGCAGATGCAATCAGAGAGAAGACAGCAGCCTTGTG GGCTAAGAGAAGGAAGATTGGAGAAAAACTAGAAGGCAGAAACATTTTACCTGCAATTGT CACACAACTAAAGGCAGCAACTAGAGGTTTAGCCAACATGAGAGTCATGAAGGGAGCGGA TGATACAGCTGAAGTGACTGAGCTCCATAATAGTGTTGAAGTCTATAGGCATGTTGTGTA TCTTGACCAACAGAAATGCACATGTAGGGAGTGGCAGTTAACAGGGAAGCCATTCTCTCA TGCTCTTGCAGCTATCTCCAAACAAAGGAATCCAATCATGGATGATTTTGTTGATCCCGT TTTCTCTGTTAGTTGCTTTAGGGCTGCATATGAAGGTGTCATCCCCTGCATAACTGACAA GTCCCAATGGCCAACAGCGAACAAAGATTTTAAGTTGCAGCCACCAGTGCCCAAGCCTAG AACTGTTCCTAGGCAAAGGAAAAACATGATTCCTTCTTGTCTTGAGAAGGGGAAAGGAAA GATCAGAAGGCAGGTGAAATGCCCAAGATGTGGTGGGCTAGGGCATAGACAGAGCAGCCA AAAGTGTCCTCTTAATGGGACCAAAAAGAGGAAGAGGAAGGCAAAGAATATTGCTACAAA AGCTAGGAAAAAGAAAACTGCTAAGGAAATTGTTGAAACTCCAACAAGATCAAAGGTTGC TAGAGTTCAATTAGTTGATAGCCCTGCTCGAGTCACTAGGAGTCAAACAAGGACAACTGG AACACCAACTATTGCTAGAGAAGGATGCTCACAAGATTCACCTGGACCAGTGACAAGGAG GCGCTTGGCTATGACTGAAGCAACACCATCACAGCCACTACCACCAACCAAGAAGAAATT GACTCCAAAGAAAAAACAGAACTGATGTTGCCTTTTTGCTTTTGTTACATGAAACTGGAC TCAAGAAAGATGGGGTTATTTATGTATTTAATGGCAGCAAAGACCAATGTTAAGGCCAGC CATGCTTGCTACTAGACGTGCTATGTAGAAATGCAGAAAACAATATTTGAAGCCTATACT ATTTTAGTTCTAAGAAATGTTCCGTTGAATTGCGTTATATACTTG



consensusID : consensus_7178#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 783
fasta sequence
                              [GTCTCACTCCTGCGGCGGCGGCAGCGGCGCTGTCGATTCACCGGCGACGGAGCTGCGACAGCCAACGAGATTGGATTGTCTAGGGTTTGGATTTTGGGGGTTATGGCTCCATCTGAGTGCCCGCCGGGGTGCAAATAAATGCAGGAAAGCATGATTGTTCCTCTACTAGCAGGGTTCTTGGAAGAATGGCATCACAAGCTTGGGTAGCAGATAGAGCTGCTGCAATTATGAGGAAGAAGCCAAATTGTGGGGCCAAGGAGCTAAAGACCATATTAGAGGAGCGGTACAAGGTACAGATTCCTTACTCCACTGTTTGGAAGGGTAAAGAGAGGGCCATACAAAAGATTTGGGAGTTCATGGGATGATAGCTTTGATTCCTTGTATAACTTTAAGGCTGAGATAGAGTTGAGGTGTCCTGGCAGTCGAGTTGAAATTGGTACCAAGGAAGTAAATGGTCAAGTTCACTTTGAGAGGTTCTTTTGTTGCTTTGAGCCTTGCATCACAGGTTTCTTGTTAGGATGCAGAAAATACCTTAGCATTGATTCTACGGCCCTCAATGGGAAGTGGAATGGCCACTTGGCAGCATCAAATGCCTTAGATGGGCATAATTGGATGTACCCAATGGCATTTGGGTTCTTTGATGCAGAAACCACTGATAACTGGACTTGGTTCATGGAGCAACTTGCAGTGTGTATTGGACATGTGGAAGACCTGGCAATATGTACAGATGCTGCAAGGGCCTAGAAAATGTAGTTGAGAGGGTTTTTCCTAACTGTGAGGAGA]

[+] EMBL CB672093             [GTCTCACTCCTGCGGCGGCGGCAGCGGCGCTGTCGATTCACCGGCGACGGAGCTGCGACAGCCAACGAGATTGGATTGTCTAGGGTTTGGATTTTGGGGGTTATGGCTCCATCTGAGTGCCCGCCGGGGTGCAAATAAATGCAGGAAAGCATGATTGTTCCTCTACTAGCAGGGTTCTTGGAAGAATGGCATCACAAGCTTGGGTAGCAGATAGAGCTGCTGCAATTATGAGGAAGAAGCCAAATTGTGGGGCCAAGGAGCTAAAGACCATATTAGAGGAGCGGTACAAGGTACAGATTCCTTACTCCACTGTTTGGAAGGGTAAAGAGAGGGCCATACAAAAGATTTGGGAGTTCATGGGATGATAGCTTTGATTCCTTGTATAACTTTAAGGCTGAGATAGAGTTGAGGTGTCCTGGCAGTCGAGTTGAAATTGGTACCAAGGAAGTAAATGGTCAAGTTCACTTTGAGAGGTTCTTTTGTTGCTTTGAGCCTTGCATCACAGGTTTCTTGTTAGGATGCAGAAAATACCTTAGCATTGATTCTACGGCCCTCAATGGGAAGTGGAATGGCCACTTGGCAGCATCAAATGCCTTAGATGGGCATAATTGGATGTACCCAATGGCATTTGGGTTCTTTGATGCAGAAACCACTGATAACTGGACTTGGTTCATGGAGCAACTTGCAGTGTGTATTGGACATGTGGAAGACCTGGCAATATGTACAGATGCTGCAAGGGCCTAGAAAATGTAGTTGAGAGGGTTTTTCCTAACTGTGAGGAGA]


>consensus_7178#1 GTCTCACTCCTGCGGCGGCGGCAGCGGCGCTGTCGATTCACCGGCGACGGAGCTGCGACA GCCAACGAGATTGGATTGTCTAGGGTTTGGATTTTGGGGGTTATGGCTCCATCTGAGTGC CCGCCGGGGTGCAAATAAATGCAGGAAAGCATGATTGTTCCTCTACTAGCAGGGTTCTTG GAAGAATGGCATCACAAGCTTGGGTAGCAGATAGAGCTGCTGCAATTATGAGGAAGAAGC CAAATTGTGGGGCCAAGGAGCTAAAGACCATATTAGAGGAGCGGTACAAGGTACAGATTC CTTACTCCACTGTTTGGAAGGGTAAAGAGAGGGCCATACAAAAGATTTGGGAGTTCATGG GATGATAGCTTTGATTCCTTGTATAACTTTAAGGCTGAGATAGAGTTGAGGTGTCCTGGC AGTCGAGTTGAAATTGGTACCAAGGAAGTAAATGGTCAAGTTCACTTTGAGAGGTTCTTT TGTTGCTTTGAGCCTTGCATCACAGGTTTCTTGTTAGGATGCAGAAAATACCTTAGCATT GATTCTACGGCCCTCAATGGGAAGTGGAATGGCCACTTGGCAGCATCAAATGCCTTAGAT GGGCATAATTGGATGTACCCAATGGCATTTGGGTTCTTTGATGCAGAAACCACTGATAAC TGGACTTGGTTCATGGAGCAACTTGCAGTGTGTATTGGACATGTGGAAGACCTGGCAATA TGTACAGATGCTGCAAGGGCCTAGAAAATGTAGTTGAGAGGGTTTTTCCTAACTGTGAGG AGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7178#0      CAGTCGACCTGGTCTCACTCCTGCGGCGGCGGCAGCGGCGCTGTCGATTCACCGGCGACG 60
consensus_7178#1      -----------GTCTCACTCCTGCGGCGGCGGCAGCGGCGCTGTCGATTCACCGGCGACG 49
                                 *************************************************

consensus_7178#0      GAGCTGCGACAGCCAACGAGATTGGATTGTCTAGGGTTTGGATTTTGGGGGTTATGGCTC 120
consensus_7178#1      GAGCTGCGACAGCCAACGAGATTGGATTGTCTAGGGTTTGGATTTTGGGGGTTATGGCTC 109
                      ************************************************************

consensus_7178#0      CATCTGAGTGCCCGCCGGGGTGCAAATAAATGCAGGAAAGCATGATTGTTCCTCTACTAG 180
consensus_7178#1      CATCTGAGTGCCCGCCGGGGTGCAAATAAATGCAGGAAAGCATGATTGTTCCTCTACTAG 169
                      ************************************************************

consensus_7178#0      CAGGGTTCTTGGAAGAATGGCATCACAAGCTTGGGTAGCAGATAGAGCTGCTGCAATTAT 240
consensus_7178#1      CAGGGTTCTTGGAAGAATGGCATCACAAGCTTGGGTAGCAGATAGAGCTGCTGCAATTAT 229
                      ************************************************************

consensus_7178#0      GAGGAAGAAGCCAAATTGTGGGGCCAAGGAGCTAAAGACCATATTAGAGGAGCGGTACAA 300
consensus_7178#1      GAGGAAGAAGCCAAATTGTGGGGCCAAGGAGCTAAAGACCATATTAGAGGAGCGGTACAA 289
                      ************************************************************

consensus_7178#0      GG---------------------------------------------------------- 302
consensus_7178#1      GGTACAGATTCCTTACTCCACTGTTTGGAAGGGTAAAGAGAGGGCCATACAAAAGATTTG 349
                      **                                                          

consensus_7178#0      ---------------------------------------------CTGAGATAGAGTTGA 317
consensus_7178#1      GGAGTTCATGGGATGATAGCTTTGATTCCTTGTATAACTTTAAGGCTGAGATAGAGTTGA 409
                                                                   ***************

consensus_7178#0      GGTGTCCTGGCAGTCGAGTTGAAATTGGTACCAAGGAAGTAAATGGTCAAGTTCACTTTG 377
consensus_7178#1      GGTGTCCTGGCAGTCGAGTTGAAATTGGTACCAAGGAAGTAAATGGTCAAGTTCACTTTG 469
                      ************************************************************

consensus_7178#0      AGAGGTTCTTTTGTTGCTTTGAGCCTTGCATCACAGGTTTCTTGTTAGGATGCAGAAAAT 437
consensus_7178#1      AGAGGTTCTTTTGTTGCTTTGAGCCTTGCATCACAGGTTTCTTGTTAGGATGCAGAAAAT 529
                      ************************************************************

consensus_7178#0      ACCTTAGCATTGATTCTACGGCCCTCAATGGGAAGTGGAATGGCCACTTGGCAGCATCAA 497
consensus_7178#1      ACCTTAGCATTGATTCTACGGCCCTCAATGGGAAGTGGAATGGCCACTTGGCAGCATCAA 589
                      ************************************************************

consensus_7178#0      ATGCCTTAGATGGGCATAATTGGATGTACCCAATGGCATTTGGGTTCTTTGATGCAGAAA 557
consensus_7178#1      ATGCCTTAGATGGGCATAATTGGATGTACCCAATGGCATTTGGGTTCTTTGATGCAGAAA 649
                      ************************************************************

consensus_7178#0      CCACTGATAACTGGACTTGGTTCATGGAGCAACTTGCAGTGTGTATTGGACATGTGGAAG 617
consensus_7178#1      CCACTGATAACTGGACTTGGTTCATGGAGCAACTTGCAGTGTGTATTGGACATGTGGAAG 709
                      ************************************************************

consensus_7178#0      ACCTGGCAATATGTACAGATGCTTGCAAGGGCCTAGAAAATGTAGTTGAGAGGGTTTTTC 677
consensus_7178#1      ACCTGGCAATATGTACAGATGCT-GCAAGGGCCTAGAAAATGTAGTTGAGAGGGTTTTTC 768
                      *********************** ************************************

consensus_7178#0      CTAACTGTGAGGAGAGGGAGTGCTTTAGGCACTTGATGGAAAACTTGACAAAGAGGAAAA 737
consensus_7178#1      CTAACTGTGAGGAGA--------------------------------------------- 783
                      ***************                                             

consensus_7178#0      CTGGTACAGTTTATGGTAACTTGTGGCCAGCTGCTAGAGCTTTTAGGTCTGAGATCTATG 797
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      ACTATCACATGGATAAGGTTTTATCAGCTGATCCTGATGTTGGTGATTGGTTATACAAAC 857
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      ATCATAAAATTCTGTGGGCAAGGAGCAAGTTCTCACCAAAGATCAAATGTGACTTCATCA 917
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      CTAATAATGTGGCTGAGTCATGGAATGCATGGATCAAAGAATTCAAGGAACTGCAAGTTG 977
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      ATGCCCTAGCAGATGCAATCAGAGAGAAGACAGCAGCCTTGTGGGCTAAGAGAAGGAAGA 1037
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      TTGGAGAAAAACTAGAAGGCAGAAACATTTTACCTGCAATTGTCACACAACTAAAGGCAG 1097
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      CAACTAGAGGTTTAGCCAACATGAGAGTCATGAAGGGAGCGGATGATACAGCTGAAGTGA 1157
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      CTGAGCTCCATAATAGTGTTGAAGTCTATAGGCATGTTGTGTATCTTGACCAACAGAAAT 1217
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      GCACATGTAGGGAGTGGCAGTTAACAGGGAAGCCATTCTCTCATGCTCTTGCAGCTATCT 1277
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      CCAAACAAAGGAATCCAATCATGGATGATTTTGTTGATCCCGTTTTCTCTGTTAGTTGCT 1337
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      TTAGGGCTGCATATGAAGGTGTCATCCCCTGCATAACTGACAAGTCCCAATGGCCAACAG 1397
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      CGAACAAAGATTTTAAGTTGCAGCCACCAGTGCCCAAGCCTAGAACTGTTCCTAGGCAAA 1457
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      GGAAAAACATGATTCCTTCTTGTCTTGAGAAGGGGAAAGGAAAGATCAGAAGGCAGGTGA 1517
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      AATGCCCAAGATGTGGTGGGCTAGGGCATAGACAGAGCAGCCAAAAGTGTCCTCTTAATG 1577
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      GGACCAAAAAGAGGAAGAGGAAGGCAAAGAATATTGCTACAAAAGCTAGGAAAAAGAAAA 1637
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      CTGCTAAGGAAATTGTTGAAACTCCAACAAGATCAAAGGTTGCTAGAGTTCAATTAGTTG 1697
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      ATAGCCCTGCTCGAGTCACTAGGAGTCAAACAAGGACAACTGGAACACCAACTATTGCTA 1757
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      GAGAAGGATGCTCACAAGATTCACCTGGACCAGTGACAAGGAGGCGCTTGGCTATGACTG 1817
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      AAGCAACACCATCACAGCCACTACCACCAACCAAGAAGAAATTGACTCCAAAGAAAAAAC 1877
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      AGAACTGATGTTGCCTTTTTGCTTTTGTTACATGAAACTGGACTCAAGAAAGATGGGGTT 1937
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      ATTTATGTATTTAATGGCAGCAAAGACCAATGTTAAGGCCAGCCATGCTTGCTACTAGAC 1997
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      GTGCTATGTAGAAATGCAGAAAACAATATTTGAAGCCTATACTATTTTAGTTCTAAGAAA 2057
consensus_7178#1      ------------------------------------------------------------
                                                                                  

consensus_7178#0      TGTTCCGTTGAATTGCGTTATATACTTG 2085
consensus_7178#1      ----------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)