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Oryza sativa
cluster # 7185 cluster # 7185       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7185#0 length = 2341 sequences # 2  
consensus_7185#1 length = 662 sequences # 1  
consensus_7185#2 length = 620 sequences # 1  

consensusID : consensus_7185#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2341
fasta sequence
                              [TCCCCCCCAAATCCGCCGCCTCCCCAAAATCACGCGAGGCGCCGGCGAATCCGCCTCCACCTCCGCCGCCCGCCGCCCGCCGCCCGCCGCCGACCTCTCCTTCTCCTGCTTCCGCTTCCGCCGACGCTGTCAATCTGATGGGGTTGGAGGAAAGCCAAAAGCATCTCCTTGGCCTTAATTACCATGAGCTCCAATCTTTGTGCAAACAGTATAATCTTCCTGCAAACAAGAGTCACTCTCAGCTAGCAAGCTCGCTTGCCTTGTTTCTTGAGAAGGGAAGAATAAATCCATCGCCTGAAAAGAAAGCAGCAGCATCCCTTGTTGCCTTGCCCTCCTTGTTATCAAATGCCAAAGAAGTATCCACCCGTTGCCAAGGTAGCCATAAAAGAGGTCCGCAAAGTGAAAGAGATGATGGTGATAGACCTCTTCTGCATGTAAAACATCACAAAGGACCTCAAACACCAACAGATGAAACATTGAAAAAAAATGACTCTGGAACCAGAGTGAGTTCTACACCAGTTTCAATCAACAATGGAAAAGTAGACTGCTTTAGCCACTCACCTCCTCGTCAAGTGATTGCTTCTAATGTACATTCACAAAGTGCTGATGGTATTGGAAAGAACTTGGGAACTCAAGAGCATCCAATTCATCTTGATTCAACTGCTAAGGTAGATGATGAAATTTCTCCGGAAACAAGCTACCAGGCACCTAATGTTGTTGAAACAGTTACAGATATTGGTAGTGGCTCATCTCATAAGATCTCAGAAAATGCAAAGTCTTCGTTTGAATTTTTTGTCATGTCAGATGAGGGACTTGATCTTGTTGTTGATCTGAATTCCACTCCATCAATGTTACTTGATAGCTTGAAGAAGGAAGTGTTCATCCCCTCAAGTACCTGTCGTTCTGAACCTGGAAATTTCTCTCATTTTATCAGTAGCCTGACGACAAAAGATGACAGCAACAACTCCATTTCTTCATCTGGGAATATTACTGTGGACATACAAAATAAGGGAGATGACAGCATTGCTCCTTGCACCAATTCATCACTAGGCTCAACCGGTGGTGACAATTCTCACTCAGAGCCCTATCTGCCTGATGCAACTGCTGTAAACTCTATGTCATTTGCATCCACATTACCTGGTACTTCACTAGAAATTTCTGGATCACAGGAGGGAGTTCCAGTCGTATCTTCTTCATGCTTAACCTCTATGACTGCTAATGCTTTGAATAATGAAGTGCTTCCTCAAGAATCTGTTGTGCTCTCAAAGTGTCCGGAAAGAAACCATGCTCCCCTTGCTTATGATTCCACACATCCAACTGGTAACAAAGACACAGTCAATCCTGTCAAAATCGGTTGCACTCAAAATGTTGTTGCTGATACTGATAGAGCTGGAGCATTCTCCTCAGGGGGTGTGGTTAGAAGTGCCTCCAATGAAAACTTCTGCCCAACTTCTGAAGAAAAACATGAAACGTTAAATGTTCCTGGAGCGCAGCTTACCCCCAACGGTAATACCCATGAAGTTATATTGGAAAATGAACCAGTGGAAGCAGTGCCAGTGGATGAAGATAGAGGTTGTCATGACAGGCTGTCAATGTCTTGTCAACTAGCCAGACAAACAGTAACTAAACTGCCAGTTACAGATGCCCAGTCAGAAGCTAGTTCTGCAGATCATTGTATTGCCGGAAGCTTCAAACCCACAAGCCCAACGCCATCACCTGCTGCTTCGTAAAGGGGAAGAAAGAAGGAAAGCTGGTAAATATATTATTCTGGTCTAACTGTGGTCAAGTCTACATGTCCAAATCTTAGATCTGCAGCTGCAAACCTGCATATTTGGGCAATGCTTTTAGCTCCAAGCATGATGCAGAGTCAGCACAGAGTTCTGATGAGCTTGAGGAGTTAGAGAGCAAGACACCATCAAGTTTTGAACCTCCCAGAAACATACTACTTAGCTTAAGAAGTGCTTCTGCTAAACAGACCAAACCAACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCAAGGAGAGATACATGGCAAAGAATCAATAGCTTAACTGCCATCTTAGTCAGGTTCTAAGAGGAGGCTGAAGGATAGAAATACCATTGTTAGCAAGCTAGTTTCCAAACTTGTCTTGTTCTGGTTCGTTGATTCTTTATTGGTAGCAGCTGAGTAGCTTAGTTCTATACACCAGTACACAGTCACCGAGCACCAAACGTTTTCTTCTTTTTCTTCTTCTGTTGTAGTACATCTGTTATACCTGGATGCAATGCTGAGCCCTTTACACCGTGTACAAACAATTCATAGTTTTCGGATAGCTCTGAAC]

[+] EMBL AK106676             [TCCCCCCCAAATCCGCCGCCTCCCCAAAATCACGCGAGGCGCCGGCGAATCCGCCTCCACCTCCGCCGCCCGCCGCCCGCCGCCCGCCGCCGACCTCTCCTTCTCCTGCTTCCGCTTCCGCCGACGCTGTCAATCTGATGGGGTTGGAGGAAAGCCAAAAGCATCTCCTTGGCCTTAATTACCATGAGCTCCAATCTTTGTGCAAACAGTATAATCTTCCTGCAAACAAGAGTCACTCTCAGCTAGCAAGCTCGCTTGCCTTGTTTCTTGAGAAGGGAAGAATAAATCCATCGCCTGAAAAGAAAGCAGCAGCATCCCTTGTTGCCTTGCCCTCCTTGTTATCAAATGCCAAAGAAGTATCCACCCGTTGCCAAGGTAGCCATAAAAGAGGTCCGCAAAGTGAAAGAGATGATGGTGATAGACCTCTTCTGCATGTAAAACATCACAAAGGACCTCAAACACCAACAGATGAAACATTGAAAAAAAATGACTCTGGAACCAGAGTGAGTTCTACACCAGTTTCAATCAACAATGGAAAAGTAGACTGCTTTAGCCACTCACCTCCTCGTCAAGTGATTGCTTCTAATGTACATTCACAAAGTGCTGATGGTATTGGAAAGAACTTGGGAACTCAAGAGCATCCAATTCATCTTGATTCAACTGCTAAGGTAGATGATGAAATTTCTCCGGAAACAAGCTACCAGGCACCTAATGTTGTTGAAACAGTTACAGATATTGGTAGTGGCTCATCTCATAAGATCTCAGAAAATGCAAAGTCTTCGTTTGAATTTTTTGTCATGTCAGATGAGGGACTTGATCTTGTTGTTGATCTGAATTCCACTCCATCAATGTTACTTGATAGCTTGAAGAAGGAAGTGTTCATCCCCTCAAGTACCTGTCGTTCTGAACCTGGAAATTTCTCTCATTTTATCAGTAGCCTGACGACAAAAGATGACAGCAACAACTCCATTTCTTCATCTGGGAATATTACTGTGGACATACAAAATAAGGGAGATGACAGCATTGCTCCTTGCACCAATTCATCACTAGGCTCAACCGGTGGTGACAATTCTCACTCAGAGCCCTATCTGCCTGATGCAACTGCTGTAAACTCTATGTCATTTGCATCCACATTACCTGGTACTTCACTAGAAATTTCTGGATCACAGGAGGGAGTTCCAGTCGTATCTTCTTCATGCTTAACCTCTATGACTGCTAATGCTTTGAATAATGAAGTGCTTCCTCAAGAATCTGTTGTGCTCTCAAAGTGTCCGGAAAGAAACCATGCTCCCCTTGCTTATGATTCCACACATCCAACTGGTAACAAAGACACAGTCAATCCTGTCAAAATCGGTTGCACTCAAAATGTTGTTGCTGATACTGATAGAGCTGGAGCATTCTCCTCAGGGGGTGTGGTTAGAAGTGCCTCCAATGAAAACTTCTGCCCAACTTCTGAAGAAAAACATGAAACGTTAAATGTTCCTGGAGCGCAGCTTACCCCCAACGGTAATACCCATGAAGTTATATTGGAAAATGAACCAGTGGAAGCAGTGCCAGTGGATGAAGATAGAGGTTGTCATGACAGGCTGTCAATGTCTTGTCAACTAGCCAGACAAACAGTAACTAAACTGCCAGTTACAGATGCCCAGTCAGAAGCTAGTTCTGCAGATCATTGTATTGCCGGAAGCTTCAAACCCACAAGCCCAACGCCATCACCTGCTGCTTCGTAAAGGGGAAGAAAGAAGGAAAGCTGGTAAATATATTATTCTGGTCTAACTGTGGTCAAGTCTACATGTCCAAATCTTAGATCTGCAGCTGCAAACCTGCATATTTGGGCAATGCTTTTAGCTCCAAGCATGATGCAGAGTCAGCACAGAGTTCTGATGAGCTTGAGGAGTTAGAGAGCAAGACACCATCAAGTTTTGAACCTCCCAGAAACATACTACTTAGCTTAAGAAGTGCTTCTGCTAAACAGACCAAACCAACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCAAGGAGAGATACATGGCAAAGAATCAATAGCTTAACTGCCATCTTAGTCAGGTTCTAAGAGGAGGCTGAAGGATAGAAATACCATTGTTAGCAAGCTAGTTTCCAAACTTGTCTTGTTCTGGTTCGTTGATTCTTTATTGGTAGCAGCTGAGTAGCTTAGTTCTATACACCAGTACACAGTCACCGAGCACCAAACGTTTTCTTCTTTTTCTTCTTCTGTTGTAGTACATCTGTTATACCTGGATGCAATGCTGAGCCCTTTACACCGTGTACAAACAATTCATAGTTTTCGGATAGCTCTGAAC]
[+] EMBL CF306578             [                                            GCGAATCCGCCTCCACCTCCGCCGCCCGCCGCCCGCCGCCCGCCGCCGACCTCTCCTTCTCCTGCTTCCGCTTCCGCCGACGCTGTCAATCTGATGGGGTTGGAGGAAAGCCAAAAGCATCTCCTTGGCCTTAATTACCATGAGCTCCAATCTTTGTGCAAACAGTATAATCTTCCTGCAAACAAGAGTCACTCTCAGCTAGCAAGCTCGCTTGCCTTGTTTCTTGAGAAGGGAAGAATAAATCCATCGCCTGAAAAGAAAGCAGCAGCATCCCTTGTTGCCTTGCCCTCCTTGTTATCAAATGCCAAAGAAGTATCCACCCGTTGCCAAGGTAGCCATAAAAGAGGTCCGCAAAGTGAAAGAGATGATGGTGATAGACCTCTTCTGCATGTAAAACATCACAAAGGACCTCAAACACCAACAGATGAAACATTGAAAAAAAATGACTCTGGAACCAGAGTGAGTTCTACACCAGTTTCAATCAACAATGGAAAAGTAGACTGCTNTAGCCACTCACCTCCTCGTCAAGTGATTGCTTCTAATGTACATTCACAAAGTGCTGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_7185#0 TCCCCCCCAAATCCGCCGCCTCCCCAAAATCACGCGAGGCGCCGGCGAATCCGCCTCCAC CTCCGCCGCCCGCCGCCCGCCGCCCGCCGCCGACCTCTCCTTCTCCTGCTTCCGCTTCCG CCGACGCTGTCAATCTGATGGGGTTGGAGGAAAGCCAAAAGCATCTCCTTGGCCTTAATT ACCATGAGCTCCAATCTTTGTGCAAACAGTATAATCTTCCTGCAAACAAGAGTCACTCTC AGCTAGCAAGCTCGCTTGCCTTGTTTCTTGAGAAGGGAAGAATAAATCCATCGCCTGAAA AGAAAGCAGCAGCATCCCTTGTTGCCTTGCCCTCCTTGTTATCAAATGCCAAAGAAGTAT CCACCCGTTGCCAAGGTAGCCATAAAAGAGGTCCGCAAAGTGAAAGAGATGATGGTGATA GACCTCTTCTGCATGTAAAACATCACAAAGGACCTCAAACACCAACAGATGAAACATTGA AAAAAAATGACTCTGGAACCAGAGTGAGTTCTACACCAGTTTCAATCAACAATGGAAAAG TAGACTGCTTTAGCCACTCACCTCCTCGTCAAGTGATTGCTTCTAATGTACATTCACAAA GTGCTGATGGTATTGGAAAGAACTTGGGAACTCAAGAGCATCCAATTCATCTTGATTCAA CTGCTAAGGTAGATGATGAAATTTCTCCGGAAACAAGCTACCAGGCACCTAATGTTGTTG AAACAGTTACAGATATTGGTAGTGGCTCATCTCATAAGATCTCAGAAAATGCAAAGTCTT CGTTTGAATTTTTTGTCATGTCAGATGAGGGACTTGATCTTGTTGTTGATCTGAATTCCA CTCCATCAATGTTACTTGATAGCTTGAAGAAGGAAGTGTTCATCCCCTCAAGTACCTGTC GTTCTGAACCTGGAAATTTCTCTCATTTTATCAGTAGCCTGACGACAAAAGATGACAGCA ACAACTCCATTTCTTCATCTGGGAATATTACTGTGGACATACAAAATAAGGGAGATGACA GCATTGCTCCTTGCACCAATTCATCACTAGGCTCAACCGGTGGTGACAATTCTCACTCAG AGCCCTATCTGCCTGATGCAACTGCTGTAAACTCTATGTCATTTGCATCCACATTACCTG GTACTTCACTAGAAATTTCTGGATCACAGGAGGGAGTTCCAGTCGTATCTTCTTCATGCT TAACCTCTATGACTGCTAATGCTTTGAATAATGAAGTGCTTCCTCAAGAATCTGTTGTGC TCTCAAAGTGTCCGGAAAGAAACCATGCTCCCCTTGCTTATGATTCCACACATCCAACTG GTAACAAAGACACAGTCAATCCTGTCAAAATCGGTTGCACTCAAAATGTTGTTGCTGATA CTGATAGAGCTGGAGCATTCTCCTCAGGGGGTGTGGTTAGAAGTGCCTCCAATGAAAACT TCTGCCCAACTTCTGAAGAAAAACATGAAACGTTAAATGTTCCTGGAGCGCAGCTTACCC CCAACGGTAATACCCATGAAGTTATATTGGAAAATGAACCAGTGGAAGCAGTGCCAGTGG ATGAAGATAGAGGTTGTCATGACAGGCTGTCAATGTCTTGTCAACTAGCCAGACAAACAG TAACTAAACTGCCAGTTACAGATGCCCAGTCAGAAGCTAGTTCTGCAGATCATTGTATTG CCGGAAGCTTCAAACCCACAAGCCCAACGCCATCACCTGCTGCTTCGTAAAGGGGAAGAA AGAAGGAAAGCTGGTAAATATATTATTCTGGTCTAACTGTGGTCAAGTCTACATGTCCAA ATCTTAGATCTGCAGCTGCAAACCTGCATATTTGGGCAATGCTTTTAGCTCCAAGCATGA TGCAGAGTCAGCACAGAGTTCTGATGAGCTTGAGGAGTTAGAGAGCAAGACACCATCAAG TTTTGAACCTCCCAGAAACATACTACTTAGCTTAAGAAGTGCTTCTGCTAAACAGACCAA ACCAACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCAAGG AGAGATACATGGCAAAGAATCAATAGCTTAACTGCCATCTTAGTCAGGTTCTAAGAGGAG GCTGAAGGATAGAAATACCATTGTTAGCAAGCTAGTTTCCAAACTTGTCTTGTTCTGGTT CGTTGATTCTTTATTGGTAGCAGCTGAGTAGCTTAGTTCTATACACCAGTACACAGTCAC CGAGCACCAAACGTTTTCTTCTTTTTCTTCTTCTGTTGTAGTACATCTGTTATACCTGGA TGCAATGCTGAGCCCTTTACACCGTGTACAAACAATTCATAGTTTTCGGATAGCTCTGAA C



consensusID : consensus_7185#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 662
fasta sequence
                              [CTGTGTTCTGAGTATGATGAAAACATCCCAANACTTTTTTTCCTATTCTGATAACATGCTGATCTTTTGTTTTTTGTTTTTCCCAGATCAAATTATTGACCTTTAACTTTCTTGTGCAGGGCAATGCTTTTAGCTCCAAGCATGATGCAGAGTCAGCACAGAGTTTTGATGAGCTTGAGGAGTTAGAGAGCAAGACCCCTATCAAGTTTTTGAACCTCCCAGAGAACATACTACTTAGCTTAAGAAGTGCTTTTGCTAAACAGACCAAACCAACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCAAGGGGAGATACATGGCAAAGAATCAATAGCTTAACTGCCATTTTAGTCAGGTTTTAAGAGGAGGCTGAAGGATAGAAATACCATTGTTAGCAAGCTAGTTTCCAAACTCGTCTTGTTCTGGTTCGTTGATTCTTTATTGGTAGCAGCTGAGTAGCTTAGTTCTATACACCAGTACCCAGTCACCGAGCACCAAACGTTTTCTTTTTCTGTTGTAGTACATCTGTTATACCTGGATGCAATGTTGAGCCCTTTACCCCGTGTACAAACAATTAATAGTTTTCGGATTGCTCTGAACCTGCTGACTTATTTATCCTAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760625             [CTGTGTTCTGAGTATGATGAAAACATCCCAANACTTTTTTTCCTATTCTGATAACATGCTGATCTTTTGTTTTTTGTTTTTCCCAGATCAAATTATTGACCTTTAACTTTCTTGTGCAGGGCAATGCTTTTAGCTCCAAGCATGATGCAGAGTCAGCACAGAGTTTTGATGAGCTTGAGGAGTTAGAGAGCAAGACCCCTATCAAGTTTTTGAACCTCCCAGAGAACATACTACTTAGCTTAAGAAGTGCTTTTGCTAAACAGACCAAACCAACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCAAGGGGAGATACATGGCAAAGAATCAATAGCTTAACTGCCATTTTAGTCAGGTTTTAAGAGGAGGCTGAAGGATAGAAATACCATTGTTAGCAAGCTAGTTTCCAAACTCGTCTTGTTCTGGTTCGTTGATTCTTTATTGGTAGCAGCTGAGTAGCTTAGTTCTATACACCAGTACCCAGTCACCGAGCACCAAACGTTTTCTTTTTCTGTTGTAGTACATCTGTTATACCTGGATGCAATGTTGAGCCCTTTACCCCGTGTACAAACAATTAATAGTTTTCGGATTGCTCTGAACCTGCTGACTTATTTATCCTAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_7185#1 CTGTGTTCTGAGTATGATGAAAACATCCCAANACTTTTTTTCCTATTCTGATAACATGCT GATCTTTTGTTTTTTGTTTTTCCCAGATCAAATTATTGACCTTTAACTTTCTTGTGCAGG GCAATGCTTTTAGCTCCAAGCATGATGCAGAGTCAGCACAGAGTTTTGATGAGCTTGAGG AGTTAGAGAGCAAGACCCCTATCAAGTTTTTGAACCTCCCAGAGAACATACTACTTAGCT TAAGAAGTGCTTTTGCTAAACAGACCAAACCAACATTACCTAGAAGGTCAGCAAGGCTTG TTCCAAAGTAATCGCTTTAAATGCAAGGGGAGATACATGGCAAAGAATCAATAGCTTAAC TGCCATTTTAGTCAGGTTTTAAGAGGAGGCTGAAGGATAGAAATACCATTGTTAGCAAGC TAGTTTCCAAACTCGTCTTGTTCTGGTTCGTTGATTCTTTATTGGTAGCAGCTGAGTAGC TTAGTTCTATACACCAGTACCCAGTCACCGAGCACCAAACGTTTTCTTTTTCTGTTGTAG TACATCTGTTATACCTGGATGCAATGTTGAGCCCTTTACCCCGTGTACAAACAATTAATA GTTTTCGGATTGCTCTGAACCTGCTGACTTATTTATCCTAAAAAAAAAAAAAAAAAAAAA AA



consensusID : consensus_7185#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 620
fasta sequence
                              [GCTATTCTCCAGATCATTGTATTCCCGGAAGCTTCAACCCACAAGCCCAACGCCATCACCTCTGCTTCGGCAATGCTTTTAGCTCCAAGCATGATGCAGAGTCAGCACAGAGTTCTGATGAGCTTGAGGAGTTAGAGAGCAAGACACCATCAAGTTTTGAACCTCCCAGAAACATACTACTTAGCTTAAGAAGTGCTTCTGCTAAACAGACCAACCACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCAAGGAGAGATACATGGCACAAGAATCAATAGCTTAACTGCCATCTTAGTCAGGTTTCTAAGAGGAGCCTGAAGGATAGAAATACCATTGTTTACAAAGCTAGTTTTCCAAACTCCTCTTTGGTTTCCTGGTTTCCTTGGATTCTCTTATTGGCTTAACCAACCTGATTAACCTTAAGTTCTAATAACAACCAGTAACAACAATTCCACCGACACCCAAACCGTTTTCTTCTTCTTTGTAAGAACAATTCTGTAATACCTGGATCCAATCGGACCCTTAACACCCGGGACCACCAATTCATAGTTTTCGGATTGCTCTGAACCTGCGGACTAATGTATCCATATACTTCGGAA]

[+] EMBL BI800121             [GCTATTCTCCAGATCATTGTATTCCCGGAAGCTTCAACCCACAAGCCCAACGCCATCACCTCTGCTTCGGCAATGCTTTTAGCTCCAAGCATGATGCAGAGTCAGCACAGAGTTCTGATGAGCTTGAGGAGTTAGAGAGCAAGACACCATCAAGTTTTGAACCTCCCAGAAACATACTACTTAGCTTAAGAAGTGCTTCTGCTAAACAGACCAACCACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCAAGGAGAGATACATGGCACAAGAATCAATAGCTTAACTGCCATCTTAGTCAGGTTTCTAAGAGGAGCCTGAAGGATAGAAATACCATTGTTTACAAAGCTAGTTTTCCAAACTCCTCTTTGGTTTCCTGGTTTCCTTGGATTCTCTTATTGGCTTAACCAACCTGATTAACCTTAAGTTCTAATAACAACCAGTAACAACAATTCCACCGACACCCAAACCGTTTTCTTCTTCTTTGTAAGAACAATTCTGTAATACCTGGATCCAATCGGACCCTTAACACCCGGGACCACCAATTCATAGTTTTCGGATTGCTCTGAACCTGCGGACTAATGTATCCATATACTTCGGAA]


>consensus_7185#2 GCTATTCTCCAGATCATTGTATTCCCGGAAGCTTCAACCCACAAGCCCAACGCCATCACC TCTGCTTCGGCAATGCTTTTAGCTCCAAGCATGATGCAGAGTCAGCACAGAGTTCTGATG AGCTTGAGGAGTTAGAGAGCAAGACACCATCAAGTTTTGAACCTCCCAGAAACATACTAC TTAGCTTAAGAAGTGCTTCTGCTAAACAGACCAACCACATTACCTAGAAGGTCAGCAAGG CTTGTTCCAAAGTAATCGCTTTAAATGCAAGGAGAGATACATGGCACAAGAATCAATAGC TTAACTGCCATCTTAGTCAGGTTTCTAAGAGGAGCCTGAAGGATAGAAATACCATTGTTT ACAAAGCTAGTTTTCCAAACTCCTCTTTGGTTTCCTGGTTTCCTTGGATTCTCTTATTGG CTTAACCAACCTGATTAACCTTAAGTTCTAATAACAACCAGTAACAACAATTCCACCGAC ACCCAAACCGTTTTCTTCTTCTTTGTAAGAACAATTCTGTAATACCTGGATCCAATCGGA CCCTTAACACCCGGGACCACCAATTCATAGTTTTCGGATTGCTCTGAACCTGCGGACTAA TGTATCCATATACTTCGGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      TCCCCCCCAAATCCGCCGCCTCCCCAAAATCACGCGAGGCGCCGGCGAATCCGCCTCCAC 60
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CTCCGCCGCCCGCCGCCCGCCGCCCGCCGCCGACCTCTCCTTCTCCTGCTTCCGCTTCCG 120
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CCGACGCTGTCAATCTGATGGGGTTGGAGGAAAGCCAAAAGCATCTCCTTGGCCTTAATT 180
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      ACCATGAGCTCCAATCTTTGTGCAAACAGTATAATCTTCCTGCAAACAAGAGTCACTCTC 240
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      AGCTAGCAAGCTCGCTTGCCTTGTTTCTTGAGAAGGGAAGAATAAATCCATCGCCTGAAA 300
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      AGAAAGCAGCAGCATCCCTTGTTGCCTTGCCCTCCTTGTTATCAAATGCCAAAGAAGTAT 360
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CCACCCGTTGCCAAGGTAGCCATAAAAGAGGTCCGCAAAGTGAAAGAGATGATGGTGATA 420
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      GACCTCTTCTGCATGTAAAACATCACAAAGGACCTCAAACACCAACAGATGAAACATTGA 480
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      AAAAAAATGACTCTGGAACCAGAGTGAGTTCTACACCAGTTTCAATCAACAATGGAAAAG 540
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      TAGACTGCTTTAGCCACTCACCTCCTCGTCAAGTGATTGCTTCTAATGTACATTCACAAA 600
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      GTGCTGATGGTATTGGAAAGAACTTGGGAACTCAAGAGCATCCAATTCATCTTGATTCAA 660
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CTGCTAAGGTAGATGATGAAATTTCTCCGGAAACAAGCTACCAGGCACCTAATGTTGTTG 720
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      AAACAGTTACAGATATTGGTAGTGGCTCATCTCATAAGATCTCAGAAAATGCAAAGTCTT 780
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CGTTTGAATTTTTTGTCATGTCAGATGAGGGACTTGATCTTGTTGTTGATCTGAATTCCA 840
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CTCCATCAATGTTACTTGATAGCTTGAAGAAGGAAGTGTTCATCCCCTCAAGTACCTGTC 900
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      GTTCTGAACCTGGAAATTTCTCTCATTTTATCAGTAGCCTGACGACAAAAGATGACAGCA 960
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      ACAACTCCATTTCTTCATCTGGGAATATTACTGTGGACATACAAAATAAGGGAGATGACA 1020
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      GCATTGCTCCTTGCACCAATTCATCACTAGGCTCAACCGGTGGTGACAATTCTCACTCAG 1080
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      AGCCCTATCTGCCTGATGCAACTGCTGTAAACTCTATGTCATTTGCATCCACATTACCTG 1140
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      GTACTTCACTAGAAATTTCTGGATCACAGGAGGGAGTTCCAGTCGTATCTTCTTCATGCT 1200
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      TAACCTCTATGACTGCTAATGCTTTGAATAATGAAGTGCTTCCTCAAGAATCTGTTGTGC 1260
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      TCTCAAAGTGTCCGGAAAGAAACCATGCTCCCCTTGCTTATGATTCCACACATCCAACTG 1320
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      GTAACAAAGACACAGTCAATCCTGTCAAAATCGGTTGCACTCAAAATGTTGTTGCTGATA 1380
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CTGATAGAGCTGGAGCATTCTCCTCAGGGGGTGTGGTTAGAAGTGCCTCCAATGAAAACT 1440
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      TCTGCCCAACTTCTGAAGAAAAACATGAAACGTTAAATGTTCCTGGAGCGCAGCTTACCC 1500
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CCAACGGTAATACCCATGAAGTTATATTGGAAAATGAACCAGTGGAAGCAGTGCCAGTGG 1560
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      ATGAAGATAGAGGTTGTCATGACAGGCTGTCAATGTCTTGTCAACTAGCCAGACAAACAG 1620
                                                                                  

consensus_7185#1      ------------------------------------------------------------
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      TAACTAAACTGCCAGTTACAGATGCCCAGTCAGAAGCTAGTTCTGCAGATCATTGTATTG 1680
                                                                                  

consensus_7185#1      ------------------------CTGTGTTCTGAGTATGATGAAAACATCCCAANACTT 36
consensus_7185#2      ------------------------------------------------------------
consensus_7185#0      CCGGAAGCTTCAAACCCACAAGCCCAACGCCATCACCTGCTGCTTCGTAAAGGGGAAGAA 1740
                                                                                  

consensus_7185#1      TTTTTCCTATTCTGATAACATGCTGATCT--TTTGTTTTTTGTTTTTCCCAGA---TCAA 91
consensus_7185#2      ---------------------GCTATTCT--CCAGATCATTGTATTCCCGGAAGCTTCAA 37
consensus_7185#0      AGAAGGAAAGCTGGTAAATATATTATTCTGGTCTAACTGTGGTCAAGTCTACATGTCCAA 1800
                                             *  ***          * **     *   *    ***

consensus_7185#1      ATTATTGACCTTTAACTTT---C--TTGTGCAG-GGCAATGCTTTTAGCTCCAAGCATGA 145
consensus_7185#2      CCCACAAGCCCAACGCCAT---CACCTCTGCTTCGGCAATGCTTTTAGCTCCAAGCATGA 94
consensus_7185#0      ATCTTAGATCTGCAGCTGCAAACCTGCATATTTGGGCAATGCTTTTAGCTCCAAGCATGA 1860
                               *     *      *     *     **************************

consensus_7185#1      TGCAGAGTCAGCACAGAGTTTTGATGAGCTTGAGGAGTTAGAGAGCAAGACCCCTATCAA 205
consensus_7185#2      TGCAGAGTCAGCACAGAGTTCTGATGAGCTTGAGGAGTTAGAGAGCAAGACACC-ATCAA 153
consensus_7185#0      TGCAGAGTCAGCACAGAGTTCTGATGAGCTTGAGGAGTTAGAGAGCAAGACACC-ATCAA 1919
                      ******************** ****************************** ** *****

consensus_7185#1      GTTTTTGAACCTCCCAGAGAACATACTACTTAGCTTAAGAAGTGCTTTTGCTAAACAGAC 265
consensus_7185#2      GTTTT-GAACCTCCCAGA-AACATACTACTTAGCTTAAGAAGTGCTTCTGCTAAACAGAC 211
consensus_7185#0      GTTTT-GAACCTCCCAGA-AACATACTACTTAGCTTAAGAAGTGCTTCTGCTAAACAGAC 1977
                      ***** ************ **************************** ************

consensus_7185#1      CAAACCAACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCA 325
consensus_7185#2      CAACC--ACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCA 269
consensus_7185#0      CAAACCAACATTACCTAGAAGGTCAGCAAGGCTTGTTCCAAAGTAATCGCTTTAAATGCA 2037
                      *** *  *****************************************************

consensus_7185#1      AGGGGAGATACATGGCA-AAGAATCAATAGCTTAACTGCCATTTTAGTCAGGTTT-TAAG 383
consensus_7185#2      AGGAGAGATACATGGCACAAGAATCAATAGCTTAACTGCCATCTTAGTCAGGTTTCTAAG 329
consensus_7185#0      AGGAGAGATACATGGCA-AAGAATCAATAGCTTAACTGCCATCTTAGTCAGGTTC-TAAG 2095
                      *** ************* ************************ ***********  ****

consensus_7185#1      AGGAGGCTGAAGGATAGAAATACCATTGTTAGCAA-GCTAGTTT-CCAAACTCGTCTT-- 439
consensus_7185#2      AGGAGCCTGAAGGATAGAAATACCATTGTTTACAAAGCTAGTTTTCCAAACTCCTCTTTG 389
consensus_7185#0      AGGAGGCTGAAGGATAGAAATACCATTGTTAGCAA-GCTAGTTT-CCAAACTTGTCTT-- 2151
                      ***** ************************  *** ******** *******  ****  

consensus_7185#1      --GTTCTGGTTCGTT--GATTCT-TTATTGG--TAGC--AGCTGAGTAGCTT--AGTTCT 488
consensus_7185#2      GTTTCCTGGTTTCCTTGGATTCTCTTATTGGCTTAACCAACCTGATTAACCTTAAGTTCT 449
consensus_7185#0      --GTTCTGGTTCGTT--GATTCT-TTATTGG--TAGC--AGCTGAGTAGCTT--AGTTCT 2200
                         * ******   *  ****** *******  ** *  * **** ** * *  ******

consensus_7185#1      A--TACA-CCAGTACC--CAGT--CACCGAGCACCAAAC---------GTTTTCTTTTTC 532
consensus_7185#2      AATAACAACCAGTAACAACAATTCCACCGACACCCAAACC--------GTTTTCTTCTTC 501
consensus_7185#0      A--TACA-CCAGTACA--CAGT--CACCGAGCACCAAACGTTTTCTTCTTTTTCTTCTTC 2253
                      *   *** ******    ** *  ******   ******          ******* ***

consensus_7185#1      TGTTGTAGTACA--TCTGTTATACCTGGATGCAATGTTGAGCCCTTTACCCCGTGTACAA 590
consensus_7185#2      TTTGTAAGAACAATTCTGTAATACCTGGATCCAAT--CGGACCCTTAACACCCGGGACCA 559
consensus_7185#0      TGTTGTAGTACA--TCTGTTATACCTGGATGCAATGCTGAGCCCTTTACACCGTGTACAA 2311
                      * *   ** ***  ***** ********** ****   *  ***** ** **  * ** *

consensus_7185#1      ACAATTAATAGTTTTCGGATTGCTCTGAACCTGCTGACTTATTTATCCTAAAAAAAAAAA 650
consensus_7185#2      CCAATTCATAGTTTTCGGATTGCTCTGAACCTGCGGACTAATGTATCCATATACTTCGGA 619
consensus_7185#0      ACAATTCATAGTTTTCGGATAGCTCTGAAC------------------------------ 2341
                       ***** ************* *********                              

consensus_7185#1      AAAAAAAAAAAA 662
consensus_7185#2      A----------- 620
consensus_7185#0      ------------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)