cluster # 7194

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Oryza sativa
cluster # 7194 cluster # 7194 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7194#0 length = 1007 sequences # 4
consensusID : consensus_7194#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1007
fasta sequence
                              [TCCTCCCTCCTCTCCGCGCGCCGCCGCCGTCGCTCGCCGGCGGCGCGGCGGCGGCGGCCGGTGGTGGGGGCCGGTGGCGCCGTGCCGTGCCGAGACGGGCTAGGGCCCGCCGCGCCGTCGTCCCGCCCCGCGCGTCGCTCGTCGACAGCAGCGGCGGCGCGGCCGCCGCCGCCGTGCTCCTGGACGCGGCGGTGGCCGGGGCGACGGGGTACTCGCAGGCGAGCTACTACACGTCGCTGGGGCTCTTCGTGCTCTCCGTCCCTGGCCTCTGGTCGCTCATCAAGCGCTCCGTCAAGTCCAAGGTTGTGCAGAAGACATTCGTCAAGGAGGAAGGGCAGACGATGGCGCCGAACCAGGTGGCTGGGGAGATCCTCTCGTTCTTCACCCGTAACAAC-TTCACCATCTCTGACCGTGGCGAGGTTATCACTTTTGAGGGCACTATGGTGCCGAGCAGGGGGCAAGCAGCACTTCTTACCTTCTGCACCTGCATTAGCCTTGGCAGCGTCGGTCTTGTTCTATCAATTGCAGTCCCGGAGGGTGGCAACAACTGGTTCTGGCTTATGACCTTAAGCCCATTGGCGGGTGTATACTACTGGACAAAGGCATCAAGAAAAGAAGAGATCAAGGTCAAAATGA-TTTTATCGGATGACGGGAATGTATCCGAAATTCTTGTGCGGGGTGATGATGTCCAAGTGGAGCAGATGAGGAAGGAGCTCAAGTTCAGTGAGAAGGGGATGATATATGTTAAGGGGATCTTTGAAACATGATTGAATAGC-TTGTTATCTACAGAACAGAGCTAACAAAAGAG-TTCAAAAGAGCAGTTCCCTTGG-TTCAAACTTCAGGTGA-GGGAGATTTT-GAATACCTACGGGC--AAATCTG-TATCTTGGCTTGAGAGGAAAAGAGGTGTATCCATGTGAGACTCCCTTAAGATCGTGACCCAAATTTTTTACCTTGGATATATATAGTGGCTCAACAAGCAACTCTTTTCATGAAAAAAAAAAAAAAAAAA]

[+] EMBL CB680445             [TCCTCCCTCCTCTCCGCGCGCCGCCGCCGTCGCTCGCCGGCGGCGCGGCGGCGGCGGCCGGTGGTGGGGGCCGGTGGCGCCGTGCCGTGCCGAGACGGGCTAGGGCCCGCCGCGCCGTCGTCCCGCCCCGCGCGTCGCTCGTCGACAGCAGCGGCGGCGCGGCCGCCGCCGCCGTGCTCCTGGACGCGGCGGTGGCCGGGGCGACGGGGTACTCGCAGGCGAGCTACTACACGTCGCTGGGGCTCTTCGTGCTCTCCGTCCCTGGCCTCTGGTCGCTCATCAAGCGCTCCGTCAAGTCCAAGGTTGTGCAGAAGACATTCGTCAAGGATGAAGGGCAGACGATGGCGCCGAACCAGGTGGCTGGGGAGATCCTCTCGTTCTTCACCCGTAACAAC TTCACCATCTCTGACCGTGGCGAGGTTATCACTTTTGAGGGCACTATGGTGCCGAGCAGGGGGCAAGCAGCACTTCTTACCTTCTGCACCTGCATTAGCCTTGGCAGCGTCGGTCTTGTTCTATCAATTGCAGTCCCGGAGGGTGGCAACAACTGGTTCTGGCTTATGACCTTAAGCCCATTGGCGGGTGTATACTACTGGACAAAGGCATCAAGAAAAGAAGAGATCAAGGTCAAAATGA TTTTATCGGATGACGGGAATGTATCCGANATTCTTGTGCGGGGTGATGATGTCCAAGTGGAGCAGATGAGGAAGGAGCTCAAGTTCAGTGAGAAGGGGATGATATATGTTAAGGGGATCTT                                                                                                                                                                                                                                                                  ]
[+] EMBL AU162232             [                                                                                                                                                                               GCTCCTGGACGCGGCGGTGGCCGGGGCGACGGGGTACTCGCAGGCGAGCTACTACACGTCGCTGGGGCTCTTCGTGCTCTCCGTCCCTGGCCTCTGGTCGCTCATCAAGCGCTCCGTCAAGTCCAAGGTTGTGCAGAAGACATTCGTCAAGGAGGAAGGGCAGACGATGGCGCCGAACCAGGTGGCTGGGGAGATCCTCTCGTTCTTCACCCGTAACAAC TTCACCATCTCTGACCGTGGCGAGGTTATCACTTTTGAGGGCACTATGGTGCCGAGCAGGGGGCAAGCAGCACTTCTTACCTTCTGCACCTGCATTAGCCTTGGCAGCGTCGGTCTTGTTCTATCAATTGCAGTCCCGGAGGGTGGCAACAACTGGTTCTGGCTTATGACCTTAAGCCCATTGGCGGGTGTATACTACTGGACAAAGGCATCAAGAAAAGAAGAGATCAAGGTCAAAATGATTTTTATCGGATGACGGGAATGTATCCGAAATTCTTGTGCGGNGTGATGATGTCCAAGTGGAGCAGATGAGGAAGGAGCTCAAGTTCAGTGAGAAGGGGATGATATATGTTAAGGGGATCTTTGAAACATGATTGAATAGCTTTGGTATCTACAGAACAGAGCTAACNAAAGAGTTTCAAAAGAACAGTTTCCTTGGNTTCAAACTTCAGGTGAGGGGAGATTTTGGAATACCTACGGGCCAAAATCTGNGATCTTtg                                                                                                                          ]
[-] EMBL CA762625             [                                                                                                                                                                                                                                                                                                                           ccTTTGTCAAGGAGGAAGGGCAGACGATGGCGCCGAACCAGGTGGCTGGGGAGATCCTCTCGTTCTTCACCCGTAACAACTTTCACCATCTCTGACCGTGGCGAGGTTATCACTTTTGAGGGTACAATGGTGCCGAGCAGGGGGCAAGCAGCACTTTTTACCTTTTGCACCTGCATTAGCCTTGGGAGGGTCGGTCTTGTTCTATCAATTGCAGTCCCGGAGGGTGGCAACAACTGGTTTTGGCTTATGACCTTAAGCCCATTGGCGGGTGTATACTTCTGGGCAAAGGCATCAAGAAAAGAAGAGATCAAGGTCAAAATGA TTTTATTGGATGACGGGAATGTATCCGAAATTTTTTTGCGGGGTGATGATGTCCAAGTGGAGCAGATGAGGAAGGAGCTCAAGTTCAGTGAGAAGGGGATGATATATGTTAAGGGGATCTTTGAAACATGATTGAATAGC TTGTTATTTACAGAACAGAGCTAACAAAAGAG TTCAAAAGAGCAGTTCCCTTGG TTCAAACTTCAGGTGA GGGAGATTTT GAATACCTACGGGC  AAATTTG TATTTTGGCTTGAGAGGAAAAGAGGTGTATCCATGTGAGACTCCCTTAAGATCGTGACCCAAATTTTTTACCTTGGATATATATAGTGGCTCAACAAGCAACTCTTTTCATGAAAAAAAAAAAAAAAAAA]
[+] EMBL C99415               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGACAAAGGCATCAAGAAAAGAAGAGATCAAGGTCAAAATGA TTTTATCGGATGACGGGAATGTATCCGAAATTCTTGTGCGGGNTGATGATGTCCAAGTGGAGCAGATGAGGAAGGAGCTCAAGTTCAGTGAGAAGGGGATGATATATGTTAAGGGGATCTTTGAAACATGATTGAATAGC TTGTTATCTACAGAACAGAGCTAACAAAAGAG TTCAAAAGAGCAGTTCCCTTGG TTCAAACTTCAGGTGA GGGAGATTTT GAATA CTACGGGC  AAATCTG TATCTTGGCTTGAGAGGAAAAGAGGTGTATCCATGTGAGACTCCATTAAGATCGTGACACAAATTTTCTACCTAGGATATATATAGTGACTCAACAAGCAACTCTTTTCATGAAAAAAAA          ]




>consensus_7194#0
TCCTCCCTCCTCTCCGCGCGCCGCCGCCGTCGCTCGCCGGCGGCGCGGCGGCGGCGGCCG
GTGGTGGGGGCCGGTGGCGCCGTGCCGTGCCGAGACGGGCTAGGGCCCGCCGCGCCGTCG
TCCCGCCCCGCGCGTCGCTCGTCGACAGCAGCGGCGGCGCGGCCGCCGCCGCCGTGCTCC
TGGACGCGGCGGTGGCCGGGGCGACGGGGTACTCGCAGGCGAGCTACTACACGTCGCTGG
GGCTCTTCGTGCTCTCCGTCCCTGGCCTCTGGTCGCTCATCAAGCGCTCCGTCAAGTCCA
AGGTTGTGCAGAAGACATTCGTCAAGGAGGAAGGGCAGACGATGGCGCCGAACCAGGTGG
CTGGGGAGATCCTCTCGTTCTTCACCCGTAACAACTTCACCATCTCTGACCGTGGCGAGG
TTATCACTTTTGAGGGCACTATGGTGCCGAGCAGGGGGCAAGCAGCACTTCTTACCTTCT
GCACCTGCATTAGCCTTGGCAGCGTCGGTCTTGTTCTATCAATTGCAGTCCCGGAGGGTG
GCAACAACTGGTTCTGGCTTATGACCTTAAGCCCATTGGCGGGTGTATACTACTGGACAA
AGGCATCAAGAAAAGAAGAGATCAAGGTCAAAATGATTTTATCGGATGACGGGAATGTAT
CCGAAATTCTTGTGCGGGGTGATGATGTCCAAGTGGAGCAGATGAGGAAGGAGCTCAAGT
TCAGTGAGAAGGGGATGATATATGTTAAGGGGATCTTTGAAACATGATTGAATAGCTTGT
TATCTACAGAACAGAGCTAACAAAAGAGTTCAAAAGAGCAGTTCCCTTGGTTCAAACTTC
AGGTGAGGGAGATTTTGAATACCTACGGGCAAATCTGTATCTTGGCTTGAGAGGAAAAGA
GGTGTATCCATGTGAGACTCCCTTAAGATCGTGACCCAAATTTTTTACCTTGGATATATA
TAGTGGCTCAACAAGCAACTCTTTTCATGAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case