These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_721#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 166 fasta sequence [GATTTCGCCCTTGCTGTCACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTAATAAAGCTTCAACATGGATAAAACATTATCAGGATAAACCGATCAAGTCACACGAATTTTTTCGGAGTACGATTTCCTACTCCTTCAGTCCAT] [+] EMBL CF291790 [GATTTCGCCCTTGCTGTCACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTAATAAAGCTTCAACATGGATAAAACATTATCAGGATAAACCGATCAAGTCACACGAATTTTTTCGGAGTACGATTTCCTACTCCTTCAGTCCAT] consensusID : consensus_721#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 82 fasta sequence [AATTCGCCCTTGCTGTCACGATACGCTACGTAACGGCATGACATGTGTTTTTTTTTTTTTTTTTTTTTTGGGATGAAAGCAG] [+] EMBL CF277947 [AATTCGCCCTTGCTGTCACGATACGCTACGTAACGGCATGACATGTGTTTTTTTTTTTTTTTTTTTTTTGGGATGAAAGCAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_721#0 GATTTCGCCCTTGCTGTCACGATACGCTACGTAACGGCATGACAT-TGTTTTTTTTTTTT 59 consensus_721#1 -AATTCGCCCTTGCTGTCACGATACGCTACGTAACGGCATGACATGTGTTTTTTTTTTTT 59 * ****************************************** ************** consensus_721#0 TTTTTTTTTTTTTAATAAAGCTTCAACATGGATAAAACATTATCAGGATAAACCGATCAA 119 consensus_721#1 TTTTTTTTTTGGGATGAAAGCAG------------------------------------- 82 ********** * ***** consensus_721#0 GTCACACGAATTTTTTCGGAGTACGATTTCCTACTCCTTCAGTCCAT 166 consensus_721#1 ----------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||