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Oryza sativa
cluster # 7304 cluster # 7304       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7304#0 length = 746 sequences # 4  

consensusID : consensus_7304#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 746
fasta sequence
                              [TCCTCCGCTTCCATCTCCCGCGCCTCGCAGCAGTCGATGACCGGGGAGAGGACCGTGAAGAGGTTAAGATTGTCCAAGGCACTGACGATTCCGGATCACACAACCGTCTACGAGGCTTGTCGGAGGATGGCTGCACGCAGGGTGGACGCTGTGTTGCTGACCGACTCCAATGCTTTGCTGTGCGGGATCCTTACTGACAAGGACATAACCACAAGAGTAATTGCTCGCGAATTGAAGCTAGAAGAGACACCTGTTTCAAAGGTCATGACAAGAAATCCTCTCTTTGTTCTGTCTGACACACTCGCGGTCGAGGCATTGCAGAAGATGGTGCAAGGTAAGTTCAGACATTTACCTGTCGTGGAGAACGGTGAAGTCATTGCACTGCTCGACATAGCCAAGTGCCTGTATGATGCTATTGCGCGAATGGAAAGGGCAGCCGAGAAAGGAAAAGCCATTGCTGCTGCTGTTGAGGGTGTAGAGAAGCACTGGGGAGCTTCTGTGTCTGGTCCTAATACTTTTATTGAGACTCTTCGAGAGCGGATGTTTAGGCCATCACTATCTACCATTATTTCTGAGAATTCAAA----AGTGGTGACTGGTGCACCAACTGACACAGTGTTGACGGCATCAAAAAAGATGCTTGAAGTTAAAGTAAGTTCAGCGGATGTAGCAATTGAAAACAAGCCTGGGGGGATTCTGACCTCTAGAGATATTTTGATGCGTGTTATAGCACAGAATCTCCCACCTGA]

[+] EMBL CB656633             [TCCTCCGCTTCCATCTCCCGCGCCTCGCAGCAGTCGATGACCGGGGAGAGGACCGTGAAGAGGTTAAGATTGTCCAAGGCACTGACGATTCCGGATCACACAACCGTCTACGAGGCTTGTCGGAGGATGGCTGCACGCAGGGTGGACGCTGTGTTGCTGACCGACTCCAATGCTTTGCTGTGCGGGATCCTTACTGACAAGGACATAACCACAAGAGTAATTGCTCGCGAATTGAAGCTAGAAGAGACACCTGTTTCAAAGGTCATGACAAGAAATCCTCTCTTTGTTCTGTCTGACACACTCGCGGTCGAGGCATTGCAGAAGATGGTGCAAGGTAAGTTCAGACATTTACCTGTCGTGGAGAACGGTGAAGTCATTGCACTGCTCGACATAGCCAAGTGCCTGTATGATGCTATTGCGCGAATGGAAAGGGCAGCCGAGAAAGGAAAAGCCATTGCTGCTGCTGTTGAGGGTGTAGAGAAGCACTGGGGAGCTTCTGTGTCTGGTCCTAATACTTTTATTGAGACTCTTCGAGAGCGGATGTTTANGCCATCACTATCTACCATTATTTCTGAGAATTCAAA    AGTGGTGACTGGTGCACCAACTGACACAGTGTTGACGGCATCAAAAAAGATGCTTGAAG                                                                                                       ]
[+] EMBL CB631346             [TCCTCCGCTTCCATCTCCCGCGCCTCGCAGCAGTCGATGACCGGGGAGAGGACCGTGAAGAGGTTAAGATTGTCCAAGGCACTGACGATTCCGGATCACACAACCGTCTACGAGGCTTGTCGGAGGATGGCTGCACGCAGGGTGGACGCTGTGTTGCTGACCGACTCCAATGCTTTGCTGTGCGGGATCCTTACTGACAAGGACATAACCACAAGAGTAATTGCTCGCGAATTGAAGCTAGAAGAGACACCTGTTTCAAAGGTCATGACAAGAAATCCTCTCTTTGTTCTGTCTGACACACTCGCGGTCGAGGCATTGCAGAAGATGGTGCAAGGTAAGTTCAGACATTTACCTGTCGTGGAGAACGGTGAAGTCATTGCACTGCTCGACATAGCCAAGTGCCTGTATGATGCTATTGCGCGAATGGAAAGGGCAGCCGAGAAAGGAAAAGCCATTGCTGCTGCTGTTGAGGGTGTAGAGAAGCACTGGGGAGCTTCTGTGTCTGGTCCTAATACTTTTATTGAGACTCTTCGAGAGCGGATGTTTAGGCCATCACTATCTACCA                                                                                                                                                                                         ]
[+] EMBL CB646965             [TCCTCCGCTTCCATCTCCCGCGCCTCGCAGCAGTCGATGACCGGGGAGAGGACCGTGAAGAGGTTAAGATTGTCCAAGGCACTGACGATTCCGGATCACACAACCGTCTACGAGGCTTGTCGGAGGATGGCTGCACGCAGGGTGGACGCTGTGTTGCTGACCGACTCCAATGCTTTGCTGTGCGGGATCCTTACTGACAAGGACATAACCACAAGAGTAATTGCTCGCGAATTGAAGCTAGAAGAGACACCTGTTTCAAAGGTCATGACAAGAAATCCTCTCTTTGTTCTGTCTGACACACTCGCGGTCGAGGCATTGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB664283             [                                                                                                                                      ACGCAGGGTGGACGCTGTGTTGCTGACCGACTCCAATGCTTTGCTGTGCGGGATCCTTACTGACAAGGACATAACCACTAGAGTAATTGCTCGCGAATTGAAGCTAGAATAGACACCTGTTTCAAAGGTCATGACAAGAAATCCTCTCTTTGTTCTGTCTGACACACTCGCGGTCGAGGCATTGCAGAATATGGTGCAAGGTAAGTTCAGACATTTACCTGTCGTGGAGAACGGTGAAGTCATTGCACTGCTCGACATAGCCAAGTGCCTGTATGATGCTATTGCGCGAATGGAAAGGGCAGCCGAGAAAGGAAAAGCCATTGCTGCTGCTGTTGAGGGTGTACAGAATCACTGGGGAGCTTCTGTGTCTGGTCCTAATACTTTTATTGAGACTCTTCGAGAGCGGATGTTTAGGCCATCACTATCTACCATTATTTCTGAGAATTCAAAGTAGAGTGGTGACTGTTGCACCAACTGACACAGTGTTGACGGCATCAAAAAAGATGCTTGAAGTTAAAGTAAGTTCAGCGGATGTAGCAATTGAAAACAAGCCTGGGGGGATTCTGACCTCTAGAGATATTTTGATGCGTGTTATAGCACAGAATCTCCCACCTGA]


>consensus_7304#0 TCCTCCGCTTCCATCTCCCGCGCCTCGCAGCAGTCGATGACCGGGGAGAGGACCGTGAAG AGGTTAAGATTGTCCAAGGCACTGACGATTCCGGATCACACAACCGTCTACGAGGCTTGT CGGAGGATGGCTGCACGCAGGGTGGACGCTGTGTTGCTGACCGACTCCAATGCTTTGCTG TGCGGGATCCTTACTGACAAGGACATAACCACAAGAGTAATTGCTCGCGAATTGAAGCTA GAAGAGACACCTGTTTCAAAGGTCATGACAAGAAATCCTCTCTTTGTTCTGTCTGACACA CTCGCGGTCGAGGCATTGCAGAAGATGGTGCAAGGTAAGTTCAGACATTTACCTGTCGTG GAGAACGGTGAAGTCATTGCACTGCTCGACATAGCCAAGTGCCTGTATGATGCTATTGCG CGAATGGAAAGGGCAGCCGAGAAAGGAAAAGCCATTGCTGCTGCTGTTGAGGGTGTAGAG AAGCACTGGGGAGCTTCTGTGTCTGGTCCTAATACTTTTATTGAGACTCTTCGAGAGCGG ATGTTTAGGCCATCACTATCTACCATTATTTCTGAGAATTCAAAAGTGGTGACTGGTGCA CCAACTGACACAGTGTTGACGGCATCAAAAAAGATGCTTGAAGTTAAAGTAAGTTCAGCG GATGTAGCAATTGAAAACAAGCCTGGGGGGATTCTGACCTCTAGAGATATTTTGATGCGT GTTATAGCACAGAATCTCCCACCTGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)