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Oryza sativa
cluster # 7316 cluster # 7316       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7316#0 length = 754 sequences # 4  

consensusID : consensus_7316#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 754
fasta sequence
                              [AAATCCCCAGTCCCGCGCAACCTTCAGCTC-TCGGTCTGCGTTAGCTCCTGAAGAATCGAAGCAATGGC-GGACCTCTTCTTCGGTGGCCCCTTCCGGCGAATCCTCTACGGGCGGCCCTTCCCGCCGGATTGGGCGTCGGCGTCGGCGACGGCGGCGATGGACTGGGTCGAGACGCCGACCTCCCACGTGCTCA-GGATCAACGTCCCGGGACTGGGCAAGGACGACGTCAAGGTGCAGGTGGAGGACGGCAACGTGCTCACCGTGAGGGGCGCGGCGCCGCACGCGGCGGCGGAGAAGGAGAGGGAGAGGGAGAAGGATGTGGTGTGGCACGTGGCGGAGCGCGGGCGGCCGGAGTTCGCGAGGGAGGTGGCGCTGCCGGCGGAGGTGAGGGTGGAGCAGATCAGGGCCAGCGTCGACAACGGCGTGCTCACCGTCGTCGTGCCCAAGGAGCCCGCGCCGGCCCGGCCCAGGACCAGGCCCATCGCCGTCTCCAGCAAGCTCTGATCCTGATCAAGCCCGACCCTTTGTGCATTGTGCGCAAGTGTTTCTGTGTTTGTGAACTGTAGTCGATTATAG-CAACCATCAGTCGAATGTTGTGAAGGGCGAATGTGTATTGGAAGTCCAAATCTTAATGTTGAAAATTTTGAAAAATTTTAGAGGTTTGAATTACTAGTATATCTATGTAATAATCTAATTAATAAAGGTGGGTCTTCTGCAAAANCCNANAAAAAAAAANAAAAAAAAAAAAAAAAAA]

[+] EMBL AK105317             [AAATCCCCAGTCCCGCGCAACCTTCAGCTC TCGGTCTGCGTTAGCTCCTGAAGAATCGAAGCAATGGC GGACCTCTTCTTCGGTGGCCCCTTCCGGCGAATCCTCTACGGGCGGCCCTTCCCGCCGGATTGGGCGTCGGCGTCGGCGACGGCGGCGATGGACTGGGTCGAGACGCCGACCTCCCACGTGCTCA GGATCAACGTCCCGGGACTGGGCAAGGACGACGTCAAGGTGCAGGTGGAGGACGGCAACGTGCTCACCGTGAGGGGCGCGGCGCCGCACGCGGCGGCGGAGAAGGAGAGGGAGAGGGAGAAGGATGTGGTGTGGCACGTGGCGGAGCGCGGGCGGCCGGAGTTCGCGAGGGAGGTGGTGCTGCCGGCGGAGGTGAGGGTGGAGCAGATCAGGGCCAGCGTCGACAACGGCGTGCTCACCGTCGTCGTGCCCAAGGAGCCCGCGCCGGCCCGGCCCAGGACCAGGCCCATCGCCGTCTCCAGCAAGCTCTGATCCTGATCAAGCCCGACCCTTTGTGCATTGTGCGCAAGTGTTTCTGTGTTTGTGAACTGTAGTCGATTATAG CAACCATCAGTCGAATGTTGTGAAGGGCGAATGTGTATTGGAAGTCCAAATCTTAATGTTGAAAATTTTGAAAAATTTTAGAGGTTTGAATTACTAGTATATCTATGTAATAATCTAATTAATAAAGGTG                                                ]
[+] EMBL C73284               [           CCCGCGCAACCTTCAGCTC TCGGTCTGCGTTA NTCCTGAAGAATCGAAGCAATGGC GGACCTCTTCTTCGGTGGCCCCTTCCGGCGAATCCTCTACGGGCGGCCCTTCCCGCCGGATTGGGCGTCGGCNTCGGCNACGGCGGCGATGGACTGGGTCGAGACGCCGACCTCCCACGTGCTCA GGATCAACGTCCCGGGACTGGGCAAGGACGACGTCAAGGTGCAGGTGGAGGACGGCAACGTGCTCACCGTGAGGGGCGCGGCGCCGCACGCGGCGGCGGAGAAGGAGAGGGAGAGGGAGAAGGATGTGGTGTGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU082489             [             CGGGCAACNTTCAGCTCTTCGGTCTGCGTTAGCTCCTGAAGAATCGAAGCAATGGCGGGACNTCTTCTTCGGTGGCCCCTTCCGGCGAATCCTCTAC GGCGGCCCTTCCCGCCGGATTGGGCGTCGGCGTCGGCGACGGCGGCGATGGACTGGGTCGAGACGCCGACCTCCCACGTGCTCA GGATCAACGTCCCGGGACTGGGCAAGGACGACGTCAAGGTGCAGGTGGAGGACGGCAACGTGCTCACCGTGAGGGGCGCGGCGCCGCACGCGGCGGCGGAGAAGGAGAGGGAGAGGGAGAAGGATGTGGTGTGGCACGTGGCGGAGCGCGGGCGGCCGGAGTTCGCGAGGGAGGTGGCGCTGCCGGCGGAGGTGAGGGTGGAGCAGATCAGGGCCAGCGTCGACAACGGCGTGCTCACCGTCGTCGTGCCCAAGGAGCCCGCGCCGGCCCGGCCCAGGACCAGGCCCATCGCCGTCTCCAGCAAGCTCTGATCCTGATCAAGCCCGACCCTTTGTGCATTGTGCGCAAGTGTTTCTGTGTTTGTGAACTGTAGTCGATTATAG CAACCATCAGTCGAATGTTGTGAAGGGCGAATGTGTATTGGAAGTCCAAATCTTAATGTTGAAAATTTTGAAAA                                                                                                        ]
[+] EMBL BM422134             [                                                                                                                                                                                             TGCTCAGGGATCAACGTCCCGGGACTGGGCAAGGACGACGTCAAGGTGCAGGTGGAGGA GGCAACGTGCTCACCGTGAGGGGCGCGGC CCGCACGCGGCGGCGGAGAAGGAGAGGGAGAGGGAGAAGGAGGTGGTGTGGCACGTGGCGGAGCGCGGGCGGCCGGAGTTCGCGAGGGAGGTGGCGCTGCCGGCGGAGGTGAGGGTGGAGCAGATCAGGGCCAGCGTCGACAACGGCGTGCTCACCGTCGTCGTGCCCAAGGAGCCCGCGCCGGCCCGGCCCAGGACCAGGCCCATCGCCGTCTCCAGCAAGCTCTGATCCTGATCAAGCCCGACCCTTTGTGCATTGTGCGCAAGTGTTTCTGTGTTTGTGAACTGTAGTCGATTATAGCCNACCATCAGTCGAATGTTGTGAAGGGCGAATGTGTATTGGAAGTCCNAATCTTAATGTTGAAAATTTTGAAAAATTTTAGAGGTTTGAATTACTAGTATATCTATGTAATAATCTAATTAATAAAGGTGGGTCTTCTGCAAAANCCNANAAAAAAAAANAAAAAAAAAAAAAAAAAA]


>consensus_7316#0 AAATCCCCAGTCCCGCGCAACCTTCAGCTCTCGGTCTGCGTTAGCTCCTGAAGAATCGAA GCAATGGCGGACCTCTTCTTCGGTGGCCCCTTCCGGCGAATCCTCTACGGGCGGCCCTTC CCGCCGGATTGGGCGTCGGCGTCGGCGACGGCGGCGATGGACTGGGTCGAGACGCCGACC TCCCACGTGCTCAGGATCAACGTCCCGGGACTGGGCAAGGACGACGTCAAGGTGCAGGTG GAGGACGGCAACGTGCTCACCGTGAGGGGCGCGGCGCCGCACGCGGCGGCGGAGAAGGAG AGGGAGAGGGAGAAGGATGTGGTGTGGCACGTGGCGGAGCGCGGGCGGCCGGAGTTCGCG AGGGAGGTGGCGCTGCCGGCGGAGGTGAGGGTGGAGCAGATCAGGGCCAGCGTCGACAAC GGCGTGCTCACCGTCGTCGTGCCCAAGGAGCCCGCGCCGGCCCGGCCCAGGACCAGGCCC ATCGCCGTCTCCAGCAAGCTCTGATCCTGATCAAGCCCGACCCTTTGTGCATTGTGCGCA AGTGTTTCTGTGTTTGTGAACTGTAGTCGATTATAGCAACCATCAGTCGAATGTTGTGAA GGGCGAATGTGTATTGGAAGTCCAAATCTTAATGTTGAAAATTTTGAAAAATTTTAGAGG TTTGAATTACTAGTATATCTATGTAATAATCTAATTAATAAAGGTGGGTCTTCTGCAAAA NCCNANAAAAAAAAANAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)