Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7344 cluster # 7344       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7344#0 length = 831 sequences # 4  

consensusID : consensus_7344#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 831
fasta sequence
                              [TTTTTTTTTTTGGTAGGGACAACTTTGATTTCATTACTCAAGTTGTTTGACTTTATCCTTTTGGCATTTGTACAACCATCATTATCAGGCGTGCATTCATTTTACCCACAGAATTGACAATTAGTGATACAACAGTTTACATAATAACGGCTCAAACGCACGACCACGCCTCATCCTGTCATTTCCCATCCACCCCGTCTCCATATCTGGAAAATTTTTATCTACAGAAAACGTATTCAGACGTCTAATGGACATAAAGAATACATGTCAACTATGGCTTCAGTCATATGGTCCTATGCAAAGATTTCCTGAGATCAAACCCCAGATTTTGGTTTTCAGCGTGATGAAGTGATAATACCAGACACATGGAACTTCCATTTAGAGCGCATGTGGTAGCGTCTGATTGCCAGCGTCCAAGATGATTTCATCATTTGCAGGTGTTGTGCTGAGATAGCTCAAAGCTGACATTCTGTACAGCAATGTAAATACAAGGAGATGTAATCCAATAGTGTAGAAGAATATAAATGTCCGGGCATATTTGTTACCAAGGAGAAAACGTCCACTGCTAAGAGTGATTTTGTCTCTTAAACCAAGTTCCTTGTACCGTTGATCCTTTTCCTTCTTTGAAAAAGCAGCANAAGG-ATTTATGTCATCCTCATACATTTTCTTGTACTTCGTCTCAACATCTGAAGAACCACTTTCAACATCTTCTGCATACTTCTTTGGTCCTCTGGAAACAATCTTCTCATGGCTGTAGTCCTGCACGTAACGAATCTTCCCATACAGTTGAACATTATCTGCTTTAGTTTTTTCCAATTCTACAACTAGCAT]

[+] EMBL CA759201             [TTTTTTTTTTTGGTAGGGACAACTTTGATTTCATTACTCAAGTTGTTTGACTTTATCCTTTTGGCATTTGTACAACCATCATTATCAGGCGTGCATTCATTTTACCCACAGAATTGACAATTAGTGATACAACAGTTTACATAATAACGGCTCAAACGCACGACCACGCCTCATCCTGTCATTTCCCATCCACCCCGTCTCCATATCTGGAAAATTTTTATCTACAGAAAACGTATTCAGACGTCTAATGGACATAAAGAATACATGTCAACTATGGCTTCAGTCATATGGTCCCATGCAAAGATTTCCTGAGATCAAACCCCAGATTTTGGTTTTCAGCGTGATGAAGTGATAATACCAGACACATGGAACTTCCATTTAGAGCGCATGTGGTAGCGTCTGATTGCCAGCGTCCAAGATGATTTCATCATTCGCAGGTGCTGTGCTGAGATAGCTCAAAGCTGACATTCTGTACAGCAATGTAAATACAAGGAGATGTAATCCAATAGTGTAGAAGAATATAAATGTCCGGGCATATTTGTTACCAAGGAGAAAACGTCCACTGCTAAGAGTGATTTTGTCTCTTAAACCAAGTTCCTTGTACCGTTGATCCTTTTCCTTCTTTGAAAAAGCAGCANAAGGAATTTATGTCATCCTCATACATTTTCTTGTACTTCGTCTCAACATCTGAAGAA                                                                                                                                         ]
[+] EMBL CB661799             [                    AACTTTGATTTCATTACTCAAGTTGTTTGACTTTATCCTTTTGGCATTTGTACAACCATCATTATCAGGCGTGCATTCATTTTACCCACAGAATTGACAATTAGTGATACAACAGTTTACATAATAACGGCTCAAACGCACGACCACGCCTCATCCTGTCATTTCCCATCCACCCCGTCTCCATATCTGGAAAATTTTTATCTACAGAAAACGTATTCAGACGTCTAATGGACATAAAGAATACATGTCAACTATGGCTTCAGTCATATGGTCCTATGCAAAGATTTCCTGAGATCAAACCCCAGATTTTGGTTTTCAGCGTGATGAAGTGATAATACCAGACACATGGAACTTCCATTTAGAGCGCATGTGGTAGCGTCTGATTGCCAGCGTCCAAGATGATTTCATCATTTGCAGGTGTTGTGCTGAGATAGCTCAAAGCTGACATTCTGTACAGCAATGTAAATACAAGGAGATGTAATCCAATAGTGTAGAAGAATATAAATGTCCGGGCATATTTGTTACCAAGGAGAAAACGTCCACTGCTAAGAGTGATTTTGTCTCTTAAACCAAGTTCCTTGTACCGTTGATCCTTTTCCTTCTTTGAAAAAGCAGCAAAAGG ATTTATGTCATCCTCATACATTTTCTTGTACTTCGTCTCAACATCTGAAGAACCACTTTCAACATCTTCTGCATACTTCTTTGGTCCTCTGGAAACAATCTTCTCATGGCTGTAGTCCTGCACGTAACGAATCTTCCCATACAGTTGAACATTATCTGCTTTAGTTTTTTCCAATTCTACAACTAGCAT]
[+] EMBL CB645049             [                       TTTGATTTCATTACTCAAGTTGTTTGACTTTATCCTTTTGGCATTTGTACAACCATCATTATCAGGCGTGCATTCATTTTACCCACAGAATTGACAATTAGTGATACAACAGTTTACATAATAACGGCTCAAACGCACGACCACGCCTCATCCTGTCATTTCCCATCCACCCCGTCTCCATATCTGGAAAATTTTTATCTACAGAAAACGTATTCAGACGTCTAATGGACATAAAGAATACATGTCAACTATGGCTTCAGTCATATGGTCCTATGCAAAGATTTCCTGAGATCAAACCCCAGATTTTGGTTTTCAGCGTGATGAAGTGATAATACCAGACACATGGAACTTCCATTTAGAGCGCATGTGGTAGCGTCTGATTGCCAGCGTCCAAGATGATTTCATCATTTGCAGGTGTTGTGCTGAGATAGCTCAAAGCTGACATTCTGTACAGCAATGTAAATACAAGGAGATGTAATCCAATAGTGTAGAAGAATATAAATGTCCGGGCATATTTGTTACCAAGGAGAAAACGTCCACTGCTAAGAGTGATTTTGTCTCTTAAACCAAGTTCCTTGTACCGTTGATCCTTTTCCTTCTTTGAAAAAGCAGCAAAAGG ATTTATGTCATCCTCATACATTTTCTTGTACTTCGTCTCAACATCTGAAGAACCACTTTCAACATCTTCTGCATACTTCTTTGGTCCTCTGGAAACAATCTTCTCATGGCTGTAGTCCTGCACGTAACGAATCTTCCCATACAGTTGAACATTATCTGCTTTAGTTTTTTCCAATTCTACAACTAGCA ]
[+] EMBL CA759202             [                  tttttTTTTTTTTCATTACTCAAGTTGTTTGACTTTATCCTTTTGGCATTTGTACAACCATCATTATCAGGCGTGCATTCATTTTACCCACAGAATTGACAATTAGGGATACAACAGTTTACATAATAACGGCTCAAACGCACGACCACGCCTCATCCTGGCATTTCCCATCCACCTCGTCTCCATATCTGGAAAATTTTTATCTACAGAAAACGTATTCAAACGTCTAAGGGACATAAAGAATACATGTCAACTATGGCTTCAGTCATATGGTCCTATGCAAAGATTTCCTGAGATCAAACCCCAAATTTTGGTTTTCAGCGTGATGAAGTGATAATACCAGACACATGGAACTTCCATTTAGAGCGCAGGTGGTAGCGTCTGATTGCCAGCGTCCAAAATGATTTCATCATTTGCAGGTGTTGTGCTGAGATAGCTCAAAGCTGACATTCTGTACAGCAATGTAAATACAAGGAGATGTAATCCAATAGTGTAGAAAAATATAAATGTCCGGGCATATTTGTTACCAAGGAGAAAACGTCCACTGCTAAAAGTGATTTTGTCTCTTAAACCAAGTTCCTTGGACCGTTGATCCTTTTCCTTCTTTGAAAAAGCAGCANAAGG ATTTATGTCATCCTCATACATTTTCTTGAACTTCGGCTC ACATCTG AGGACCACTTTCAACATC TCTGa                                                                                                                     ]


>consensus_7344#0 TTTTTTTTTTTGGTAGGGACAACTTTGATTTCATTACTCAAGTTGTTTGACTTTATCCTT TTGGCATTTGTACAACCATCATTATCAGGCGTGCATTCATTTTACCCACAGAATTGACAA TTAGTGATACAACAGTTTACATAATAACGGCTCAAACGCACGACCACGCCTCATCCTGTC ATTTCCCATCCACCCCGTCTCCATATCTGGAAAATTTTTATCTACAGAAAACGTATTCAG ACGTCTAATGGACATAAAGAATACATGTCAACTATGGCTTCAGTCATATGGTCCTATGCA AAGATTTCCTGAGATCAAACCCCAGATTTTGGTTTTCAGCGTGATGAAGTGATAATACCA GACACATGGAACTTCCATTTAGAGCGCATGTGGTAGCGTCTGATTGCCAGCGTCCAAGAT GATTTCATCATTTGCAGGTGTTGTGCTGAGATAGCTCAAAGCTGACATTCTGTACAGCAA TGTAAATACAAGGAGATGTAATCCAATAGTGTAGAAGAATATAAATGTCCGGGCATATTT GTTACCAAGGAGAAAACGTCCACTGCTAAGAGTGATTTTGTCTCTTAAACCAAGTTCCTT GTACCGTTGATCCTTTTCCTTCTTTGAAAAAGCAGCANAAGGATTTATGTCATCCTCATA CATTTTCTTGTACTTCGTCTCAACATCTGAAGAACCACTTTCAACATCTTCTGCATACTT CTTTGGTCCTCTGGAAACAATCTTCTCATGGCTGTAGTCCTGCACGTAACGAATCTTCCC ATACAGTTGAACATTATCTGCTTTAGTTTTTTCCAATTCTACAACTAGCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)