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Oryza sativa
cluster # 7374 cluster # 7374       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7374#0 length = 854 sequences # 4  

consensusID : consensus_7374#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 854
fasta sequence
                              [CATCACTAGCTCTCACTTAGCTCCAAGCTGAGCTGAGCTGAGCTTAGCCATGGGGTGCGCGGGCTCCAAGGACGTCACGGTGGCCGACGTCTACCGCCCGCCGCCGACGAGCGTCTCGCTGTTCGACATCAGCGCCATCGAGGAGCCCTGGCTCATCGCCACCGGCAAGAAGAACGACGAGGAGGAGGAGGAGGAGGATGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGGCAAGAAGCCGACCACCACCGTGATGCCGCTCCCGCTGCTCGACAAGCTCGACGGCTACGACCTCGCGCCGGCGTCGTGGTCGGAGGTCAGCAAGGCCCTGGAGGACATCAAGCCTGCGCTCAGCTCCAACACCACGACGACGGAGAACGCCAAGAAGAAGACCAAGAAGAAGAAGAAGAAGCAGCCTGCGCCGCCGCCGCAGCCACCGACGACGACGACGACGGTGCTGCCTGAGCCGGTGAAGGCGATCGAGGCAGCTGCCAAGAAGGCGGCGGCGGCGCCGTCCGCGCGTGGCGCTAACGAGGAGGTTGACAGGAGGCCTCCGCCGCCGGAGCTCACCGGGCGGCGCGTCGTTAAGGACAACCCTTTCCTGATGCGCGACCGCGAGAACAAGGGGAACGACGGCGGTGCCGCCGCCGCGGCGGCGA-G-GTGGCGGCGGAGGGACCCGTTCGAGGGGTACCCCGAGCGGCGGCCCCCGGGGGCATCCGGCGGCGGGGTGGTGCTGTACACCACG-ACGCTCCGCGGCGTGCGGCGCAGTTNCGAGGACTGCGAGCGCGCGCGGANANGCGGTGGAGGCGTGCGCCGAGGCCGTGTCGGCGGCGGGCGGATCNCCCGTCGTC]

[+] EMBL AU197695             [CATCACTAGCTCTCACTTAGCTCCAAGCTGAGCTGAGCTGAGCTTAGCCATGGGGTGCGCGGGCTCCAAGGACGTCACGGTGGCCGACGTCTACCGCCCGCCGCCGACGAGCGTCTCGCTGTTCGACATCAGCGCCATCGAGGAGCCCTGGCTCATCGCCACCGGCAAGAAGAACGACGAGGAGGAGGAGGAGGAGGATGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGGCAAGAAGCCGACCACCACCGTGATGCCGCTCCCGCTGCTCGACAAGCTCGACGGCTACGACCTCGCGCCGGCGTCGTGGTCGGAGGTCAGCAAGGCCCTGGAGGACATCAAGCCTGCGCTCAGCTCCAACACCACGACGACGGAGAACGCCAAGAAGAAGACCAAGAAGAAGAAGAAGAAGCAGCCTGCGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB681977             [                    CTCCACGCTGAGCTGAGCTGAGCTTAGCCATGGGGTGCGCGGGCTCCAAGGACGTCACGGTGGCCGACGTCTACCGCCCGCCGCCGACGAGCGTCTCGCTGTTCGACATCAGCGCCATCGAGGAGCCCTGGCTCATCGCCACCGGCAAGAAGAACGACGAGGAGGAGGAGGAGGAGGATGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGGCAAGAAGCCGACCACCACCGTGATGCCGCTCCCGCTGCTCGACAAGCTCGACGGCTACGACCTCGCGCCGGCGTCGTGGTCGGAGGTCAGCAAGGCCCTGGAGGACATCAAGCCTGCGCTCAGCTCCAACACCACGACGACGGAGAACGCCAAGAAGAAGACCAAGAAGAAGAAGAAGAAGCAGCCTGCGCCGCCGCCGCAGCCACCGACGACGACGACGACGGTGCTGCCTGAGCCGGTGAAGGCGATCGAGGCAGCTGCCAAGAAGGCGGCGGCGGCGCCGTCCGCGCGTGGCGCTAACGAGGAGGTTGACAGGAGGCCTCCGCCGCCGGAGCTCACCGGGCGGCGCGTCGTTAAGGACAACCCTTTCCTGATGCGCGACCGCGAGAACAAGGGGAACGACGGCGGTGCCGCCGCCGCGGCGGCGA G GTGGCGGCGGAGGGACCCGTTCGAGGGGTACCCCGAGCGGCGGCCCCCGGGGGCATCCGGCGGCGGGGTGGTGCTGTACACCACG ACGCTCCGCGGCG                                                                                             ]
[+] EMBL AU070258             [                                                                                                                                                                                                                                                                                                                                                                                                            CAAGAAGAAGAAGAAGAAGCAGCCTGNGCCGCCGCCGCAGCCACCGACGACGACGACGACGGTGCTGCCTGAGCCGGTGAAGGCGATCGAGGCAGCTGCCAAGAAGGCGGCGGCGGCGCC TCCGCGCGTGGCGCTAACGAGGAGGTTGACAGGAGGCCTCCGCCGCCGGAGCTCACCGGGCGGCGCGTCGTTAAGGACAANCCTTTCCTGATGCGCGACCG GAGAACAAGGGGAACGACGGCGGTGCCGCCGCCGCGGCGGCGANA GTGGCGGCGGAGGGACCCGTTCGAGGGGTACCCCGAGCGGCGGCCCCCGGGGGCATCCGGCGGCGGGGTGGTGCTGTACACCACG ANGCTCCG                                                                                                  ]
[+] EMBL AU075845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACCGGGCGGCGCGTCGTTAAGGACAACCCTTTCCTGATGCGCGACCGCGAGAACAAGGGGAACGACGGCGGTGCCGCCGCCGCGGCGGCCA GAGTGGCGGCGGAGGGACCCGTTCGAGGGGTACCCCGAGCGGCGGCCCCCGGGGGCATCCGGCGGCGGGGTGGTGCTGTACACCACGTACGCTCCGCGGCGTGCGGCGCAGTTNCGAGGACTGCGAGCGCGCGCGGANANGCGGTGGAGGCGTGCGCCGAGGCCGTGTCGGCGGCGGGCGGATCNCCCGTCGTC]


>consensus_7374#0 CATCACTAGCTCTCACTTAGCTCCAAGCTGAGCTGAGCTGAGCTTAGCCATGGGGTGCGC GGGCTCCAAGGACGTCACGGTGGCCGACGTCTACCGCCCGCCGCCGACGAGCGTCTCGCT GTTCGACATCAGCGCCATCGAGGAGCCCTGGCTCATCGCCACCGGCAAGAAGAACGACGA GGAGGAGGAGGAGGAGGATGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGGCAAGAA GCCGACCACCACCGTGATGCCGCTCCCGCTGCTCGACAAGCTCGACGGCTACGACCTCGC GCCGGCGTCGTGGTCGGAGGTCAGCAAGGCCCTGGAGGACATCAAGCCTGCGCTCAGCTC CAACACCACGACGACGGAGAACGCCAAGAAGAAGACCAAGAAGAAGAAGAAGAAGCAGCC TGCGCCGCCGCCGCAGCCACCGACGACGACGACGACGGTGCTGCCTGAGCCGGTGAAGGC GATCGAGGCAGCTGCCAAGAAGGCGGCGGCGGCGCCGTCCGCGCGTGGCGCTAACGAGGA GGTTGACAGGAGGCCTCCGCCGCCGGAGCTCACCGGGCGGCGCGTCGTTAAGGACAACCC TTTCCTGATGCGCGACCGCGAGAACAAGGGGAACGACGGCGGTGCCGCCGCCGCGGCGGC GAGGTGGCGGCGGAGGGACCCGTTCGAGGGGTACCCCGAGCGGCGGCCCCCGGGGGCATC CGGCGGCGGGGTGGTGCTGTACACCACGACGCTCCGCGGCGTGCGGCGCAGTTNCGAGGA CTGCGAGCGCGCGCGGANANGCGGTGGAGGCGTGCGCCGAGGCCGTGTCGGCGGCGGGCG GATCNCCCGTCGTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)