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Oryza sativa
cluster # 7381 cluster # 7381       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7381#0 length = 776 sequences # 4  

consensusID : consensus_7381#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 776
fasta sequence
                              [AAAAATTTTATCCACCTGAACTCGAAGATACCGTATTTGCGTCCCCTTTGCTTGCATTCCAATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGCCTAACTGTCCTATGCGCTAGTCGCCTCCGACCAAACGCGACAGCTTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGCTTAGCCTCTCACCGGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGCGGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCGGTCGGTCAGGGAGGAGAGGACCATCCACCTCATCCCGCTGCTCACCTTCCTCTGCTTCCTCCTCCTCTTCCTCTTCTCCCACGACCCTTCCTCCGCTGATATGTCGAGCTTCAGGGACGGAGGGAACGGTGGCAACAGGAGGCTGAGGATGCTGTAAACTTCTAGCATCAATTATTGTCAGCTATGTTTTTTTTTTCTGATCCGTTTTGCTTTGCGAATTTGGATCAGATTTTGTGCTGTATTTGCTCTCAAATATGCGACTGCGTACGCAGCTACTTAAGCAGCAGTAATTAGTATTTGTAATCTGCAACTTTATGCAATCTTTTGGTGAGTTCTTAAATCTTAATCGTTTGAATTGCCTCTGAAGAATAAGTCGGGGACATGGCATAAGGAGAATATATGCGGTTATATGCTCCTACCAAAAAAAAAAA]

[+] EMBL AK062960             [AAAAATTTTATCCACCTGAACTCGAAGATACCGTATTTGCGTCCCCTTTGCTTGCATTCCAATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGCCTAACTGTCCTATGCGCTAGTCGCCTCCGACCAAACGCGACAGCTTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGCTTAGCCTCTCACCGGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGCGGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCGGTCGGTCAGGGAGGAGAGGACCATCCACCTCATCCCGCTGCTCACCTTCCTCTGCTTCCTCCTCCTCTTCCTCTTCTCCCACGACCCTTCCTCCGCTGATATGTCGAGCTTCAGGGACGGAGGGAACGGTGGCAACAGGAGGCTGAGGATGCTGTAAACTTCTAGCATCAATTATTGTCAGCTATGTTTTTTTTTTCTGATCCGTTTTGCTTTGCGAATTTGGATCAGATTTTGTGCTGTATTTGCTCTCAAATATGCGACTGCGTACGCAGCTACTTAAGCAGCAGTAATTAGTATTTGTAATCTGCAACTTTATGCAATCTTTTGGTGAGTTCTTAAATCTTAATCGTTTGA                                                                             ]
[+] EMBL CA756769             [                        AAGATACAGTATTTGCGTCCCCTTTGCTTGCATTCCAATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGCCTAACTGTCCTATGAGCTAGTCGCCTCCGACCAAACGCGACAGCTTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGCTTAGCCTCTCACCGGGGCCGAAGCAGCAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSS5080A             [                                         TCCCCTTTGCTTGCATTCCAATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGCCTAACTGTCCTATGCGCTAGTCGNCTCCGACCAAACGCGACAG TTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAATTGCATCGGCAGCTTAGCCTCTCACCGGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGCGGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCNGTCGGTCAGGGAGGAGAGGACCATCCACCTCATCCCGCTGCTCAACTTNCTCTGCTTCCTCCTCCTCTT                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU097471             [                                                                                                                                                                 AGCTTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGNTTAGCCTNTNACCGGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGCGGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCGGTCGGTCAGGGAGGAGAGGACCATCCACCTCATCCCGCTGCTCACCTTCCTCTGCTTCCTCCTCCTCTTCCTCTTCTCCCACGACCCTTCCTCCGCTGATATGTCGAGCTTCAGGGACGGAGGGAACGGTGGCAACAGGAGGCTGAGGATGCTGTAAACTTCTAGCATCAATTATTGTCAGCTATGTTTTTTTTTTCTGATCCGTTTTGCTTTGCGAATTTGGATCAGATTTTGTGCTGTATTTGCTCTCAAATATGCGA TGCGTACGCAGCTACTTAAGCAGCAGTAATTAGTATTTGTAATCTGCAACTTTATGCAATCTTTTGGTGAGTTCTTAAATCTTAATCGTTTGAATTGCCTCTGAAGAATAAGTCGGGGACATGGCATAAGGAGAATATATGCGGTTATATGCTCCTACCAAAAAAAAAAA]


>consensus_7381#0 AAAAATTTTATCCACCTGAACTCGAAGATACCGTATTTGCGTCCCCTTTGCTTGCATTCC AATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGC CTAACTGTCCTATGCGCTAGTCGCCTCCGACCAAACGCGACAGCTTCATTTCAGATCAGA GACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGCTTAGCCTCTCACC GGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGC GGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCGGTCGGTCAGGGAGGA GAGGACCATCCACCTCATCCCGCTGCTCACCTTCCTCTGCTTCCTCCTCCTCTTCCTCTT CTCCCACGACCCTTCCTCCGCTGATATGTCGAGCTTCAGGGACGGAGGGAACGGTGGCAA CAGGAGGCTGAGGATGCTGTAAACTTCTAGCATCAATTATTGTCAGCTATGTTTTTTTTT TCTGATCCGTTTTGCTTTGCGAATTTGGATCAGATTTTGTGCTGTATTTGCTCTCAAATA TGCGACTGCGTACGCAGCTACTTAAGCAGCAGTAATTAGTATTTGTAATCTGCAACTTTA TGCAATCTTTTGGTGAGTTCTTAAATCTTAATCGTTTGAATTGCCTCTGAAGAATAAGTC GGGGACATGGCATAAGGAGAATATATGCGGTTATATGCTCCTACCAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)