cluster # 7381

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Oryza sativa
cluster # 7381 cluster # 7381 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7381#0 length = 776 sequences # 4

consensusID : consensus_7381#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 776
fasta sequence

                              [AAAAATTTTATCCACCTGAACTCGAAGATACCGTATTTGCGTCCCCTTTGCTTGCATTCCAATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGCCTAACTGTCCTATGCGCTAGTCGCCTCCGACCAAACGCGACAGCTTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGCTTAGCCTCTCACCGGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGCGGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCGGTCGGTCAGGGAGGAGAGGACCATCCACCTCATCCCGCTGCTCACCTTCCTCTGCTTCCTCCTCCTCTTCCTCTTCTCCCACGACCCTTCCTCCGCTGATATGTCGAGCTTCAGGGACGGAGGGAACGGTGGCAACAGGAGGCTGAGGATGCTGTAAACTTCTAGCATCAATTATTGTCAGCTATGTTTTTTTTTTCTGATCCGTTTTGCTTTGCGAATTTGGATCAGATTTTGTGCTGTATTTGCTCTCAAATATGCGACTGCGTACGCAGCTACTTAAGCAGCAGTAATTAGTATTTGTAATCTGCAACTTTATGCAATCTTTTGGTGAGTTCTTAAATCTTAATCGTTTGAATTGCCTCTGAAGAATAAGTCGGGGACATGGCATAAGGAGAATATATGCGGTTATATGCTCCTACCAAAAAAAAAAA]

[+] EMBL AK062960             [AAAAATTTTATCCACCTGAACTCGAAGATACCGTATTTGCGTCCCCTTTGCTTGCATTCCAATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGCCTAACTGTCCTATGCGCTAGTCGCCTCCGACCAAACGCGACAGCTTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGCTTAGCCTCTCACCGGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGCGGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCGGTCGGTCAGGGAGGAGAGGACCATCCACCTCATCCCGCTGCTCACCTTCCTCTGCTTCCTCCTCCTCTTCCTCTTCTCCCACGACCCTTCCTCCGCTGATATGTCGAGCTTCAGGGACGGAGGGAACGGTGGCAACAGGAGGCTGAGGATGCTGTAAACTTCTAGCATCAATTATTGTCAGCTATGTTTTTTTTTTCTGATCCGTTTTGCTTTGCGAATTTGGATCAGATTTTGTGCTGTATTTGCTCTCAAATATGCGACTGCGTACGCAGCTACTTAAGCAGCAGTAATTAGTATTTGTAATCTGCAACTTTATGCAATCTTTTGGTGAGTTCTTAAATCTTAATCGTTTGA                                                                             ]
[+] EMBL CA756769             [                        AAGATACAGTATTTGCGTCCCCTTTGCTTGCATTCCAATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGCCTAACTGTCCTATGAGCTAGTCGCCTCCGACCAAACGCGACAGCTTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGCTTAGCCTCTCACCGGGGCCGAAGCAGCAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSS5080A             [                                         TCCCCTTTGCTTGCATTCCAATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGCCTAACTGTCCTATGCGCTAGTCGNCTCCGACCAAACGCGACAG TTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAATTGCATCGGCAGCTTAGCCTCTCACCGGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGCGGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCNGTCGGTCAGGGAGGAGAGGACCATCCACCTCATCCCGCTGCTCAACTTNCTCTGCTTCCTCCTCCTCTT                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU097471             [                                                                                                                                                                 AGCTTCATTTCAGATCAGAGACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGNTTAGCCTNTNACCGGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGCGGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCGGTCGGTCAGGGAGGAGAGGACCATCCACCTCATCCCGCTGCTCACCTTCCTCTGCTTCCTCCTCCTCTTCCTCTTCTCCCACGACCCTTCCTCCGCTGATATGTCGAGCTTCAGGGACGGAGGGAACGGTGGCAACAGGAGGCTGAGGATGCTGTAAACTTCTAGCATCAATTATTGTCAGCTATGTTTTTTTTTTCTGATCCGTTTTGCTTTGCGAATTTGGATCAGATTTTGTGCTGTATTTGCTCTCAAATATGCGA TGCGTACGCAGCTACTTAAGCAGCAGTAATTAGTATTTGTAATCTGCAACTTTATGCAATCTTTTGGTGAGTTCTTAAATCTTAATCGTTTGAATTGCCTCTGAAGAATAAGTCGGGGACATGGCATAAGGAGAATATATGCGGTTATATGCTCCTACCAAAAAAAAAAA]




>consensus_7381#0
AAAAATTTTATCCACCTGAACTCGAAGATACCGTATTTGCGTCCCCTTTGCTTGCATTCC
AATTCAAACACCAGACCGAACGCCCGCTCCCATTTCCGCCGCATTTAAGCGCTCTCCGGC
CTAACTGTCCTATGCGCTAGTCGCCTCCGACCAAACGCGACAGCTTCATTTCAGATCAGA
GACCACCACGCTCCCCCGCCTACAAAGAGCCAAAATGCATCGGCAGCTTAGCCTCTCACC
GGGGCCGAAGCAGCAGCAGCACGACGACGGCGGCAACATCGGCATCGGCAGCGACGCGGC
GGAGGTGATGGCGGTGCCGGAGGAGTCGTCGGCGGCCAAGGGCCGGTCGGTCAGGGAGGA
GAGGACCATCCACCTCATCCCGCTGCTCACCTTCCTCTGCTTCCTCCTCCTCTTCCTCTT
CTCCCACGACCCTTCCTCCGCTGATATGTCGAGCTTCAGGGACGGAGGGAACGGTGGCAA
CAGGAGGCTGAGGATGCTGTAAACTTCTAGCATCAATTATTGTCAGCTATGTTTTTTTTT
TCTGATCCGTTTTGCTTTGCGAATTTGGATCAGATTTTGTGCTGTATTTGCTCTCAAATA
TGCGACTGCGTACGCAGCTACTTAAGCAGCAGTAATTAGTATTTGTAATCTGCAACTTTA
TGCAATCTTTTGGTGAGTTCTTAAATCTTAATCGTTTGAATTGCCTCTGAAGAATAAGTC
GGGGACATGGCATAAGGAGAATATATGCGGTTATATGCTCCTACCAAAAAAAAAAA

clustalw multiple alignements is not computed in this case