These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7382#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1126 fasta sequence [TCCATGGGGACATGGGGTGCGCGTCGTCCCGCTTCCACCGTGGTACGTACCGCGCCTAGTACGGTCGCTGCATGCACGCGCACGCATCGCATCCGCATTCCACCATCTTCTTCTTCCCCCCAACCCAACAACGGTTTTGGTGTTTCGCTCCGCCTTCCGCTTCCGCCGCTACGCGTTCGCCTCCCCTGCTCATCCTCTCCTCTCCTCTCCACTCCACCGCCACCGCCACCGCCACCGCCGCCGCCGCAACGCGTTCTCGCTTTCCGATCTCGCGGTGCGGGCGCCCACATGAGGTTCAGGTTCCGCAACAAGGCTGCGGCGGCGGGAGACGGCAGCCGGCCGGCCTCTTCTCCTCCTAACGCCGGCAAGTTCGCGGCGCCTGTTGCCGGCGGCGGAGGGGCGGCGGACGTCGCCGGCGAGAGCCCGGATCAGGACAGCACAAGGAATGGAAGCAAAGATGAATCGTTCTTCGAGGCAAGACCCTGGTTAGACTCCGACA-GTGAAGATGATTTCCACAGTGTGAGAGGAGATTTCACTCCATCAAGAGGCACCACCCCAGATCATCAGAGACAGTCACCATTCGCGGGGCGAATATCGGTGGACAGATCGGAGCCTTCTCTGATCGAGAAGAAGCAGAGGCTCCTCGAACTTCTCCAGGAGAAGCAGCAGTACGACGATGACAGCGTCGCTGATGTCGGTAGCGAGATCGAGAACGGCGCTGTCCATGCTGAAGAGTATCTGAAATCATCGAGGAAAGGCGCAAAGGCGAACAGGGCATCCAAGTCCAGGGGAGGCTGCTTCCCAAGCTCTTTTTGGAAGATCAAATTCAGGAGCTGCAGGAAGAAGAGAAAAGAGCAGAATGATTAGCTGAATTTTAGCAGCATTGTGATGTTGAATTTTGTTTTTCTACTTCCTGTGAAAATTGCTTTTTACGACAGCGAGGGGAATATATATACTTTTTACCCCTGAAATGCTTCAGCTGGAAACGACAAAAAGAAGTTTTGAAGTGGCCGCTTATTGTGCTGTAAAAAAACAAGCAATGCAAATATAATGTAGGGAAAAAGTATACATGTTTACTTGTTAATTGTCATTGATGATTTTGTTGGCAAAAAAAAAAAAAAAAAAA] [+] EMBL AK067334 [TCCATGGGGACATGGGGTGCGCGTCGTCCCGCTTCCACCGTGGTACGTACCGCGCCTAGTACGGTCGCTGCATGCACGCGCACGCATCGCATCCGCATTCCACCATCTTCTTCTTCCCCCCAACCCAACAACGGTTTTGGTGTTTCGCTCCGCCTTCCGCTTCCGCCGCTACGCGTTCGCCTCCCCTGCTCATCCTCTCCTCTCCTCTCCACTCCACCGCCACCGCCACCGCCACCGCCGCCGCCGCAACACGTTCTCGCTTTCCGATCTCGCGGTGCGGGCGCCCACATGAGGTTCAGGTTCCGCAACAAGGCTGCGGCGGCGGGAGACGGCAGCCGGCCGGCCTCTTCTCCTCCTAACGCCGGCAAGTTCGCGGCGCCTGTTGCCGGCGGCGGAGGGGCGGCGGACGTCGCCGGCGAGAGCCCGGATCAGGACAGCACAAGGAATGGAAGCAAAGATGAATCGTTCTTCGAGGCAAGACCCTGGTTAGACTCCGACA GTGAAGATGATTTCCACAGTGTGAGAGGAGATTTCACTCCATCAAGAGGCACCACCCCAGATCATCAGAGACAGTCACCATTCGCGGGGCGAATATCGGTGGACAGATCGGAGCCTTCTCTGATCGAGAAGAAGCAGAGGCTCCTCGAACTTCTCCAGGAGAAGCAGCAGTACGACGATGACAGCGTCGCTGATGTCGGTAGCGAGATCGAGAACGGCGCTGTCCATGCTGAAGAGTATCTGAAATCATCGAGGAAAGGCGCAAAGGCGAACAGGGCATCCAAGTCCAGGGGAGGCTGCTTCCCAAGCTCTTTTTGGAAGATCAAATTCAGGAGCTGCAGGAAGAAGAGAAAAGAGCAGAATGATTAGCTGAATTTTAGCAGCATTGTGATGTTGAATTTTGTTTTTCTACTTCCTGTGAAAATTGCTTTTTACGACAGCGAGGGGAATATATATACTTTTTACCCCTGAAATGCTTCAGCTGGAAACGACAAAAAGAAGTTTTGAAGTGGCCGCTTATTGTGCTGTAAAAAAACAAGCAATGCAAATATAATGTAGGGAAAAAGTATA ] [+] EMBL AK104271 [ TTCCACCATCTTCTTCTTCCCCCCAACCCAACAACGGTTTTGGTGTTTCGCTCCGCCTTCCGCTTCCGCCGCTACGCGTTCGCCTCCCCTGCTCATCCTCTCCTCTCCTCTCCACTCCACCGCCACCGCCACCGCCACCGCCGCCGCCGCAACGCGTTCTCGCTTTCCGATCTCGCGGTGCGGGCGCCCACATGAGGTTCAGGTTCCGCAACAAGGCTGCGGCGGCGGGAGACGGCAGCCGGCCGGCCTCTTCTCCTCCTAACGCCGGCAAGTTCGCGGCGCCTGTTGCCGGCGGCGGAGGGGCGGCGGACGTCGCCGGCGAGAGCCCGGATCAGGACAGCACAAGGAATGGAAGCAAAGATGAATCGTTCTTCGAGGCAAGACCCTGGTTAGACTCCGACA GTGAAGATGATTTCCACAGTGTGAGAGGAGATTTCACTCCATCAAGAGGCACCACCCCAGATCATCAGAGACAGTCACCATTCGCGGGGCGAATATCGGTGGACAGATCGGAGCCTTCTCTGATCGAGAAGAAGCAGAGGCTCCTCGAACTTCTCCAGGAGAAGCAGCAGTACGACGATGACAGCGTCGCTGATGTCGGTAGCGAGATCGAGAACGGCGCTGTCCATGCTGAAGAGTATCTGAAATCATCGAGGAAAGGCGCAAAGGCGAACAGGGCATCCAAGTCCAGGGGAGGCTGCTTCCCAAGCTCTTTTTGGAAGATCAAATTCAGGAGCTGCAGGAAGAAGAGAAAAGAGCAGAATGATTAGCTGAATTTTAGCAGCATTGTGATGTTGAATTTTGTTTTTCTACTTCCTGTGAAAATTGCTTTTTACGACAGCGAGGGGAATATATATACTTTTTACCCCTGAAATGCTTCAGCTGGAAACGACAAAAAGAAGTTTTGAAGTGGCCGCTTATTGTGCTGTAAAAAAACAAGCAATGCAAATATAATGTAGGGAAAAAGTATACATGTTTACTTGTTAATTGTCATTGATGA ] [+] EMBL AK104769 [ TTCCACCATCTTCTTCTTCCCCCCAACCCAACAACGGTTTTGGTGTTTCGCTCCGCCTTCCGCTTCCGCCGCTACGCGTTCGCCTCCCCTGCTCATCCTCTCCTCTCCTCTCCACTCCACCGCCACCGCCACCGCCACCGCCGCCGCCGCAACGCGTTCTCGCTTTCCGATCTCGCGGTGCGGGCGCCCACATGAGGTTCAGGTTCCGCAACAAGGCTGCGGCGGCGGGAGACGGCAGCCGGCCGGCCTCTTCTCCTCCTAACGCCGGCAAGTTCGCGGCGCCTGTTGCCGGCGGCGGAGGGGCGGCGGACGTCGCCGGCGAGAGCCCGGATCAGGACAGCACAAGGAATGGAAGCAAAGATGAATCGTTCTTCGAGGCAAGACCCTGGTTAGACTCCGACA GTGAAGATGATTTCCACAGTGTGAGAGGAGATTTCACTCCATCAAGAGGCACCACCCCAGATCATCAGAGACAGTCACCATTCGCGGGGCGAATATCGGTGGACAGATCGGAGCCTTCTCTGATCGAGAAGAAGCAGAGGCTCCTCGAACTTCTCCAGGAGAAGCAGCAGTACGACGATGACAGCGTCGCTGATGTCGGTAGCGAGATCGAGAACGGCGCTGTCCATGCTGAAGAGTATCTGAAATCATCGAGGAAAGGCGCAAAGGCGAACAGGGCATCCAAGTCCAGGGGAGGCTGCTTCCCAAGCTCTTTTTGGAAGATCAAATTCAGGAGCTGCAGGAAGAAGAGAAAAGAGCAGAATGATTAGCTGAATTTTAGCAGCATTGTGATGTTGAATTTTGTTTTTCTACTTCCTGTGAAAATTGCTTTTTACGACAGCGAGGGGAATATATATACTTTTTACCCCTGAAATGCTTCAGCTGGAAACGACAAAAAGAAGTTTTGAAGTGGCCGCTTATTGTGCTGTAAAAAAACAAGCAATGCAAATATAATGTAGGGAAAAAGTATACATGTTTACTTGTTAATTGTCATTGATGA ] [-] EMBL CA762198 [ CGTTCTTTGAGGCAAGACCCTGGTTAGACTCCGACACGTGTAGATGATTTCCACAGTGTGAGAGGAGATTTCACTCCATCAAGAGGCACCACCCCAGATCATCAGAGACAGTCATCATTCGCGGGGCGGATATCGGTGGACAGATCAGAGCCTTCTTTGATCGAGAAGAAGCAGAGGCTCCTCGAACTTCTCCAGGAGAAGCAGCAGTACGACGATGACAGCGTCGCTGACGTCGGTAGCGAGATCGAGAACGGCGCTGTCCATGCTGAAGAGTATCTGAAATCATCGAGGAAAGGCGCGAAGGCGAACAGGGCATCCAAGTCCAAGGGAGGCTGCTTCCCAAGCTCTTTTTGGAAGATCAAATTCCGGAGCTGCAGGAAGAAGAGAAAAGAGCAGAATGATTAGCTGAA TTTAGCAGCATTGTGATGTCGATTTTTGTTTTTCTACTTCCTGTGAAAATTGCTTTTTACGAGAGCGAGGGGAATATATATACATTTTACCCCTGAAATGCTTTAGCTGGAAATGGCGAAAAGAAGTTTTGAAGTGGCCACTTATTATGCTGTAAAAAAACAAGCAATGCAAATATAATGTAGGGTAAAAGTATACATGTTTACTTGTTAATTGTCATTGATGATTTTGTTGGCAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||