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Oryza sativa
cluster # 7396 cluster # 7396       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7396#0 length = 2424 sequences # 2  
consensus_7396#1 length = 1967 sequences # 2  

consensusID : consensus_7396#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2424
fasta sequence
                              [CCAACCCAAGGTCGTCCTCTCCCTCTCCTCCGCCGCTTCGCCGCCGGCGTCCGTCGCCGCCGAGCTCACCGCCCTTCGCCGCCTCCACGGCGGGGCGCCGCCGTAGAATCTCCACACCGAGGCTCACATTCTACATCTTTGGAAATGCATCCCCCTCTAACCTTACACAGGCATCCTATGTGTGCCGAGATTATTGAAGCATTCCAGAAGTGCCATGTGGACCATCCCGTCAAGAAGTTTTTTGGCGAATGCACAGATCTTAAGATTAAGCTAGATCAGTGCTTCCGGCAAGAGAAAGCTTTGAAGAGAAAGGCAAACTTTGAAGAGAGCAAGAAGTTCAAAGAACAGTTGCTGGCCTATAAAAAGGAAATGGCTGAACAAGACAAGGAATCATAACGTGAGACAGAGGACAAGAACCTGAATCAAATGTTTTCCCCTACAATGCAATGACTCCAACTTTGTGAAGAAGTTGCAAATTGTCTTTACTTGGCATGCGCTTTTACTATCTTTACTGTTTAAAAGGTTGCCATTGATGAACTATAGCCAGATAATAAATTGCAGTTTAGAACTTCTTATTCTCTCATGTGTCTACGTTACTTATGTTTGGTCATTTTCTTCAGTACTGTTGGAAGCCCTATAGCAGATATAGACTGCAAGTCTTGCTCTAGGTGTGATATAACATTTTTTTAAAATAAATGAGATCCTTCAGCTTCTAGCATTATTTGTAGAAAAAACCTTTTAGGGTAAGGGTTGCCACTTGCCAGAGAATTATCATGCTTACATGTCACTTTAACAATGTTGAAGACTCGATTTTATCATAATATCATCTGTGACTTCCACTAGCTGTTAACATGTTGACATTATTGAGGAGGTTATGTGGTCAATATCTGAGGTGATATTTGGCATTGACGCATAAACTATTGCCTTTTCTGGTGATGGCTATATTAACTATCATTGATAAATACATTCACTTGCATTAATAATCTCTCATATTTTGAAAGCAATCTACAGGAACAAGGACAACTATGTTATTTGCCCTTTCAAGTTTCAAGTTAATCAAGACACTCGGACAAGCAGAGGAGCAGGTGAGAGGGAAAAGATGGATCCTGTTCCTCTTTTCAATCCTTGTGAAATGGGAAGATTCACTTTCTCACACAGAATTGTGTTGGCACCATTAACAAGAGCAAGATCATATGGCAATCTCCCACAATCACATGCCATACTGTACTACTCGCAACGGGCTACAAAAGGGGGACTTCTGATTTCAGAAGCCACAGGGGTGTCGTCTGATGCTCCATGCACAAACACCCCTGGGATATGGACCAAGGAACAAGTAGAGGCCTGGAAACCTGTCGTGGATGCTGTGCATGCAAAGGGCGGGATATTCTTCTGCCAGATTTGGCATGTAGGAAGAGCATCTGACTTAGAGCAAGAACCCATCTCAAGCACGGACAAGCCAGTGGAAAAGAATGAAGACATGGATTTCCCTGTCCCAAGACGCTTAGCTGTTGAAGAAATTCCTGATGTCATCAATCATTTCAGAATAGCTGCAAGAAATGCTATAGATGCTGGGTTTGACGGGGTCGAAGTTCACGGCGCGCATGGCTTCCTCCTCGAGCAGTTCATGAAAGACGGCGTCAACGACCGCGCCGACGAGTACGGGGGCAGCCTGCAGAACCGCTGCCGCTTCGCCCTCGAGGTCATCGATGCCGTGTCCACCGAGGTCGGTCCCGACCGCGTCGGGTTCCGCATCTCCCCTTACATCAGCTACTACGGCTGCCATGACTCCGACCCGGACGCGCTGGGCGTGTACATGGCCCGGGAGCTGGACAGGCGCGGCGTCCTGTACTGCAGCGCGGTGGAGCCCGAGATGGTCGCTGCGACAACAGTGGTGGACGGCGAGACGACGACGACGACGATGAGTAGGAGGATGATGATCCCGCATAGGCTGCACGGCATGAGGGAGGCCTTCAGGAGGGGGATGTTCATGGTCGGAGGAGGGTACGACAGGGATGCTGGGAACATGGCCGTGGCGTCTGGGTACGCCGACATGGTGGTGTTCGGTCGCCTGTTCCTGGCAAATCCTGACCTGCCGAGGAGGTTTCAGCTGGACGCGCCTCTGAACAAGTATGACCGGGCAACGTTCTATACCCATGACCCTGTGGTAGGGTACACGGACTACCCGTTTCTTGATGATGATCGTGAGGCGATGAGTGATCACACAGGCTGAGTGATGATACGGTGAAATTTTTACTCTGATAATAATACTGTGATCTTTGTGTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGGCCAGATTTCAGCTGTGGAAAGTAGGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAAAGGAGAGCTCCCTTTAAACTTTACAATACCGTTCATATAACTTCTAA]

[+] EMBL AK104938             [CCAACCCAAGGTCGTCCTCTCCCTCTCCTCCGCCGCTTCGCCGCCGGCGTCCGTCGCCGCCGAGCTCACCGCCCTTCGCCGCCTCCACGGCGGGGCGCCGCCGTAGAATCTCCACACCGAGGCTCACATTCTACATCTTTGGAAATGCATCCCCCTCTAACCTTACACAGGCATCCTATGTGTGCCGAGATTATTGAAGCATTCCAGAAGTGCCATGTGGACCATCCCGTCAAGAAGTTTTTTGGCGAATGCACAGATCTTAAGATTAAGCTAGATCAGTGCTTCCGGCAAGAGAAAGCTTTGAAGAGAAAGGCAAACTTTGAAGAGAGCAAGAAGTTCAAAGAACAGTTGCTGGCCTATAAAAAGGAAATGGCTGAACAAGACAAGGAATCATAACGTGAGACAGAGGACAAGAACCTGAATCAAATGTTTTCCCCTACAATGCAATGACTCCAACTTTGTGAAGAAGTTGCAAATTGTCTTTACTTGGCATGCGCTTTTACTATCTTTACTGTTTAAAAGGTTGCCATTGATGAACTATAGCCAGATAATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK067218             [                       TCTCCTCCGCCGCTTCGCCGCCGGCGTCCGTCGCCGCCGAGCTCACCGCCCTTCGCCGCCTCCACGGCGGGGCGCCGCCGTAGAATCTCCACACCGAGGCTCACATTCTACATCTTTGGAAATGCATCCCCCTCTAACCTTACACAGGCATCCTATGTGTGCCGAGATTATTGAAGCATTCCAGAAGTGCCATGTGGACCATCCCGTCAAGAAGTTTTTTGGCGAATGCACAGATCTTAAGATTAAGCTAGATCAGTGCTTCCGGCAAGAGAAAGCTTTGAAGAGAAAGGCAAACTTTGAAGAGAGCAAGAAGTTCAAAGAACAGTTGCTGGCCTATAAAAAGGAAATGGCTGAACAAGACAAGGAATCATAACGTGAGACAGAGGACAAGAACCTGAATCAAATGTTTTCCCCTACAATGCAATGACTCCAACTTTGTGAAGAAGTTGCAAATTGTCTTTACTTGGCATGCGCTTTTACTATCTTTACTGTTTAAAAGGTTGCCATTGATGAACTATAGCCAGATAATAAATTGCAGTTTAGAACTTCTTATTCTCTCATGTGTCTACGTTACTTATGTTTGGTCATTTTCTTCAGTACTGTTGGAAGCCCTATAGCAGATATAGACTGCAAGTCTTGCTCTAGGTGTGATATAACATTTTTTTAAAATAAATGAGATCCTTCAGCTTCTAGCATTATTTGTAGAAAAAACCTTTTAGGGTAAGGGTTGCCACTTGCCAGAGAATTATCATGCTTACATGTCACTTTAACAATGTTGAAGACTCGATTTTATCATAATATCATCTGTGACTTCCACTAGCTGTTAACATGTTGACATTATTGAGGAGGTTATGTGGTCAATATCTGAGGTGATATTTGGCATTGACGCATAAACTATTGCCTTTTCTGGTGATGGCTATATTAACTATCATTGATAAATACATTCACTTGCATTAATAATCTCTCATATTTTGAAAGCAATCTACAGGAACAAGGACAACTATGTTATTTGCCCTTTCAAGTTTCAAGTTAATCAAGACACTCGGACAAGCAGAGGAGCAGGTGAGAGGGAAAAGATGGATCCTGTTCCTCTTTTCAATCCTTGTGAAATGGGAAGATTCACTTTCTCACACAGAATTGTGTTGGCACCATTAACAAGAGCAAGATCATATGGCAATCTCCCACAATCACATGCCATACTGTACTACTCGCAACGGGCTACAAAAGGGGGACTTCTGATTTCAGAAGCCACAGGGGTGTCGTCTGATGCTCCATGCACAAACACCCCTGGGATATGGACCAAGGAACAAGTAGAGGCCTGGAAACCTGTCGTGGATGCTGTGCATGCAAAGGGCGGGATATTCTTCTGCCAGATTTGGCATGTAGGAAGAGCATCTGACTTAGAGCAAGAACCCATCTCAAGCACGGACAAGCCAGTGGAAAAGAATGAAGACATGGATTTCCCTGTCCCAAGACGCTTAGCTGTTGAAGAAATTCCTGATGTCATCAATCATTTCAGAATAGCTGCAAGAAATGCTATAGATGCTGGGTTTGACGGGGTCGAAGTTCACGGCGCGCATGGCTTCCTCCTCGAGCAGTTCATGAAAGACGGCGTCAACGACCGCGCCGACGAGTACGGGGGCAGCCTGCAGAACCGCTGCCGCTTCGCCCTCGAGGTCATCGATGCCGTGTCCACCGAGGTCGGTCCCGACCGCGTCGGGTTCCGCATCTCCCCTTACATCAGCTACTACGGCTGCCATGACTCCGACCCGGACGCGCTGGGCGTGTACATGGCCCGGGAGCTGGACAGGCGCGGCGTCCTGTACTGCAGCGCGGTGGAGCCCGAGATGGTCGCTGCGACAACAGTGGTGGACGGCGAGACGACGACGACGACGATGAGTAGGAGGATGATGATCCCGCATAGGCTGCACGGCATGAGGGAGGCCTTCAGGAGGGGGATGTTCATGGTCGGAGGAGGGTACGACAGGGATGCTGGGAACATGGCCGTGGCGTCTGGGTACGCCGACATGGTGGTGTTCGGTCGCCTGTTCCTGGCAAATCCTGACCTGCCGAGGAGGTTTCAGCTGGACGCGCCTCTGAACAAGTATGACCGGGCAACGTTCTATACCCATGACCCTGTGGTAGGGTACACGGACTACCCGTTTCTTGATGATGATCGTGAGGCGATGAGTGATCACACAGGCTGAGTGATGATACGGTGAAATTTTTACTCTGATAATAATACTGTGATCTTTGTGTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGGCCAGATTTCAGCTGTGGAAAGTAGGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAAAGGAGAGCTCCCTTTAAACTTTACAATACCGTTCATATAACTTCTAA]


>consensus_7396#0 CCAACCCAAGGTCGTCCTCTCCCTCTCCTCCGCCGCTTCGCCGCCGGCGTCCGTCGCCGC CGAGCTCACCGCCCTTCGCCGCCTCCACGGCGGGGCGCCGCCGTAGAATCTCCACACCGA GGCTCACATTCTACATCTTTGGAAATGCATCCCCCTCTAACCTTACACAGGCATCCTATG TGTGCCGAGATTATTGAAGCATTCCAGAAGTGCCATGTGGACCATCCCGTCAAGAAGTTT TTTGGCGAATGCACAGATCTTAAGATTAAGCTAGATCAGTGCTTCCGGCAAGAGAAAGCT TTGAAGAGAAAGGCAAACTTTGAAGAGAGCAAGAAGTTCAAAGAACAGTTGCTGGCCTAT AAAAAGGAAATGGCTGAACAAGACAAGGAATCATAACGTGAGACAGAGGACAAGAACCTG AATCAAATGTTTTCCCCTACAATGCAATGACTCCAACTTTGTGAAGAAGTTGCAAATTGT CTTTACTTGGCATGCGCTTTTACTATCTTTACTGTTTAAAAGGTTGCCATTGATGAACTA TAGCCAGATAATAAATTGCAGTTTAGAACTTCTTATTCTCTCATGTGTCTACGTTACTTA TGTTTGGTCATTTTCTTCAGTACTGTTGGAAGCCCTATAGCAGATATAGACTGCAAGTCT TGCTCTAGGTGTGATATAACATTTTTTTAAAATAAATGAGATCCTTCAGCTTCTAGCATT ATTTGTAGAAAAAACCTTTTAGGGTAAGGGTTGCCACTTGCCAGAGAATTATCATGCTTA CATGTCACTTTAACAATGTTGAAGACTCGATTTTATCATAATATCATCTGTGACTTCCAC TAGCTGTTAACATGTTGACATTATTGAGGAGGTTATGTGGTCAATATCTGAGGTGATATT TGGCATTGACGCATAAACTATTGCCTTTTCTGGTGATGGCTATATTAACTATCATTGATA AATACATTCACTTGCATTAATAATCTCTCATATTTTGAAAGCAATCTACAGGAACAAGGA CAACTATGTTATTTGCCCTTTCAAGTTTCAAGTTAATCAAGACACTCGGACAAGCAGAGG AGCAGGTGAGAGGGAAAAGATGGATCCTGTTCCTCTTTTCAATCCTTGTGAAATGGGAAG ATTCACTTTCTCACACAGAATTGTGTTGGCACCATTAACAAGAGCAAGATCATATGGCAA TCTCCCACAATCACATGCCATACTGTACTACTCGCAACGGGCTACAAAAGGGGGACTTCT GATTTCAGAAGCCACAGGGGTGTCGTCTGATGCTCCATGCACAAACACCCCTGGGATATG GACCAAGGAACAAGTAGAGGCCTGGAAACCTGTCGTGGATGCTGTGCATGCAAAGGGCGG GATATTCTTCTGCCAGATTTGGCATGTAGGAAGAGCATCTGACTTAGAGCAAGAACCCAT CTCAAGCACGGACAAGCCAGTGGAAAAGAATGAAGACATGGATTTCCCTGTCCCAAGACG CTTAGCTGTTGAAGAAATTCCTGATGTCATCAATCATTTCAGAATAGCTGCAAGAAATGC TATAGATGCTGGGTTTGACGGGGTCGAAGTTCACGGCGCGCATGGCTTCCTCCTCGAGCA GTTCATGAAAGACGGCGTCAACGACCGCGCCGACGAGTACGGGGGCAGCCTGCAGAACCG CTGCCGCTTCGCCCTCGAGGTCATCGATGCCGTGTCCACCGAGGTCGGTCCCGACCGCGT CGGGTTCCGCATCTCCCCTTACATCAGCTACTACGGCTGCCATGACTCCGACCCGGACGC GCTGGGCGTGTACATGGCCCGGGAGCTGGACAGGCGCGGCGTCCTGTACTGCAGCGCGGT GGAGCCCGAGATGGTCGCTGCGACAACAGTGGTGGACGGCGAGACGACGACGACGACGAT GAGTAGGAGGATGATGATCCCGCATAGGCTGCACGGCATGAGGGAGGCCTTCAGGAGGGG GATGTTCATGGTCGGAGGAGGGTACGACAGGGATGCTGGGAACATGGCCGTGGCGTCTGG GTACGCCGACATGGTGGTGTTCGGTCGCCTGTTCCTGGCAAATCCTGACCTGCCGAGGAG GTTTCAGCTGGACGCGCCTCTGAACAAGTATGACCGGGCAACGTTCTATACCCATGACCC TGTGGTAGGGTACACGGACTACCCGTTTCTTGATGATGATCGTGAGGCGATGAGTGATCA CACAGGCTGAGTGATGATACGGTGAAATTTTTACTCTGATAATAATACTGTGATCTTTGT GTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGGCCAGATTTCAGCTGTGGAAAGTA GGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAAAGGAGAGCTCCCTTTAAACTTTA CAATACCGTTCATATAACTTCTAA



consensusID : consensus_7396#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1967
fasta sequence
                              [TGAGGAGATTCAGATTTCTGACTCTCACAAGTCATCAGAAGCAACCTTTTGTCCATATTTTGATAATTTGTATGACTTTGGTTTTCTTATTTGTTATTGTTCTGTACCTTTTCTGTTCTTGGATGTTTTCATGCATCAATTATGCCACATCTGTTCTTGTTATGATTCGAAGTTTTCAGCAACACATCAGTCAGATATGTCACATCTGATTAACTTATGTATTTCATCATATATTTTTTGAATCCTATCTAATGTTCCTCAGCTTTTCTTTTTTCCTGAGATTTTTTCTCATATATACTCCATCCCATCTGTTCCTACTTCCTAGGTTCTTATATCTTGGGATGGAGGGAATAAAAAATATAGAACATATATGTCTTTTTCTTTTTTTTTAAAAAAGGTTGGGGGGCCTGGTCCCATTACCTTAACCACCACAAATTATTCTCCACCACTGGGTGACTGGGGTTCATTTATTTAATGTGTACCTCCATACCAGCATCACTTTATATGGATGGAGGACATGCGTGACACTGTGGCACCATCCCTTTAAGGCACTCAAAAAATTTAATCTGATTTTTGGTTGCATTGCTTCAAGAAATTTCCTGTCATATACAGACAAGCAGAGGAGCAGGTGAGAGGGAAAAGATGGATCCTGTTCCTCTTTTCAATCCTTGTGAAATGGGAAGATTCACTTTCTCACACAGAATTGTGTTGGCACCATTAACAAGAGCAAGATCATATGGCAATCTCCCACAATCACATGCCATACTGTACTACTCGCAACGGGCTACAAAAGGGGGACTTCTGATTTCAGAAGCCACAGGGGTGTCGTCTGATGCTCCATGCACAAACACCCCTGGGATATGGACCAAGGAACAAGTAGAGGCCTGGAAACCTGTCGTGGATGCTGTGCATGCAAAGGACGGGATATTCTTCTGCCAGATTTGGCATGTAGGAAGAGCATCTGACTTAGAGCAAGAACCCATCTCAAGCACGGACAAGCCAGTGGAAAAGAATGAAGACATGGATTTCCCTGTCCCAAGACGCTTAGCTGTTGAAGAAATTCCTGATGTCATCAATCATTTCAGAATAGCTGCAAGAAATGCTATAGATGCTGGGTTTGACGGGGTCGAAGTTCACGGCGCGCATGGCTTCCTCCTCGAGCAGTTCATGAAAGACGGCGTCAACGACCGCGCCGACGAGTACGGGGGCAGCCTGCAGAACCGCTGCCGCTTCGCCCTCGAGGTCATCGATGCCGTGTCCACCGAGGTCGGTCCCGACCGCGTCGGGTTCCGCATCTCCCCTTACATCAGCTACTACGGCTGCCATGACTCCGACCCGGACGCGCTGGGCGTGTACATGGCCCGGGAGCTGGACAGGCGCGGCGTCCTGTACTGCAGCGCGGTGGAGCCCGAGATGGTCGCTGCGACAACAGTGGTGGACGGCGAGACGACGACGACGACGATGAGTAGGAGGATGATGATCCCGCATAGGCTGCACGGCATGAGGGAGGCCTTCAGGAGGGGGATGTTCATGGTCGGAGGAGGGTACGACAGGGATGCTGGGAACATGGCCGTGGCGTCTGGGTACGCCGACATGGTGGTGTTCGGTCGCCTGTTCCTGGCAAATCCTGACCTGCCGAGGAGGTTTCAGCTGGACGCGCCCCTGAACAAGTATGACCGGGCAACGTTCTATACCCATGACCCTGTGGTAGGGTACACGGACTACCCGTTTCTTGATGATGATCGTGAGGCGATGAGTGATCACACAGGCTGAGTGATGATACGGTGAAATTTTTACTCTGATAATAATACTGTGATCTTTGTGTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGGCCAGATTTCAGCTGTGGAAAGTAGGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAAAGGAGAGCTCCCTTTAAACTTTACAATACCGTTCATATAACTTCTAA]

[+] EMBL AK073836             [TGAGGAGATTCAGATTTCTGACTCTCACAAGTCATCAGAAGCAACCTTTTGTCCATATTTTGATAATTTGTATGACTTTGGTTTTCTTATTTGTTATTGTTCTGTACCTTTTCTGTTCTTGGATGTTTTCATGCATCAATTATGCCACATCTGTTCTTGTTATGATTCGAAGTTTTCAGCAACACATCAGTCAGATATGTCACATCTGATTAACTTATGTATTTCATCATATATTTTTTGAATCCTATCTAATGTTCCTCAGCTTTTCTTTTTTCCTGAGATTTTTTCTCATATATACTCCATCCCATCTGTTCCTACTTCCTAGGTTCTTATATCTTGGGATGGAGGGAATAAAAAATATAGAACATATATGTCTTTTTCTTTTTTTTTAAAAAAGGTTGGGGGGCCTGGTCCCATTACCTTAACCACCACAAATTATTCTCCACCACTGGGTGACTGGGGTTCATTTATTTAATGTGTACCTCCATACCAGCATCACTTTATATGGATGGAGGACATGCGTGACACTGTGGCACCATCCCTTTAAGGCACTCAAAAAATTTAATCTGATTTTTGGTTGCATTGCTTCAAGAAATTTCCTGTCATATACAGACAAGCAGAGGAGCAGGTGAGAGGGAAAAGATGGATCCTGTTCCTCTTTTCAATCCTTGTGAAATGGGAAGATTCACTTTCTCACACAGAATTGTGTTGGCACCATTAACAAGAGCAAGATCATATGGCAATCTCCCACAATCACATGCCATACTGTACTACTCGCAACGGGCTACAAAAGGGGGACTTCTGATTTCAGAAGCCACAGGGGTGTCGTCTGATGCTCCATGCACAAACACCCCTGGGATATGGACCAAGGAACAAGTAGAGGCCTGGAAACCTGTCGTGGATGCTGTGCATGCAAAGGACGGGATATTCTTCTGCCAGATTTGGCATGTAGGAAGAGCATCTGACTTAGAGCAAGAACCCATCTCAAGCACGGACAAGCCAGTGGAAAAGAATGAAGACATGGATTTCCCTGTCCCAAGACGCTTAGCTGTTGAAGAAATTCCTGATGTCATCAATCATTTCAGAATAGCTGCAAGAAATGCTATAGATGCTGGGTTTGACGGGGTCGAAGTTCACGGCGCGCATGGCTTCCTCCTCGAGCAGTTCATGAAAGACGGCGTCAACGACCGCGCCGACGAGTACGGGGGCAGCCTGCAGAACCGCTGCCGCTTCGCCCTCGAGGTCATCGATGCCGTGTCCACCGAGGTCGGTCCCGACCGCGTCGGGTTCCGCATCTCCCCTTACATCAGCTACTACGGCTGCCATGACTCCGACCCGGACGCGCTGGGCGTGTACATGGCCCGGGAGCTGGACAGGCGCGGCGTCCTGTACTGCAGCGCGGTGGAGCCCGAGATGGTCGCTGCGACAACAGTGGTGGACGGCGAGACGACGACGACGACGATGAGTAGGAGGATGATGATCCCGCATAGGCTGCACGGCATGAGGGAGGCCTTCAGGAGGGGGATGTTCATGGTCGGAGGAGGGTACGACAGGGATGCTGGGAACATGGCCGTGGCGTCTGGGTACGCCGACATGGTGGTGTTCGGTCGCCTGTTCCTGGCAAATCCTGACCTGCCGAGGAGGTTTCAGCTGGACGCGCCCCTGAACAAGTATGACCGGGCAACGTTCTATACCCATGACCCTGTGGTAGGGTACACGGACTACCCGTTTCTTGATGATGATCGTGAGGCGATGAGTGATCACACAGGCTGAGTGATGATACGGTGAAATTTTTACTCTGATAATAATACTGTGATCTTTGTGTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGGCCAGATTTCAGCTGTGGAAAGTAGGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAAAGGAGAGCTCCCTTTAAACTTTACAATACCGTTCATATAACTTCTAA]
[+] EMBL CB660311             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGTGTTCGGTCGCCTGTTCCTGGCAAATCCTGACCTGCCGAGGAGGTTTCAGCTGGACGCGCCCCTGAACAAGTATGACCGGGCAACGTTCTATACCCATGACCCTGTGGTAGGGTACACGGACTACCCGTTTCTTGATGATGATCGTGAGGCGATGAGTGATCACACAGGCTGAGTGATGATACGGTGAAATTTTTACTCTGATAATAATACTGTGATCTTTGTGTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGGCCAGATTTCAGCTGTGGAAAGTAGGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAAAGGAGAGCTCCCTTTAAACTTTACAATACCGTTCATATAACTTCTAA]


>consensus_7396#1 TGAGGAGATTCAGATTTCTGACTCTCACAAGTCATCAGAAGCAACCTTTTGTCCATATTT TGATAATTTGTATGACTTTGGTTTTCTTATTTGTTATTGTTCTGTACCTTTTCTGTTCTT GGATGTTTTCATGCATCAATTATGCCACATCTGTTCTTGTTATGATTCGAAGTTTTCAGC AACACATCAGTCAGATATGTCACATCTGATTAACTTATGTATTTCATCATATATTTTTTG AATCCTATCTAATGTTCCTCAGCTTTTCTTTTTTCCTGAGATTTTTTCTCATATATACTC CATCCCATCTGTTCCTACTTCCTAGGTTCTTATATCTTGGGATGGAGGGAATAAAAAATA TAGAACATATATGTCTTTTTCTTTTTTTTTAAAAAAGGTTGGGGGGCCTGGTCCCATTAC CTTAACCACCACAAATTATTCTCCACCACTGGGTGACTGGGGTTCATTTATTTAATGTGT ACCTCCATACCAGCATCACTTTATATGGATGGAGGACATGCGTGACACTGTGGCACCATC CCTTTAAGGCACTCAAAAAATTTAATCTGATTTTTGGTTGCATTGCTTCAAGAAATTTCC TGTCATATACAGACAAGCAGAGGAGCAGGTGAGAGGGAAAAGATGGATCCTGTTCCTCTT TTCAATCCTTGTGAAATGGGAAGATTCACTTTCTCACACAGAATTGTGTTGGCACCATTA ACAAGAGCAAGATCATATGGCAATCTCCCACAATCACATGCCATACTGTACTACTCGCAA CGGGCTACAAAAGGGGGACTTCTGATTTCAGAAGCCACAGGGGTGTCGTCTGATGCTCCA TGCACAAACACCCCTGGGATATGGACCAAGGAACAAGTAGAGGCCTGGAAACCTGTCGTG GATGCTGTGCATGCAAAGGACGGGATATTCTTCTGCCAGATTTGGCATGTAGGAAGAGCA TCTGACTTAGAGCAAGAACCCATCTCAAGCACGGACAAGCCAGTGGAAAAGAATGAAGAC ATGGATTTCCCTGTCCCAAGACGCTTAGCTGTTGAAGAAATTCCTGATGTCATCAATCAT TTCAGAATAGCTGCAAGAAATGCTATAGATGCTGGGTTTGACGGGGTCGAAGTTCACGGC GCGCATGGCTTCCTCCTCGAGCAGTTCATGAAAGACGGCGTCAACGACCGCGCCGACGAG TACGGGGGCAGCCTGCAGAACCGCTGCCGCTTCGCCCTCGAGGTCATCGATGCCGTGTCC ACCGAGGTCGGTCCCGACCGCGTCGGGTTCCGCATCTCCCCTTACATCAGCTACTACGGC TGCCATGACTCCGACCCGGACGCGCTGGGCGTGTACATGGCCCGGGAGCTGGACAGGCGC GGCGTCCTGTACTGCAGCGCGGTGGAGCCCGAGATGGTCGCTGCGACAACAGTGGTGGAC GGCGAGACGACGACGACGACGATGAGTAGGAGGATGATGATCCCGCATAGGCTGCACGGC ATGAGGGAGGCCTTCAGGAGGGGGATGTTCATGGTCGGAGGAGGGTACGACAGGGATGCT GGGAACATGGCCGTGGCGTCTGGGTACGCCGACATGGTGGTGTTCGGTCGCCTGTTCCTG GCAAATCCTGACCTGCCGAGGAGGTTTCAGCTGGACGCGCCCCTGAACAAGTATGACCGG GCAACGTTCTATACCCATGACCCTGTGGTAGGGTACACGGACTACCCGTTTCTTGATGAT GATCGTGAGGCGATGAGTGATCACACAGGCTGAGTGATGATACGGTGAAATTTTTACTCT GATAATAATACTGTGATCTTTGTGTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGG CCAGATTTCAGCTGTGGAAAGTAGGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAA AGGAGAGCTCCCTTTAAACTTTACAATACCGTTCATATAACTTCTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7396#0      CCAACCCAAGGTCGTCCTCTCCCTCTCCTCCGCCGCTTCGCCGCCGGCGTCCGTCGCCGC 60
consensus_7396#1      ------------------------------------------------------------
                                                                                  

consensus_7396#0      CGAGCTCACCGCCCTTCGCCGCCTCCACGGCGGGGCGCCGCCGTAGAATCTCCACACCGA 120
consensus_7396#1      ------------------------------------------------------------
                                                                                  

consensus_7396#0      GGCTCACATTCTACATCTTTGGAAATGCATCCCCCTCTAACCTTACACAGGCATCCTATG 180
consensus_7396#1      ------------------------------------------------------------
                                                                                  

consensus_7396#0      TGTGCCGAGATTATTGAAGCATTCCAGAAGTGCCATGTGGACCATCCCGTCAAGAAGTTT 240
consensus_7396#1      ------------------------------------------------------------
                                                                                  

consensus_7396#0      TTTGGCGAATGCACAGATCTTAAGATTAAGCTAGATCAGTGCTTCCGGCAAGAGAAAGCT 300
consensus_7396#1      ------------------------------------------------------------
                                                                                  

consensus_7396#0      TTGAAGAGAAAGGCAAACTTTGAAGAGAGCAAGAAGTTCAAAGAACAGTTGCTGGCCTAT 360
consensus_7396#1      ------------------------------------------------------------
                                                                                  

consensus_7396#0      AAAAAGGAAATGGCTGAACAAGACAAGGAATCATAACGTGAGACAGAGGACAAGAACCTG 420
consensus_7396#1      ----------------------TGAGGAGATTCAGATTTCTGACTCTCACAAGTCATCAG 38
                                              * *  **    *  *  ***       *   * * *

consensus_7396#0      AATCAAATGTTTTCCCCTACAATG-CAATGACTCCAACTTTGTGAAGAAGTTGCAAATTG 479
consensus_7396#1      AAGCAACCTTTTGTCCATATTTTGATAATTTGTATGACTTTG-----GTTTTCTTATTTG 93
                      ** ***   ***  ** **   **  ***   *   ******        **   * ***

consensus_7396#0      TCTTTACTTGGCATGCGCTTTTACTATCTTTACTGTTTAAAAGGTTGCCATTGATGAACT 539
consensus_7396#1      TTATTGTTCTGTAC---CTTTTCTGTTCTTGGATGTTTTCATGCATCAATTATGCCACAT 150
                      *  **  *  * *    *****    ****   *****  * *  *    *     *  *

consensus_7396#0      ATAGCCAGATAATAAATTGCAGTTTAGAACTTCTTATTC-TCTCATGTGTCTACGTTACT 598
consensus_7396#1      CTGTTCTTGTTATGATTCGAAGTTTTCAGCAACACATCAGTCAGATATGTC-ACATCTGA 209
                       *   *   * ** * * * *****  * *  *  **   **  ** **** ** *    

consensus_7396#0      TATGTTTGGTCATTTTCTTCAGTACTGTTGGAAGCCCTATAGCAGATATAGACTGCAAGT 658
consensus_7396#1      TTAACTTATGTATTTCATCATATATTTTTTGAATCC---TATCTAATGT---TCCTCAGC 263
                      *    **    ****  *    ** * ** *** **   ** *  ** *        ** 

consensus_7396#0      CTTGCTCTAGGTGTGATATAACATTTTTTTAAAATAAATGAGATCCT-TCAGCTTCTAGC 717
consensus_7396#1      TTTTCTTTTTTCCTGAGAT----TTTTTCTCATATATACTCCATCCCATCTGTTCCTAC- 318
                       ** ** *     *** **    ***** * * *** *    ****  ** * * ***  

consensus_7396#0      ATTATTTGTAGAAAAAACCTTTTAGGGTAAGGGTTGCCACTTGCCAGAGAATTATCATGC 777
consensus_7396#1      -TTCCTAGGTTCTTATATCTTGGGATGGAGGGAATAAAAAATATAGAACATATATGTCTT 377
                       **  * *      * * ***     * * **  *   *  *     * *  ***     

consensus_7396#0      TTACATGTCACTTTAACAATGTTGAAGACTCGATTTTATCATAATATCATCTGTGACTTC 837
consensus_7396#1      TTTCTTTTTTTTTAAAAAAGGTTGGGGGGCCTGGTCC-------CATTACCT-TAACCAC 429
                      ** * * *   ** ** ** ****  *   *   *          ** * ** * **  *

consensus_7396#0      CACTAGCTGTTAACATGTTGACATTATTGAGGAGGTTATGTGGTCAATATCTGAGGTGAT 897
consensus_7396#1      CACAAATTATTCTC-------CACCACTGGG----------------TGACTGGGGTT-C 465
                      *** *  * **  *       **  * ** *                *  *** ***   

consensus_7396#0      ATTTGGCATTGACGCATAAACTATTGCCTTTTCTGGTGATGGCTATATTAACTATCATTG 957
consensus_7396#1      ATTTA--TTTAATGTGTA--------CCTCC-------ATACCAGCATCACTTTATATGG 508
                      ****    ** * *  **        ***         **  *   ** *  *   ** *

consensus_7396#0      ATAAATACATTCACTTGCATTAATAATCTCTCATATTTTGAAAGCAATCTACAGGAACAA 1017
consensus_7396#1      ATGGAGGA---CATGCGTGACACTGTGGCACCATCCCTTTAAGGCACTCAAAAAATTTAA 565
                      **  *      **   *    * *       ***   ** ** *** ** * *     **

consensus_7396#0      GGACAACTATGTTATTTGCCCTTTCAAGTTTCAAGTTAATCAAGACACTCGGACAAGCAG 1077
consensus_7396#1      TCTGATTTTTGGT-TGCATTGCTTCAAG----AAATTTCCTGTCATATACAGACAAGCAG 620
                          *  * ** * *       ******    ** **       * *  * *********

consensus_7396#0      AGGAGCAGGTGAGAGGGAAAAGATGGATCCTGTTCCTCTTTTCAATCCTTGTGAAATGGG 1137
consensus_7396#1      AGGAGCAGGTGAGAGGGAAAAGATGGATCCTGTTCCTCTTTTCAATCCTTGTGAAATGGG 680
                      ************************************************************

consensus_7396#0      AAGATTCACTTTCTCACACAGAATTGTGTTGGCACCATTAACAAGAGCAAGATCATATGG 1197
consensus_7396#1      AAGATTCACTTTCTCACACAGAATTGTGTTGGCACCATTAACAAGAGCAAGATCATATGG 740
                      ************************************************************

consensus_7396#0      CAATCTCCCACAATCACATGCCATACTGTACTACTCGCAACGGGCTACAAAAGGGGGACT 1257
consensus_7396#1      CAATCTCCCACAATCACATGCCATACTGTACTACTCGCAACGGGCTACAAAAGGGGGACT 800
                      ************************************************************

consensus_7396#0      TCTGATTTCAGAAGCCACAGGGGTGTCGTCTGATGCTCCATGCACAAACACCCCTGGGAT 1317
consensus_7396#1      TCTGATTTCAGAAGCCACAGGGGTGTCGTCTGATGCTCCATGCACAAACACCCCTGGGAT 860
                      ************************************************************

consensus_7396#0      ATGGACCAAGGAACAAGTAGAGGCCTGGAAACCTGTCGTGGATGCTGTGCATGCAAAGGG 1377
consensus_7396#1      ATGGACCAAGGAACAAGTAGAGGCCTGGAAACCTGTCGTGGATGCTGTGCATGCAAAGGA 920
                      *********************************************************** 

consensus_7396#0      CGGGATATTCTTCTGCCAGATTTGGCATGTAGGAAGAGCATCTGACTTAGAGCAAGAACC 1437
consensus_7396#1      CGGGATATTCTTCTGCCAGATTTGGCATGTAGGAAGAGCATCTGACTTAGAGCAAGAACC 980
                      ************************************************************

consensus_7396#0      CATCTCAAGCACGGACAAGCCAGTGGAAAAGAATGAAGACATGGATTTCCCTGTCCCAAG 1497
consensus_7396#1      CATCTCAAGCACGGACAAGCCAGTGGAAAAGAATGAAGACATGGATTTCCCTGTCCCAAG 1040
                      ************************************************************

consensus_7396#0      ACGCTTAGCTGTTGAAGAAATTCCTGATGTCATCAATCATTTCAGAATAGCTGCAAGAAA 1557
consensus_7396#1      ACGCTTAGCTGTTGAAGAAATTCCTGATGTCATCAATCATTTCAGAATAGCTGCAAGAAA 1100
                      ************************************************************

consensus_7396#0      TGCTATAGATGCTGGGTTTGACGGGGTCGAAGTTCACGGCGCGCATGGCTTCCTCCTCGA 1617
consensus_7396#1      TGCTATAGATGCTGGGTTTGACGGGGTCGAAGTTCACGGCGCGCATGGCTTCCTCCTCGA 1160
                      ************************************************************

consensus_7396#0      GCAGTTCATGAAAGACGGCGTCAACGACCGCGCCGACGAGTACGGGGGCAGCCTGCAGAA 1677
consensus_7396#1      GCAGTTCATGAAAGACGGCGTCAACGACCGCGCCGACGAGTACGGGGGCAGCCTGCAGAA 1220
                      ************************************************************

consensus_7396#0      CCGCTGCCGCTTCGCCCTCGAGGTCATCGATGCCGTGTCCACCGAGGTCGGTCCCGACCG 1737
consensus_7396#1      CCGCTGCCGCTTCGCCCTCGAGGTCATCGATGCCGTGTCCACCGAGGTCGGTCCCGACCG 1280
                      ************************************************************

consensus_7396#0      CGTCGGGTTCCGCATCTCCCCTTACATCAGCTACTACGGCTGCCATGACTCCGACCCGGA 1797
consensus_7396#1      CGTCGGGTTCCGCATCTCCCCTTACATCAGCTACTACGGCTGCCATGACTCCGACCCGGA 1340
                      ************************************************************

consensus_7396#0      CGCGCTGGGCGTGTACATGGCCCGGGAGCTGGACAGGCGCGGCGTCCTGTACTGCAGCGC 1857
consensus_7396#1      CGCGCTGGGCGTGTACATGGCCCGGGAGCTGGACAGGCGCGGCGTCCTGTACTGCAGCGC 1400
                      ************************************************************

consensus_7396#0      GGTGGAGCCCGAGATGGTCGCTGCGACAACAGTGGTGGACGGCGAGACGACGACGACGAC 1917
consensus_7396#1      GGTGGAGCCCGAGATGGTCGCTGCGACAACAGTGGTGGACGGCGAGACGACGACGACGAC 1460
                      ************************************************************

consensus_7396#0      GATGAGTAGGAGGATGATGATCCCGCATAGGCTGCACGGCATGAGGGAGGCCTTCAGGAG 1977
consensus_7396#1      GATGAGTAGGAGGATGATGATCCCGCATAGGCTGCACGGCATGAGGGAGGCCTTCAGGAG 1520
                      ************************************************************

consensus_7396#0      GGGGATGTTCATGGTCGGAGGAGGGTACGACAGGGATGCTGGGAACATGGCCGTGGCGTC 2037
consensus_7396#1      GGGGATGTTCATGGTCGGAGGAGGGTACGACAGGGATGCTGGGAACATGGCCGTGGCGTC 1580
                      ************************************************************

consensus_7396#0      TGGGTACGCCGACATGGTGGTGTTCGGTCGCCTGTTCCTGGCAAATCCTGACCTGCCGAG 2097
consensus_7396#1      TGGGTACGCCGACATGGTGGTGTTCGGTCGCCTGTTCCTGGCAAATCCTGACCTGCCGAG 1640
                      ************************************************************

consensus_7396#0      GAGGTTTCAGCTGGACGCGCCTCTGAACAAGTATGACCGGGCAACGTTCTATACCCATGA 2157
consensus_7396#1      GAGGTTTCAGCTGGACGCGCCCCTGAACAAGTATGACCGGGCAACGTTCTATACCCATGA 1700
                      ********************* **************************************

consensus_7396#0      CCCTGTGGTAGGGTACACGGACTACCCGTTTCTTGATGATGATCGTGAGGCGATGAGTGA 2217
consensus_7396#1      CCCTGTGGTAGGGTACACGGACTACCCGTTTCTTGATGATGATCGTGAGGCGATGAGTGA 1760
                      ************************************************************

consensus_7396#0      TCACACAGGCTGAGTGATGATACGGTGAAATTTTTACTCTGATAATAATACTGTGATCTT 2277
consensus_7396#1      TCACACAGGCTGAGTGATGATACGGTGAAATTTTTACTCTGATAATAATACTGTGATCTT 1820
                      ************************************************************

consensus_7396#0      TGTGTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGGCCAGATTTCAGCTGTGGAAA 2337
consensus_7396#1      TGTGTGTTTGGGTGATGGGCATTGCGACGTCAGATCGTGGCCAGATTTCAGCTGTGGAAA 1880
                      ************************************************************

consensus_7396#0      GTAGGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAAAGGAGAGCTCCCTTTAAACT 2397
consensus_7396#1      GTAGGTGATTGTGGACTTCTGGCGTCATGTGCAATGTAAAAGGAGAGCTCCCTTTAAACT 1940
                      ************************************************************

consensus_7396#0      TTACAATACCGTTCATATAACTTCTAA 2424
consensus_7396#1      TTACAATACCGTTCATATAACTTCTAA 1967
                      ***************************




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)